| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
Click here to switch to the map view.
The map label for this gene is 15892348
Identifier: 15892348
GI number: 15892348
Start: 421663
End: 422037
Strand: Reverse
Name: 15892348
Synonym: RC0425
Alternate gene names: NA
Gene position: 422037-421663 (Counterclockwise)
Preceding gene: 15892350
Following gene: 15892347
Centisome position: 33.26
GC content: 27.2
Gene sequence:
>375_bases ATGCTAAAAAATAACTATATATTAAAAATAGTTTTTTACAAAGGTTTATATGTCATTCTTAACTATCACCTACATTTTTC TCATTACAACAATATTTCTTTTTCGTCTGTATGGCTTAGGAAGTATTCTTTCGAGGGTTTTTTAAAAAGAACATTACAAA ATCTTTTACCAGAACAGCAGATTTTAGCTGTTATTATAGCATCTTTAATATTTGGGATTACATATTTTCAAGGCAGAATA ATAGCTTTACGCACTATATGCGGTTTTTTCTATGGTTATGCATATTATAAAACAGGCAAAATATTTATGCTCTGTGATAG TTCATTTCGGTCTAAATTTATGCCATGTATTATTATTTACTTATCCTGCTCTTAA
Upstream 100 bases:
>100_bases ATTTTATTGTTTTTTTTGATGATTATCTTTTATATTTTCTTTTTAAAATCCAATTATTATTTATTAAAAATCTCTATATT TAATAAATTTTCTATTTTTA
Downstream 100 bases:
>100_bases AACTTTGTGAAATAAGTGTAATTTTAATAGACAAAGTTATAGAGTTTTTTTATTTACAAATAGTAAACATAATAACTAAG TTTTATGAACAAAGACATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MLKNNYILKIVFYKGLYVILNYHLHFSHYNNISFSSVWLRKYSFEGFLKRTLQNLLPEQQILAVIIASLIFGITYFQGRI IALRTICGFFYGYAYYKTGKIFMLCDSSFRSKFMPCIIIYLSCS
Sequences:
>Translated_124_residues MLKNNYILKIVFYKGLYVILNYHLHFSHYNNISFSSVWLRKYSFEGFLKRTLQNLLPEQQILAVIIASLIFGITYFQGRI IALRTICGFFYGYAYYKTGKIFMLCDSSFRSKFMPCIIIYLSCS >Mature_124_residues MLKNNYILKIVFYKGLYVILNYHLHFSHYNNISFSSVWLRKYSFEGFLKRTLQNLLPEQQILAVIIASLIFGITYFQGRI IALRTICGFFYGYAYYKTGKIFMLCDSSFRSKFMPCIIIYLSCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14668; Mature: 14668
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNNYILKIVFYKGLYVILNYHLHFSHYNNISFSSVWLRKYSFEGFLKRTLQNLLPEQQ CCCCCEEEEEHHHCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH ILAVIIASLIFGITYFQGRIIALRTICGFFYGYAYYKTGKIFMLCDSSFRSKFMPCIIIY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCEEEEEECCHHHHHCCCEEEEE LSCS EECC >Mature Secondary Structure MLKNNYILKIVFYKGLYVILNYHLHFSHYNNISFSSVWLRKYSFEGFLKRTLQNLLPEQQ CCCCCEEEEEHHHCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH ILAVIIASLIFGITYFQGRIIALRTICGFFYGYAYYKTGKIFMLCDSSFRSKFMPCIIIY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCEEEEEECCHHHHHCCCEEEEE LSCS EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA