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The map label for this gene is petR [H]

Identifier: 158425598

GI number: 158425598

Start: 4542390

End: 4543109

Strand: Direct

Name: petR [H]

Synonym: AZC_3974

Alternate gene names: 158425598

Gene position: 4542390-4543109 (Clockwise)

Preceding gene: 158425597

Following gene: 158425599

Centisome position: 84.59

GC content: 71.11

Gene sequence:

>720_bases
ATGACCGAAACCGCTGCCCGCCCCGCTCCGCCGCCGCTGCCGGACGACGCGCCCCATCTGCTGGTGGTGGATGACGACAA
CCGCATCCGCACCCTGCTCTCGCGCTTCCTGAGCGAGAACGGCTATCGCGTCACCACGGCCGCCTCCGCCGCCGAGGCGC
GCGGGCGCATGGAAGGGCTGGAGTTCGACCTCATCGTGCTGGACGTGATGATGCCGGGCGAGACGGGGATCGACTTCGCC
CGCTCCCTGCGCGCCACCTCGTCCATCCCGATCCTGATGCTCACCGCCCGCTCGGAGACCATGGACCGCATCACCGGCCT
CGAGGCCGGGGTGGACGACTATGTGGCCAAGCCCTTCGAGCCGCGCGAGCTGCTGCTGCGCATCGGCTCCATCCTCAAGC
GCACCGCCCCTGCGCCGCAGAAGGCCATCGAGAGCGTGCGCTTCGGTGACTTCACCTTCCATATCGGGCGCGGCGAGCTG
ACCCGGCTCGGCGAGCCAGTGCGCATCACCGAGCGCGAGCGCGACATGCTGCGGGCGCTGGCCGAGCAGCCGGGCGAGAC
GGTGCCCCGCCTTGCCCTCGCCGCCGGCGGTGCCGCCAGCGAGCGGGCCGTGGATGTGCAGGTGAACCGCCTGCGCCGCA
AAGTGGAACGCGATCCCGCCAATCCCTCCTTCGTGCAGACCGTGCGCGGCCTCGGCTACAGGCTGGTGGTGACGCCGTGA

Upstream 100 bases:

>100_bases
CTTGTCGCCATGATCGACACCGAGGATCGGGCAGCGGTGGAGCGGCTGATCGAGCGGGCACAATTGCCCGCCGCCACGCC
CTCCGCCTGAGGATCCACGG

Downstream 100 bases:

>100_bases
CCGTGATGGATGCGAGCCGCGCCGGGCTGCGCGGTCTCTGGGACTTCATGCGCGAGGCGAACGCGCGCATCGGCGCCTGG
TTCAACCGCGTCACGCCCAA

Product: response regulator receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTETAARPAPPPLPDDAPHLLVVDDDNRIRTLLSRFLSENGYRVTTAASAAEARGRMEGLEFDLIVLDVMMPGETGIDFA
RSLRATSSIPILMLTARSETMDRITGLEAGVDDYVAKPFEPRELLLRIGSILKRTAPAPQKAIESVRFGDFTFHIGRGEL
TRLGEPVRITERERDMLRALAEQPGETVPRLALAAGGAASERAVDVQVNRLRRKVERDPANPSFVQTVRGLGYRLVVTP

Sequences:

>Translated_239_residues
MTETAARPAPPPLPDDAPHLLVVDDDNRIRTLLSRFLSENGYRVTTAASAAEARGRMEGLEFDLIVLDVMMPGETGIDFA
RSLRATSSIPILMLTARSETMDRITGLEAGVDDYVAKPFEPRELLLRIGSILKRTAPAPQKAIESVRFGDFTFHIGRGEL
TRLGEPVRITERERDMLRALAEQPGETVPRLALAAGGAASERAVDVQVNRLRRKVERDPANPSFVQTVRGLGYRLVVTP
>Mature_238_residues
TETAARPAPPPLPDDAPHLLVVDDDNRIRTLLSRFLSENGYRVTTAASAAEARGRMEGLEFDLIVLDVMMPGETGIDFAR
SLRATSSIPILMLTARSETMDRITGLEAGVDDYVAKPFEPRELLLRIGSILKRTAPAPQKAIESVRFGDFTFHIGRGELT
RLGEPVRITERERDMLRALAEQPGETVPRLALAAGGAASERAVDVQVNRLRRKVERDPANPSFVQTVRGLGYRLVVTP

Specific function: Necessary for photosynthetic and respiratory growth. Probable promoter-specific protein mediating the interaction between DNA and RNA polymerase [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=46.2555066079295, Blast_Score=190, Evalue=8e-50,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=36.5638766519824, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1788394, Length=232, Percent_Identity=33.6206896551724, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=31.6017316017316, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=36, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=36.5638766519824, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=34.6491228070175, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=30.4932735426009, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1786911, Length=230, Percent_Identity=35.6521739130435, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=31.4159292035398, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=31.8385650224215, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=30.4545454545455, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=29.7297297297297, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=29.1845493562232, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1790437, Length=140, Percent_Identity=31.4285714285714, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1788191, Length=126, Percent_Identity=27.7777777777778, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26283; Mature: 26151

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETAARPAPPPLPDDAPHLLVVDDDNRIRTLLSRFLSENGYRVTTAASAAEARGRMEGL
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCC
EFDLIVLDVMMPGETGIDFARSLRATSSIPILMLTARSETMDRITGLEAGVDDYVAKPFE
EEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCHHHHHCCCCC
PRELLLRIGSILKRTAPAPQKAIESVRFGDFTFHIGRGELTRLGEPVRITERERDMLRAL
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCHHHHCCCCCEECHHHHHHHHHH
AEQPGETVPRLALAAGGAASERAVDVQVNRLRRKVERDPANPSFVQTVRGLGYRLVVTP
HHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECC
>Mature Secondary Structure 
TETAARPAPPPLPDDAPHLLVVDDDNRIRTLLSRFLSENGYRVTTAASAAEARGRMEGL
CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCC
EFDLIVLDVMMPGETGIDFARSLRATSSIPILMLTARSETMDRITGLEAGVDDYVAKPFE
EEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCHHHHHCCCCC
PRELLLRIGSILKRTAPAPQKAIESVRFGDFTFHIGRGELTRLGEPVRITERERDMLRAL
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCHHHHCCCCCEECHHHHHHHHHH
AEQPGETVPRLALAAGGAASERAVDVQVNRLRRKVERDPANPSFVQTVRGLGYRLVVTP
HHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]