Click here to switch to the map view.

The map label for this gene is 15891973

Identifier: 15891973

GI number: 15891973

Start: 45699

End: 46100

Strand: Reverse

Name: 15891973

Synonym: RC0050

Alternate gene names: NA

Gene position: 46100-45699 (Counterclockwise)

Preceding gene: 15891974

Following gene: 15891972

Centisome position: 3.63

GC content: 30.6

Gene sequence:

>402_bases
ATGAGACAGATTTCAGTAATTTCTTTACGACTAAATTGCCAATGCACAATAAATTTTTTCGTTATGATACCAAATAATAT
CAAAGAAATGAATAGTAATCCTATGGAAAAATTAGCGTTTCAAGATGCTATTTCTTTGATTAGTTATATGTATCATCATG
CAGAGGATATATTAAAGAGTTCTAAATCGTTGTTAAATCAAATTTTAACTACTACAAAAGAAGGATTAAGCACATCATGG
GATGATATAAAGAAAACTACTTCCGGCAATGTAGAGTACGATTTATGGCAAATGGAAAAGCAAGTACCTGAATCTGAAAT
AATAACTGAGAAAGCAAAAAGTGGACAGCTGCGAAGTATAAAGATATCTTGCTTTTCGGTTGATTGCTCAAAACCACTTT
AA

Upstream 100 bases:

>100_bases
ATTAATAAACAATCTGATATAACCGTACCTGTAGGACAAGATCTACAGAGATTAGCTTTACTTTTTGCTAATTTAAGGAG
TGTAGAAATCAAAAAAAATA

Downstream 100 bases:

>100_bases
AAAAATAGCGATTTCTTCAACCGGTATCAGAAGAGGAGTTGAAGATTTTCTTAATCAAAAATATTTTGCTGATAAATTTA
CTGAAGAAGAACAAGGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRQISVISLRLNCQCTINFFVMIPNNIKEMNSNPMEKLAFQDAISLISYMYHHAEDILKSSKSLLNQILTTTKEGLSTSW
DDIKKTTSGNVEYDLWQMEKQVPESEIITEKAKSGQLRSIKISCFSVDCSKPL

Sequences:

>Translated_133_residues
MRQISVISLRLNCQCTINFFVMIPNNIKEMNSNPMEKLAFQDAISLISYMYHHAEDILKSSKSLLNQILTTTKEGLSTSW
DDIKKTTSGNVEYDLWQMEKQVPESEIITEKAKSGQLRSIKISCFSVDCSKPL
>Mature_133_residues
MRQISVISLRLNCQCTINFFVMIPNNIKEMNSNPMEKLAFQDAISLISYMYHHAEDILKSSKSLLNQILTTTKEGLSTSW
DDIKKTTSGNVEYDLWQMEKQVPESEIITEKAKSGQLRSIKISCFSVDCSKPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y050_RICCN (Q92JL7)

Other databases:

- EMBL:   AE006914
- PIR:   B97706
- RefSeq:   NP_359687.1
- GeneID:   928609
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0050
- NMPDR:   fig|272944.1.peg.50
- ProtClustDB:   CLSK2484364
- BioCyc:   RCON272944:RC0050-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15183; Mature: 15183

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQISVISLRLNCQCTINFFVMIPNNIKEMNSNPMEKLAFQDAISLISYMYHHAEDILKS
CCCEEEEEEEEEEEEEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKSLLNQILTTTKEGLSTSWDDIKKTTSGNVEYDLWQMEKQVPESEIITEKAKSGQLRSI
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEE
KISCFSVDCSKPL
EEEEEEECCCCCC
>Mature Secondary Structure
MRQISVISLRLNCQCTINFFVMIPNNIKEMNSNPMEKLAFQDAISLISYMYHHAEDILKS
CCCEEEEEEEEEEEEEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKSLLNQILTTTKEGLSTSWDDIKKTTSGNVEYDLWQMEKQVPESEIITEKAKSGQLRSI
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEE
KISCFSVDCSKPL
EEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893