| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15891951
Identifier: 15891951
GI number: 15891951
Start: 28331
End: 28627
Strand: Reverse
Name: 15891951
Synonym: RC0028
Alternate gene names: NA
Gene position: 28627-28331 (Counterclockwise)
Preceding gene: 15891952
Following gene: 15891950
Centisome position: 2.26
GC content: 29.63
Gene sequence:
>297_bases ATGGCGTCTTCTCGCAATGACGGAGATAAACTAATGAATACGGAAAAACTAAAAGATATCAAAGCAAGAATTAAAGACTT AACAACTCCTAAGTTTTCTAATCCTAAAATTCGGCAAGAAATTAGCCCCTTCACTATCGCTGTAGATTTAGTTTCAGGTA CAATGTTAGGTGTCGTAATTGGAATATTTACGGATAAAATTTTTAATTCTAAACCTTTATTCCTTATTATATTTACAATA ATAGGAATGATTGCCGGCTTTAACATTATAAGGAAAAAAGTAAATAATAAAAAGTAA
Upstream 100 bases:
>100_bases CAAAAAATGAAATGAGCTTGTAATTTAGATCGTCATTGCGAGCAGTCGTAGACTGTGCGGCAATCTCGTTAAATATCCTG AGATTGCTTCGTCGACGGCT
Downstream 100 bases:
>100_bases GGAAATGACTCATAGCCCTTTAGCACAATTTGATATCAAAAAATTAATAGACATCAAAATGTTCGGTTTTGACGTCAGCT TTACTAATTCGAGTATCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MASSRNDGDKLMNTEKLKDIKARIKDLTTPKFSNPKIRQEISPFTIAVDLVSGTMLGVVIGIFTDKIFNSKPLFLIIFTI IGMIAGFNIIRKKVNNKK
Sequences:
>Translated_98_residues MASSRNDGDKLMNTEKLKDIKARIKDLTTPKFSNPKIRQEISPFTIAVDLVSGTMLGVVIGIFTDKIFNSKPLFLIIFTI IGMIAGFNIIRKKVNNKK >Mature_97_residues ASSRNDGDKLMNTEKLKDIKARIKDLTTPKFSNPKIRQEISPFTIAVDLVSGTMLGVVIGIFTDKIFNSKPLFLIIFTII GMIAGFNIIRKKVNNKK
Specific function: Unknown
COG id: COG5336
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10970; Mature: 10839
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSRNDGDKLMNTEKLKDIKARIKDLTTPKFSNPKIRQEISPFTIAVDLVSGTMLGVVI CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH GIFTDKIFNSKPLFLIIFTIIGMIAGFNIIRKKVNNKK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASSRNDGDKLMNTEKLKDIKARIKDLTTPKFSNPKIRQEISPFTIAVDLVSGTMLGVVI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH GIFTDKIFNSKPLFLIIFTIIGMIAGFNIIRKKVNNKK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]