| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
Click here to switch to the map view.
The map label for this gene is smtA [C]
Identifier: 15892683
GI number: 15892683
Start: 723688
End: 725010
Strand: Reverse
Name: smtA [C]
Synonym: RC0760
Alternate gene names: 15892683
Gene position: 725010-723688 (Counterclockwise)
Preceding gene: 15892684
Following gene: 15892682
Centisome position: 57.14
GC content: 30.76
Gene sequence:
>1323_bases ATGAGAAATGTAAAGAAAACAAAAAATACTACAATTTCTAAAGACTTAGCAGAAGTACAAGAGCATTATCAAGATTATCC TTATCCTTTCAGAGACCCAAATCAAGAAAAAGAATATTTACTTGCAACATGCGGTGAGTTCTTAGGAGAATTAAACCATT TTCTATATCAAGGAAAAGAAAATTTTAATAATAATTTTAGATGCTTAATAGCAGGCGGCGGCACCGGTGATTCGACTATT TATCTTGCCGAGCAGTTAAAAGATAAAAATGCCGAAATAATATATCTAGATTTCAGCAAGCCTAGCATGGAAGTAGCACA AAAACGTGCAGAAGTACGAGGTCTTAAAAATATTAAATGGATTAATGATTCAATATTAAATATACCTAATCTAAAACTTG GAAAATTCGATTATATAAATTGTACCGGCGTGCTTCATCATTTAGCAAATCCTGATGAAGGTTTAAAAAATCTAAAAGAT TCTTTAAAGCCGACCGGCGGTATGGGTTTAATGGTATATGCTAAATACGGACGTACCGGTGTTTATCAAATTCAGGATTT AATGAAAATGATAAATAAAGATACTAAAAGCCGTATCGAAGAAGTAATGAACGGGAAGCTAATTCTAGATAATTTGCCTG CTACTAACTGGTATAAAAGAGGTTGGGAGTTATTTTCAGATTACCAAAATTTTGGTGACGTCGGAGTTTATGATATGTTC CTGAACAAACAGGATAGAGCCTATTCCGTTCCTGAGTTATATGAATTCGTAGAAAAAGCAAGCTTAAATTTTGTTGATTA TCTTGATCCTTTAGAGAAAATTTTATTAAGACCGGAAAATTATATAAAAGATTTTTCACTTCTACAAAAAGTTAAAAAGA TGGATAAAGTAACTAGAGAAGCAATTTCCGAAATACTTACCGGTAATATTACTAAACATGCATTTTACGTGTCAAATCAA AAAGATAGTGTAGCCTCTCTTGATGACCTTGATAATATACCGTACTTCCATAATATTGCCAATTTTGCTAAACAAATTTA TGAGCATTTGGAATCTAATCCTTCAGCAGTAAATAATGCTATTAATTTTACTATTAATAATGGGATATTAAATAATGTTA ATATCTCAATGTCGATATTTAGAAGCACTAAATATATTTTTAAATATATGGTAGAAGAGAAAAGTTTAAGAGAAATATTT GATGCGGTACGCAACGAATTAAACCAAGAAATACGCAATGAGGCCTTATTAAATGAAGTTAAAAACGTATGCATGCCATT ACTTAATACAAATGTGTTATTGTTAAAATCAAAGGATTGCTAG
Upstream 100 bases:
>100_bases TGGCAAGATAATTATACTATTCAATTAATTATAAAAGATATACTTCTAAAAGAGTAGATAGACTAAGTATATATAATAAC AACTTAAAAAATAATAATTT
Downstream 100 bases:
>100_bases AGTTACGTGGATTGATTCATCCGTCATTGCGAGAAGAGGTTACCAGGGTCGTCATGAGCTACGCAGCCGTAAGCTGTGCA GCAATCTCATGCAATAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MRNVKKTKNTTISKDLAEVQEHYQDYPYPFRDPNQEKEYLLATCGEFLGELNHFLYQGKENFNNNFRCLIAGGGTGDSTI YLAEQLKDKNAEIIYLDFSKPSMEVAQKRAEVRGLKNIKWINDSILNIPNLKLGKFDYINCTGVLHHLANPDEGLKNLKD SLKPTGGMGLMVYAKYGRTGVYQIQDLMKMINKDTKSRIEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVGVYDMF LNKQDRAYSVPELYEFVEKASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNITKHAFYVSNQ KDSVASLDDLDNIPYFHNIANFAKQIYEHLESNPSAVNNAINFTINNGILNNVNISMSIFRSTKYIFKYMVEEKSLREIF DAVRNELNQEIRNEALLNEVKNVCMPLLNTNVLLLKSKDC
Sequences:
