| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is yhcG [H]
Identifier: 15892289
GI number: 15892289
Start: 364763
End: 365137
Strand: Reverse
Name: yhcG [H]
Synonym: RC0366
Alternate gene names: 15892289
Gene position: 365137-364763 (Counterclockwise)
Preceding gene: 15892290
Following gene: 15892288
Centisome position: 28.78
GC content: 28.8
Gene sequence:
>375_bases ATGCACAACAAACCATCGAAAATGGTTGGTCAAGAAATGTATTATCTTGGCAAATTAAAAGTAATTTACATGAAAGGTCA GCGAAAAAAAGGTATAAATAACTTTTCCAATACTTTACCTGAGCTACAGTCCGATTTAGCCAGGTCGATTATAAAAGAAC CGTATAACTTAGACTTTTTAGATATTCAAGGTAAAATAATAGAACGAGATTTAGAAAATCAATTGATAGATAATATTAAA AACTTTTTATTAGAGTTAGGACAAGGTTTTGCATTTGTTGGCAATCAGTATCATATAGAACTTGAGGGAGAAGATTATTA TTTGGATTTAGTTTTTTATCACATAAAACTCAAATGCTATGTATGTTGTTATTGA
Upstream 100 bases:
>100_bases AATAATGACCAAATTCTCCAACAGGCGGTTGGAGAAATCCCATGGAGTCATAATATTATTATTTTGTCAAAACTAAACAA TATAAATCAAAGAATTTGGT
Downstream 100 bases:
>100_bases ATTAAAAACCGGCAAGTTTAAGCCGGAATATGCCGGTAAACTAAATTTTTATCTTAATTTAATGGAGCGCACAATTAAAG ATAATTCGGACAATCCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MHNKPSKMVGQEMYYLGKLKVIYMKGQRKKGINNFSNTLPELQSDLARSIIKEPYNLDFLDIQGKIIERDLENQLIDNIK NFLLELGQGFAFVGNQYHIELEGEDYYLDLVFYHIKLKCYVCCY
Sequences:
>Translated_124_residues MHNKPSKMVGQEMYYLGKLKVIYMKGQRKKGINNFSNTLPELQSDLARSIIKEPYNLDFLDIQGKIIERDLENQLIDNIK NFLLELGQGFAFVGNQYHIELEGEDYYLDLVFYHIKLKCYVCCY >Mature_124_residues MHNKPSKMVGQEMYYLGKLKVIYMKGQRKKGINNFSNTLPELQSDLARSIIKEPYNLDFLDIQGKIIERDLENQLIDNIK NFLLELGQGFAFVGNQYHIELEGEDYYLDLVFYHIKLKCYVCCY
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=74, Percent_Identity=37.8378378378378, Blast_Score=68, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 14624; Mature: 14624
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNKPSKMVGQEMYYLGKLKVIYMKGQRKKGINNFSNTLPELQSDLARSIIKEPYNLDFL CCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE DIQGKIIERDLENQLIDNIKNFLLELGQGFAFVGNQYHIELEGEDYYLDLVFYHIKLKCY ECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCEEEEEEEEEEEEEEE VCCY EEEC >Mature Secondary Structure MHNKPSKMVGQEMYYLGKLKVIYMKGQRKKGINNFSNTLPELQSDLARSIIKEPYNLDFL CCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE DIQGKIIERDLENQLIDNIKNFLLELGQGFAFVGNQYHIELEGEDYYLDLVFYHIKLKCY ECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCEEEEEEEEEEEEEEE VCCY EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]