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The map label for this gene is 15891972

Identifier: 15891972

GI number: 15891972

Start: 45197

End: 45721

Strand: Reverse

Name: 15891972

Synonym: RC0049

Alternate gene names: NA

Gene position: 45721-45197 (Counterclockwise)

Preceding gene: 15891973

Following gene: 15891971

Centisome position: 3.6

GC content: 29.52

Gene sequence:

>525_bases
TTGATTGCTCAAAACCACTTTAAAAAAATAGCGATTTCTTCAACCGGTATCAGAAGAGGAGTTGAAGATTTTCTTAATCA
AAAATATTTTGCTGATAAATTTACTGAAGAAGAACAAGGTTGTTTTGTCTTATTCTTAGCATATAAAATATTTAGATATG
GTAATAAGGTATGTCTCAAATATTTTAGCGAGCAACAGCCGGAGCTAATTACAAAAATTTTCGATGATTATCCTCATTTA
TTTTTTAGGAGAGAGGCAATTAACATATGTATTAAAAATAAAGATGGTAGACAAAAAGCATTAGATGCAATAAAGTTAAA
ATCGTCAAATAAATTTTTTAAAGATTGCTTTGATACAGTATTCCCTAAGGTAGATGTTGTTGTAAACCTCATATTTGAAG
AAGAACCTAAACCGAAGCACGTACCTAATGAACCTGAGCTTGTATTTAACTTAGAGCTCATACCTTTAAATATAGACGAA
AATGATGATGTACTACCAACAAGTAATGTAGAAAATAACCACTAA

Upstream 100 bases:

>100_bases
GATTTATGGCAAATGGAAAAGCAAGTACCTGAATCTGAAATAATAACTGAGAAAGCAAAAAGTGGACAGCTGCGAAGTAT
AAAGATATCTTGCTTTTCGG

Downstream 100 bases:

>100_bases
ATTTTTAAAATGACTAGCATATATCACATTCTTGACCGTGTTCCTGCTATTTATAAGCAAGACATGGAAATAGAGTATGA
GCATTTGGCTATGCAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MIAQNHFKKIAISSTGIRRGVEDFLNQKYFADKFTEEEQGCFVLFLAYKIFRYGNKVCLKYFSEQQPELITKIFDDYPHL
FFRREAINICIKNKDGRQKALDAIKLKSSNKFFKDCFDTVFPKVDVVVNLIFEEEPKPKHVPNEPELVFNLELIPLNIDE
NDDVLPTSNVENNH

Sequences:

>Translated_174_residues
MIAQNHFKKIAISSTGIRRGVEDFLNQKYFADKFTEEEQGCFVLFLAYKIFRYGNKVCLKYFSEQQPELITKIFDDYPHL
FFRREAINICIKNKDGRQKALDAIKLKSSNKFFKDCFDTVFPKVDVVVNLIFEEEPKPKHVPNEPELVFNLELIPLNIDE
NDDVLPTSNVENNH
>Mature_174_residues
MIAQNHFKKIAISSTGIRRGVEDFLNQKYFADKFTEEEQGCFVLFLAYKIFRYGNKVCLKYFSEQQPELITKIFDDYPHL
FFRREAINICIKNKDGRQKALDAIKLKSSNKFFKDCFDTVFPKVDVVVNLIFEEEPKPKHVPNEPELVFNLELIPLNIDE
NDDVLPTSNVENNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y049_RICCN (Q92JL8)

Other databases:

- EMBL:   AE006914
- PIR:   A97706
- RefSeq:   NP_359686.1
- GeneID:   928615
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0049
- NMPDR:   fig|272944.1.peg.49
- OMA:   VPNEPEL
- ProtClustDB:   CLSK881886
- BioCyc:   RCON272944:RC0049-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20400; Mature: 20400

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAQNHFKKIAISSTGIRRGVEDFLNQKYFADKFTEEEQGCFVLFLAYKIFRYGNKVCLK
CCCCHHHHEEEECCHHHHHHHHHHHCCHHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHHH
YFSEQQPELITKIFDDYPHLFFRREAINICIKNKDGRQKALDAIKLKSSNKFFKDCFDTV
HHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHH
FPKVDVVVNLIFEEEPKPKHVPNEPELVFNLELIPLNIDENDDVLPTSNVENNH
CCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIAQNHFKKIAISSTGIRRGVEDFLNQKYFADKFTEEEQGCFVLFLAYKIFRYGNKVCLK
CCCCHHHHEEEECCHHHHHHHHHHHCCHHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHHH
YFSEQQPELITKIFDDYPHLFFRREAINICIKNKDGRQKALDAIKLKSSNKFFKDCFDTV
HHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHH
FPKVDVVVNLIFEEEPKPKHVPNEPELVFNLELIPLNIDENDDVLPTSNVENNH
CCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893