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The map label for this gene is 15891952

Identifier: 15891952

GI number: 15891952

Start: 28705

End: 29538

Strand: Reverse

Name: 15891952

Synonym: RC0029

Alternate gene names: NA

Gene position: 29538-28705 (Counterclockwise)

Preceding gene: 15891954

Following gene: 15891951

Centisome position: 2.33

GC content: 30.94

Gene sequence:

>834_bases
ATGCGAAGTATTTTTATTATACTAATATTTTTATTATTTTTGAGTAGCTGTTCAGAAGAAAAAGCACAAGATAAGAACCA
TGAGGAAAAACAAATAATAGAGCACGAAACTCAAAATAACGAAACTTCTAAAGCAACGAATCAGGAAGCCGTAAATTCTG
AAAATACGACTGAATCAATAGTTCCTGCTAATGATAATAATCAGACTGATGAAGTATCAACGCCGGCTTCACAAAAACAA
AAAAATCCTGCAATAAAAGCTGTTAAAGTTACTTTTAAAGTTGATGATAATGATATGGTTCTTGGTAACAAAAAATCAAA
TGTTATAGTAGTCGAGTATTTTTCTCCTACCTGTCCGCATTGTGCTTATTATCATCAAACAATTTTTCCGGAACTTAAGA
AAAAATATATTGATACTAACAAAATTGCATATGTGGTTCGTGAATTTATTGCTACTAAACAAGATTTAGATGCTGCAATT
TTAGCCCGCTGCAAGGGGGATACAAATAGTTTTACACAACTTCATAATATCATATTAATACAACAAGATAAGTGGGCATA
TAGCAATAAATACAGAGAATTATTAACTGATATAGGACAACTTGGCGGTATTTCTCCAGAAGAATATAAACAATGTTTAA
ATAATGATAAAATTACTGCAATACTAATTGCTAATACCAATTTTGTAGCAAAAGCACCCCAATTTATAGGTACTCCTTCT
TTCTTCGTTAACGGAGTACAAACAGGAAATTATAGCATAGATACTATTTCCACAGCAGTTGATAAAGCTTTAGAGGAGCA
GAAAGAAAAAGCAAAAAATGAAATGAGCTTGTAA

Upstream 100 bases:

>100_bases
CATAGCACATTTTGCTTTTATTATAAAGTAGAGATTTTTATTGAAATAAAATTGATACGATCTTATTGTAGATAATATTA
AATAAGTTAAAGGAATAAAT

Downstream 100 bases:

>100_bases
TTTAGATCGTCATTGCGAGCAGTCGTAGACTGTGCGGCAATCTCGTTAAATATCCTGAGATTGCTTCGTCGACGGCTATG
GCGTCTTCTCGCAATGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRSIFIILIFLLFLSSCSEEKAQDKNHEEKQIIEHETQNNETSKATNQEAVNSENTTESIVPANDNNQTDEVSTPASQKQ
KNPAIKAVKVTFKVDDNDMVLGNKKSNVIVVEYFSPTCPHCAYYHQTIFPELKKKYIDTNKIAYVVREFIATKQDLDAAI
LARCKGDTNSFTQLHNIILIQQDKWAYSNKYRELLTDIGQLGGISPEEYKQCLNNDKITAILIANTNFVAKAPQFIGTPS
FFVNGVQTGNYSIDTISTAVDKALEEQKEKAKNEMSL

Sequences:

>Translated_277_residues
MRSIFIILIFLLFLSSCSEEKAQDKNHEEKQIIEHETQNNETSKATNQEAVNSENTTESIVPANDNNQTDEVSTPASQKQ
KNPAIKAVKVTFKVDDNDMVLGNKKSNVIVVEYFSPTCPHCAYYHQTIFPELKKKYIDTNKIAYVVREFIATKQDLDAAI
LARCKGDTNSFTQLHNIILIQQDKWAYSNKYRELLTDIGQLGGISPEEYKQCLNNDKITAILIANTNFVAKAPQFIGTPS
FFVNGVQTGNYSIDTISTAVDKALEEQKEKAKNEMSL
>Mature_277_residues
MRSIFIILIFLLFLSSCSEEKAQDKNHEEKQIIEHETQNNETSKATNQEAVNSENTTESIVPANDNNQTDEVSTPASQKQ
KNPAIKAVKVTFKVDDNDMVLGNKKSNVIVVEYFSPTCPHCAYYHQTIFPELKKKYIDTNKIAYVVREFIATKQDLDAAI
LARCKGDTNSFTQLHNIILIQQDKWAYSNKYRELLTDIGQLGGISPEEYKQCLNNDKITAILIANTNFVAKAPQFIGTPS
FFVNGVQTGNYSIDTISTAVDKALEEQKEKAKNEMSL

Specific function: May be required for disulfide bond formation in some proteins

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Periplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DSB_RICCN (Q92JN8)

Other databases:

- EMBL:   AE006914
- PIR:   E97703
- RefSeq:   NP_359666.1
- ProteinModelPortal:   Q92JN8
- GeneID:   928636
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0029
- NMPDR:   fig|272944.1.peg.29
- OMA:   AYYHQTI
- ProtClustDB:   CLSK870708
- BioCyc:   RCON272944:RC0029-MONOMER
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335
- Gene3D:   G3DSA:3.40.30.10

Pfam domain/function: SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 31198; Mature: 31198

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00194 THIOREDOXIN_1; PS51352 THIOREDOXIN_2; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIFIILIFLLFLSSCSEEKAQDKNHEEKQIIEHETQNNETSKATNQEAVNSENTTESI
CHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHCCHHHCCCCCCCCCE
VPANDNNQTDEVSTPASQKQKNPAIKAVKVTFKVDDNDMVLGNKKSNVIVVEYFSPTCPH
ECCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCCEEECCCCCCEEEEEECCCCCCC
CAYYHQTIFPELKKKYIDTNKIAYVVREFIATKQDLDAAILARCKGDTNSFTQLHNIILI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHEEEEE
QQDKWAYSNKYRELLTDIGQLGGISPEEYKQCLNNDKITAILIANTNFVAKAPQFIGTPS
ECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCHHCCCHHHCCHH
FFVNGVQTGNYSIDTISTAVDKALEEQKEKAKNEMSL
HHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSIFIILIFLLFLSSCSEEKAQDKNHEEKQIIEHETQNNETSKATNQEAVNSENTTESI
CHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHCCHHHCCCCCCCCCE
VPANDNNQTDEVSTPASQKQKNPAIKAVKVTFKVDDNDMVLGNKKSNVIVVEYFSPTCPH
ECCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCCEEECCCCCCEEEEEECCCCCCC
CAYYHQTIFPELKKKYIDTNKIAYVVREFIATKQDLDAAILARCKGDTNSFTQLHNIILI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHEEEEE
QQDKWAYSNKYRELLTDIGQLGGISPEEYKQCLNNDKITAILIANTNFVAKAPQFIGTPS
ECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCHHCCCHHHCCHH
FFVNGVQTGNYSIDTISTAVDKALEEQKEKAKNEMSL
HHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893