Click here to switch to the map view.

The map label for this gene is 15892000

Identifier: 15892000

GI number: 15892000

Start: 70152

End: 70571

Strand: Reverse

Name: 15892000

Synonym: RC0077

Alternate gene names: NA

Gene position: 70571-70152 (Counterclockwise)

Preceding gene: 15892003

Following gene: 15891995

Centisome position: 5.56

GC content: 30.71

Gene sequence:

>420_bases
ATGGTCTACTTATCAAGAATAAGGCTTAAGGTTTATATGATAAAAAAAATAATATTTGGAATAGCTATTTTACTTAGTAC
AAGCTGCTTTGCCAATAGTACAACTTCTGACGGCTCAAAAAAAGATGCAGCAAAAACTAACGATATTACAACACAAAAAA
TTATAGATGATTTTTCTGCTTACGCCGGCACTATAAAACCGGAAGTACGGGAGGAAATACAAAAATATAGAGTAGCAATA
GTCAAGATTAATAAGAAGAAACGTGAACTATATAACAGGCTTTCCAAAGAGGCTCAAAATTTTTTAGCAGAGCAACAAAA
ATATAAACAAAAACTATCTATCTCTAAGCTAACGGTAGAAAACGACCAAAAGAATAATACTGCTGATTCTAATGATAATA
AGAGCAAAGATACAAAATAA

Upstream 100 bases:

>100_bases
CGTATAAAAAAGTACGTAAGGATGCGAGTACCGGATTGACGTATAAATTACCCCTAGAAGTAGAGTTCCAAAAGAAGTCT
ATTGACTATTAGACTTAAAA

Downstream 100 bases:

>100_bases
ATTACTTTTCTTAGCCGTTATTGTGCGGGCCAAAAATCGTCATTGCGAGCAGCCGTAGGCTGTGGCGGCAATCTCATGAA
ATAATAACAAACTCCTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MVYLSRIRLKVYMIKKIIFGIAILLSTSCFANSTTSDGSKKDAAKTNDITTQKIIDDFSAYAGTIKPEVREEIQKYRVAI
VKINKKKRELYNRLSKEAQNFLAEQQKYKQKLSISKLTVENDQKNNTADSNDNKSKDTK

Sequences:

>Translated_139_residues
MVYLSRIRLKVYMIKKIIFGIAILLSTSCFANSTTSDGSKKDAAKTNDITTQKIIDDFSAYAGTIKPEVREEIQKYRVAI
VKINKKKRELYNRLSKEAQNFLAEQQKYKQKLSISKLTVENDQKNNTADSNDNKSKDTK
>Mature_139_residues
MVYLSRIRLKVYMIKKIIFGIAILLSTSCFANSTTSDGSKKDAAKTNDITTQKIIDDFSAYAGTIKPEVREEIQKYRVAI
VKINKKKRELYNRLSKEAQNFLAEQQKYKQKLSISKLTVENDQKNNTADSNDNKSKDTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15918; Mature: 15918

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYLSRIRLKVYMIKKIIFGIAILLSTSCFANSTTSDGSKKDAAKTNDITTQKIIDDFSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
YAGTIKPEVREEIQKYRVAIVKINKKKRELYNRLSKEAQNFLAEQQKYKQKLSISKLTVE
HHCCCCHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
NDQKNNTADSNDNKSKDTK
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVYLSRIRLKVYMIKKIIFGIAILLSTSCFANSTTSDGSKKDAAKTNDITTQKIIDDFSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
YAGTIKPEVREEIQKYRVAIVKINKKKRELYNRLSKEAQNFLAEQQKYKQKLSISKLTVE
HHCCCCHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
NDQKNNTADSNDNKSKDTK
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]