>Translated_440_residues MRNVKKTKNTTISKDLAEVQEHYQDYPYPFRDPNQEKEYLLATCGEFLGELNHFLYQGKENFNNNFRCLIAGGGTGDSTI YLAEQLKDKNAEIIYLDFSKPSMEVAQKRAEVRGLKNIKWINDSILNIPNLKLGKFDYINCTGVLHHLANPDEGLKNLKD SLKPTGGMGLMVYAKYGRTGVYQIQDLMKMINKDTKSRIEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVGVYDMF LNKQDRAYSVPELYEFVEKASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNITKHAFYVSNQ KDSVASLDDLDNIPYFHNIANFAKQIYEHLESNPSAVNNAINFTINNGILNNVNISMSIFRSTKYIFKYMVEEKSLREIF DAVRNELNQEIRNEALLNEVKNVCMPLLNTNVLLLKSKDC >Mature_440_residues MRNVKKTKNTTISKDLAEVQEHYQDYPYPFRDPNQEKEYLLATCGEFLGELNHFLYQGKENFNNNFRCLIAGGGTGDSTI YLAEQLKDKNAEIIYLDFSKPSMEVAQKRAEVRGLKNIKWINDSILNIPNLKLGKFDYINCTGVLHHLANPDEGLKNLKD SLKPTGGMGLMVYAKYGRTGVYQIQDLMKMINKDTKSRIEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVGVYDMF LNKQDRAYSVPELYEFVEKASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTREAISEILTGNITKHAFYVSNQ KDSVASLDDLDNIPYFHNIANFAKQIYEHLESNPSAVNNAINFTINNGILNNVNISMSIFRSTKYIFKYMVEEKSLREIF DAVRNELNQEIRNEALLNEVKNVCMPLLNTNVLLLKSKDC
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2067c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 50780; Mature: 50780
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVKKTKNTTISKDLAEVQEHYQDYPYPFRDPNQEKEYLLATCGEFLGELNHFLYQGKE CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC NFNNNFRCLIAGGGTGDSTIYLAEQLKDKNAEIIYLDFSKPSMEVAQKRAEVRGLKNIKW CCCCCEEEEEEECCCCCCCEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEE INDSILNIPNLKLGKFDYINCTGVLHHLANPDEGLKNLKDSLKPTGGMGLMVYAKYGRTG CCHHHCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCH VYQIQDLMKMINKDTKSRIEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVGVYDMF HHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHH LNKQDRAYSVPELYEFVEKASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTRE HCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AISEILTGNITKHAFYVSNQKDSVASLDDLDNIPYFHNIANFAKQIYEHLESNPSAVNNA HHHHHHCCCCHHHEEEECCCCCCHHCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCC INFTINNGILNNVNISMSIFRSTKYIFKYMVEEKSLREIFDAVRNELNQEIRNEALLNEV EEEEECCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNVCMPLLNTNVLLLKSKDC HHHHHHHHCCCEEEEECCCC >Mature Secondary Structure MRNVKKTKNTTISKDLAEVQEHYQDYPYPFRDPNQEKEYLLATCGEFLGELNHFLYQGKE CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC NFNNNFRCLIAGGGTGDSTIYLAEQLKDKNAEIIYLDFSKPSMEVAQKRAEVRGLKNIKW CCCCCEEEEEEECCCCCCCEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEE INDSILNIPNLKLGKFDYINCTGVLHHLANPDEGLKNLKDSLKPTGGMGLMVYAKYGRTG CCHHHCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCH VYQIQDLMKMINKDTKSRIEEVMNGKLILDNLPATNWYKRGWELFSDYQNFGDVGVYDMF HHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHH LNKQDRAYSVPELYEFVEKASLNFVDYLDPLEKILLRPENYIKDFSLLQKVKKMDKVTRE HCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AISEILTGNITKHAFYVSNQKDSVASLDDLDNIPYFHNIANFAKQIYEHLESNPSAVNNA HHHHHHCCCCHHHEEEECCCCCCHHCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCC INFTINNGILNNVNISMSIFRSTKYIFKYMVEEKSLREIFDAVRNELNQEIRNEALLNEV EEEEECCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNVCMPLLNTNVLLLKSKDC HHHHHHHHCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3041005; 1901865 [H]