| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892264
Identifier: 15892264
GI number: 15892264
Start: 341068
End: 342216
Strand: Reverse
Name: 15892264
Synonym: RC0341
Alternate gene names: NA
Gene position: 342216-341068 (Counterclockwise)
Preceding gene: 15892272
Following gene: 15892262
Centisome position: 26.97
GC content: 24.37
Gene sequence:
>1149_bases ATGACTTTAAAAAACGATTACAAAACTATTTTTTTCTCACTTTTGGGAATATTTATTTTTTCCTGTATCAATACTATAAA TTTTTATAATTTTAAAATCTTTTTACTGCTAAATAAAAATCTAGGCGGAGAACAAATAAATCATATCAATCAAACTAAAT TTATAGGTTCGATAATCGCAGGCTTTGCCTTAACACAGTTAATTAATAAGTTAAGTAATCAAAAAATTATTTTAATTAGC TTATCTTTATTAATTATTTGTACAATAAACCTAATTTTATTAAATAATTATACTCTAATTAAAATTAATTTTATTGTAAT TAATTTTGGAACATTTTCATATTTCACTTCTATAACATTAGATATTATTGAGAGTAGCAAAGAAAAGAAATATTTTTTTT TAGCTTGTATAATGTTGTTATGGGCAGGTGGAAACTTAATGGTAGATTTATTAAATCCATTTATAACACCGACAAATAAT ACTATAGTAATTTGTGCATTGTTATATTGTATCAATATACTAACCGAATTTCTGCATTATAATCCTACATCTCATAAATT AAATTTAAATTCCAAATTTTCATCCTTAATAAAAAATGTCGAATTACAATTATTGACAGGCTTCGTAGTTGCTTATGTCA CCTTGGATATATTATGGTATTATGAAGCTTTTGCATTAAAGAAAGAATTAGCATTAATTAATTTAAGACTTATACTAAAA TATATTTTTCTAGCAATATGTTTTTCTATAATTCCTATATGCTATATATTAAGCAAAGTAAATAAATATTTGGCTAATTT ATCACTAACTATAATTCTGCTCGTCTGCTTTATTTTACTACCGCTTCATGGAACTAATAAAAACCTTAATATATTATATA TAATACTAATCGGTAGTTGTTTAGGATCCATTTATATTTGCAATATTTTAATACTAATTGATAAATTTAGGGATTACGAA CTTAGAACAGCTTTATTTTCGTATTTTTCAATGTGCAGCATCGGTACATATGCCGGAGCTTTATCATCTCATGTACCTTA CGGCACTATTAACGGCAGTGATTTCTTATTTTCTGTTTGTGCCGTAGTCGGTAGTTTTGTAGCTTATCATTTTTGGTATT TTATTAAGTATACATTATATAGATTTTAA
Upstream 100 bases:
>100_bases TAATGGAATTATGAATCTCTTTAATTTTTAAGATAATAATCTTAATCATTATAATTATGAGTTATATACCATGTATTTAT GTTTAGCAAACACTTAATTT
Downstream 100 bases:
>100_bases TAAGACTTCTTGCATAACTTTCTAATAAAGGTAATTTGTACGTCCGGTACTCGAATCCTCACGTTACTTGCGTGTACGCT GCGGTTCTGCGTTCCGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MTLKNDYKTIFFSLLGIFIFSCINTINFYNFKIFLLLNKNLGGEQINHINQTKFIGSIIAGFALTQLINKLSNQKIILIS LSLLIICTINLILLNNYTLIKINFIVINFGTFSYFTSITLDIIESSKEKKYFFLACIMLLWAGGNLMVDLLNPFITPTNN TIVICALLYCINILTEFLHYNPTSHKLNLNSKFSSLIKNVELQLLTGFVVAYVTLDILWYYEAFALKKELALINLRLILK YIFLAICFSIIPICYILSKVNKYLANLSLTIILLVCFILLPLHGTNKNLNILYIILIGSCLGSIYICNILILIDKFRDYE LRTALFSYFSMCSIGTYAGALSSHVPYGTINGSDFLFSVCAVVGSFVAYHFWYFIKYTLYRF
Sequences:
>Translated_382_residues MTLKNDYKTIFFSLLGIFIFSCINTINFYNFKIFLLLNKNLGGEQINHINQTKFIGSIIAGFALTQLINKLSNQKIILIS LSLLIICTINLILLNNYTLIKINFIVINFGTFSYFTSITLDIIESSKEKKYFFLACIMLLWAGGNLMVDLLNPFITPTNN TIVICALLYCINILTEFLHYNPTSHKLNLNSKFSSLIKNVELQLLTGFVVAYVTLDILWYYEAFALKKELALINLRLILK YIFLAICFSIIPICYILSKVNKYLANLSLTIILLVCFILLPLHGTNKNLNILYIILIGSCLGSIYICNILILIDKFRDYE LRTALFSYFSMCSIGTYAGALSSHVPYGTINGSDFLFSVCAVVGSFVAYHFWYFIKYTLYRF >Mature_381_residues TLKNDYKTIFFSLLGIFIFSCINTINFYNFKIFLLLNKNLGGEQINHINQTKFIGSIIAGFALTQLINKLSNQKIILISL SLLIICTINLILLNNYTLIKINFIVINFGTFSYFTSITLDIIESSKEKKYFFLACIMLLWAGGNLMVDLLNPFITPTNNT IVICALLYCINILTEFLHYNPTSHKLNLNSKFSSLIKNVELQLLTGFVVAYVTLDILWYYEAFALKKELALINLRLILKY IFLAICFSIIPICYILSKVNKYLANLSLTIILLVCFILLPLHGTNKNLNILYIILIGSCLGSIYICNILILIDKFRDYEL RTALFSYFSMCSIGTYAGALSSHVPYGTINGSDFLFSVCAVVGSFVAYHFWYFIKYTLYRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43647; Mature: 43516
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKNDYKTIFFSLLGIFIFSCINTINFYNFKIFLLLNKNLGGEQINHINQTKFIGSIIA CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH GFALTQLINKLSNQKIILISLSLLIICTINLILLNNYTLIKINFIVINFGTFSYFTSITL HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHH DIIESSKEKKYFFLACIMLLWAGGNLMVDLLNPFITPTNNTIVICALLYCINILTEFLHY HHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC NPTSHKLNLNSKFSSLIKNVELQLLTGFVVAYVTLDILWYYEAFALKKELALINLRLILK CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIFLAICFSIIPICYILSKVNKYLANLSLTIILLVCFILLPLHGTNKNLNILYIILIGSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHH LGSIYICNILILIDKFRDYELRTALFSYFSMCSIGTYAGALSSHVPYGTINGSDFLFSVC HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AVVGSFVAYHFWYFIKYTLYRF HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLKNDYKTIFFSLLGIFIFSCINTINFYNFKIFLLLNKNLGGEQINHINQTKFIGSIIA CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH GFALTQLINKLSNQKIILISLSLLIICTINLILLNNYTLIKINFIVINFGTFSYFTSITL HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHH DIIESSKEKKYFFLACIMLLWAGGNLMVDLLNPFITPTNNTIVICALLYCINILTEFLHY HHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC NPTSHKLNLNSKFSSLIKNVELQLLTGFVVAYVTLDILWYYEAFALKKELALINLRLILK CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIFLAICFSIIPICYILSKVNKYLANLSLTIILLVCFILLPLHGTNKNLNILYIILIGSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHH LGSIYICNILILIDKFRDYELRTALFSYFSMCSIGTYAGALSSHVPYGTINGSDFLFSVC HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AVVGSFVAYHFWYFIKYTLYRF HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]