| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
Click here to switch to the map view.
The map label for this gene is 15892290
Identifier: 15892290
GI number: 15892290
Start: 365037
End: 365516
Strand: Reverse
Name: 15892290
Synonym: RC0367
Alternate gene names: NA
Gene position: 365516-365037 (Counterclockwise)
Preceding gene: 15892298
Following gene: 15892289
Centisome position: 28.81
GC content: 27.92
Gene sequence:
>480_bases ATGAGCAATACTTTAAGTAATGAATCATATACTAATTTAATTAAAAATTTAAAACAAGAAATTAGCAAAGCTCGTATTAG AGCCCATTTAGCAGCAAATAAAGAATTGATAGTTCTTTATTGGCATATAGGAAACTTAATTTTAGAACGTCAGAATAAAG AAAAATGGGGATCAAAAGTGATTCAAAATATTTCTGATGATTTGCGTAAAGAATTTCCTAAAATGAAAGGATTATCATAT CAAAACCTTTCTTATATGCGTCAGTTTTTTGCAGAATATAATAATGACCAAATTCTCCAACAGGCGGTTGGAGAAATCCC ATGGAGTCATAATATTATTATTTTGTCAAAACTAAACAATATAAATCAAAGAATTTGGTATGCACAACAAACCATCGAAA ATGGTTGGTCAAGAAATGTATTATCTTGGCAAATTAAAAGTAATTTACATGAAAGGTCAGCGAAAAAAAGGTATAAATAA
Upstream 100 bases:
>100_bases TGAAACTTCCGATACTAAAGGAGTGCTTGACGGTGACCTTGAAGAATTTGTTTCCGCACACCTTGCTATGAATGTGGGTG GTAAGAAGTAGTGAAAATCA
Downstream 100 bases:
>100_bases CTTTTCCAATACTTTACCTGAGCTACAGTCCGATTTAGCCAGGTCGATTATAAAAGAACCGTATAACTTAGACTTTTTAG ATATTCAAGGTAAAATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSNTLSNESYTNLIKNLKQEISKARIRAHLAANKELIVLYWHIGNLILERQNKEKWGSKVIQNISDDLRKEFPKMKGLSY QNLSYMRQFFAEYNNDQILQQAVGEIPWSHNIIILSKLNNINQRIWYAQQTIENGWSRNVLSWQIKSNLHERSAKKRYK
Sequences:
>Translated_159_residues MSNTLSNESYTNLIKNLKQEISKARIRAHLAANKELIVLYWHIGNLILERQNKEKWGSKVIQNISDDLRKEFPKMKGLSY QNLSYMRQFFAEYNNDQILQQAVGEIPWSHNIIILSKLNNINQRIWYAQQTIENGWSRNVLSWQIKSNLHERSAKKRYK >Mature_158_residues SNTLSNESYTNLIKNLKQEISKARIRAHLAANKELIVLYWHIGNLILERQNKEKWGSKVIQNISDDLRKEFPKMKGLSYQ NLSYMRQFFAEYNNDQILQQAVGEIPWSHNIIILSKLNNINQRIWYAQQTIENGWSRNVLSWQIKSNLHERSAKKRYK
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18919; Mature: 18788
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTLSNESYTNLIKNLKQEISKARIRAHLAANKELIVLYWHIGNLILERQNKEKWGSKV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCHHHHHHHH IQNISDDLRKEFPKMKGLSYQNLSYMRQFFAEYNNDQILQQAVGEIPWSHNIIILSKLNN HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCC INQRIWYAQQTIENGWSRNVLSWQIKSNLHERSAKKRYK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNTLSNESYTNLIKNLKQEISKARIRAHLAANKELIVLYWHIGNLILERQNKEKWGSKV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCHHHHHHHH IQNISDDLRKEFPKMKGLSYQNLSYMRQFFAEYNNDQILQQAVGEIPWSHNIIILSKLNN HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCC INQRIWYAQQTIENGWSRNVLSWQIKSNLHERSAKKRYK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA