Click here to switch to the map view.

The map label for this gene is 15892347

Identifier: 15892347

GI number: 15892347

Start: 420855

End: 421307

Strand: Reverse

Name: 15892347

Synonym: RC0424

Alternate gene names: NA

Gene position: 421307-420855 (Counterclockwise)

Preceding gene: 15892348

Following gene: 15892344

Centisome position: 33.21

GC content: 39.07

Gene sequence:

>453_bases
TTGCGAGGAAATTATGAAATAATTGATGAAGCAATCTCAGGAGTTTGTTATTATTTCATGAGATTGCCATACAGTCTACG
ACTGCTCGTAATGACGGGGTGGTATCCACGCAGGCAATGCCCAACCTACAATTTACTTGGATCAAAGCTAAAATTAATCT
CTTTCCAATGGTTAAAGCGTGCAGAGTCAAGATGTTCGATAGGGCTCGCTTGCCATACCGCTCTAATTGCATTATCTACC
AAAGCTTCACAAACACTAGCCGGAATATTAGGACAGATTTTTTTGTTAACCTTTGCCTGCTCAACATTACCTGCTTTATC
TAGCGTAATACTAATAATGACTTTTACCTTATTATTACCTCTAACTCCTGCCGGTACATTACTCCAATGTCTTTCAATCT
GTCTTTTTATCAAAGATGTTTCACTATCGGAAAGAGGCAGCCCATCCGTATAA

Upstream 100 bases:

>100_bases
GGTGATCACCACGAACATGATGAATAATATTTTTTAATTATTGCATGGTTCTTAATGTCATTCCTGCGAAAGGCTTGCCT
ACGTTGCTCGAAAATAATCA

Downstream 100 bases:

>100_bases
ACCCCTTTAGCTTCTTGTGCATTATCAGCTTTTTTTGACCTTTGATGCTTATTAGATTTTACATTATCCCCTTCTGAAGA
TTGCTCTAAATGCTTCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRGNYEIIDEAISGVCYYFMRLPYSLRLLVMTGWYPRRQCPTYNLLGSKLKLISFQWLKRAESRCSIGLACHTALIALST
KASQTLAGILGQIFLLTFACSTLPALSSVILIMTFTLLLPLTPAGTLLQCLSICLFIKDVSLSERGSPSV

Sequences:

>Translated_150_residues
MRGNYEIIDEAISGVCYYFMRLPYSLRLLVMTGWYPRRQCPTYNLLGSKLKLISFQWLKRAESRCSIGLACHTALIALST
KASQTLAGILGQIFLLTFACSTLPALSSVILIMTFTLLLPLTPAGTLLQCLSICLFIKDVSLSERGSPSV
>Mature_150_residues
MRGNYEIIDEAISGVCYYFMRLPYSLRLLVMTGWYPRRQCPTYNLLGSKLKLISFQWLKRAESRCSIGLACHTALIALST
KASQTLAGILGQIFLLTFACSTLPALSSVILIMTFTLLLPLTPAGTLLQCLSICLFIKDVSLSERGSPSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16574; Mature: 16574

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGNYEIIDEAISGVCYYFMRLPYSLRLLVMTGWYPRRQCPTYNLLGSKLKLISFQWLKR
CCCCHHHHHHHHHHHHHHHHHCCHHHEEHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
AESRCSIGLACHTALIALSTKASQTLAGILGQIFLLTFACSTLPALSSVILIMTFTLLLP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LTPAGTLLQCLSICLFIKDVSLSERGSPSV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRGNYEIIDEAISGVCYYFMRLPYSLRLLVMTGWYPRRQCPTYNLLGSKLKLISFQWLKR
CCCCHHHHHHHHHHHHHHHHHCCHHHEEHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
AESRCSIGLACHTALIALSTKASQTLAGILGQIFLLTFACSTLPALSSVILIMTFTLLLP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LTPAGTLLQCLSICLFIKDVSLSERGSPSV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA