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The map label for this gene is omp31 [H]

Identifier: 158425586

GI number: 158425586

Start: 4528229

End: 4528927

Strand: Reverse

Name: omp31 [H]

Synonym: AZC_3962

Alternate gene names: 158425586

Gene position: 4528927-4528229 (Counterclockwise)

Preceding gene: 158425587

Following gene: 158425585

Centisome position: 84.34

GC content: 65.24

Gene sequence:

>699_bases
ATGTTGAAGCGCGCTCTCGCCGGGGTGTCGGCCCTGGCTCTCCTCGGCTGCGGCGCCGCCTCTGCGGCTGACCTCGCCAC
CAAGTACCCCGTCAAGGCCATTGCGCCGGTCGTGCCCGTGTTCTCCTGGACCGGCTTCTACATCGGCGCCAACGTCGGTT
ACGCCTGGGGCTCCACGGACTTCCACGGCAACACCCGCACGGGCCTGCCCTACAGCTACTCCGTCGGCGGTCAGGACGAC
TGGCTGGGCGGTGGCCAGATCGGCTACAACTACCAGTTCGCCAACAACGTCGTGGTCGGCATCGAAGCTGACATCGACTG
GACCGGCATCGGCAGCTCCGGCGTCGCCGTGAACGGCCCGCTCGCCGGCCAGACGATCAACGGCTCGCTCGACTACTTCG
GCACCGTCCGCGCCCGTCTCGGCTACGCCTTCGACAAGTTCCTGCCCTACATCACCGGTGGTGCGGCTTGGGGCCATGTC
GACTACGGCAACATCTACGGTGTCGGCACCTCCTCCACGAACTGGGGCTGGACCATCGGCGCGGGCTTCGAGTACGCCGT
CACCAACAACATCACGGCTGGCCTCGAGTACCTGTACGTGGATCTGGGTGGCAACAACTACCTGTTCCCGAACCTGACCT
CGCTGGACACCTCGTTCAACATGAGCGTCCTGCGCGCTCGCGTGAACTACAAGTTCTGA

Upstream 100 bases:

>100_bases
TTCAAAAGGAGGTGTTGCGCTAGGGTGACAGACGGGGCGGCGAACCCGATGTATGGTCCGCCTCACTGGTTCTTCGTCGA
AAAACACAAAAGGTGTTCCC

Downstream 100 bases:

>100_bases
TCCGGACCTTTCCGGTGACGAGAACCCCGGGCGAAAGCCCGGGGTTTTTTATTGCCCCGACTCTGCCGCATTTGGTCCTC
GCTTTCCCCGGGGCGCGCCG

Product: outer membrane protein, 31 kDa precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MLKRALAGVSALALLGCGAASAADLATKYPVKAIAPVVPVFSWTGFYIGANVGYAWGSTDFHGNTRTGLPYSYSVGGQDD
WLGGGQIGYNYQFANNVVVGIEADIDWTGIGSSGVAVNGPLAGQTINGSLDYFGTVRARLGYAFDKFLPYITGGAAWGHV
DYGNIYGVGTSSTNWGWTIGAGFEYAVTNNITAGLEYLYVDLGGNNYLFPNLTSLDTSFNMSVLRARVNYKF

Sequences:

>Translated_232_residues
MLKRALAGVSALALLGCGAASAADLATKYPVKAIAPVVPVFSWTGFYIGANVGYAWGSTDFHGNTRTGLPYSYSVGGQDD
WLGGGQIGYNYQFANNVVVGIEADIDWTGIGSSGVAVNGPLAGQTINGSLDYFGTVRARLGYAFDKFLPYITGGAAWGHV
DYGNIYGVGTSSTNWGWTIGAGFEYAVTNNITAGLEYLYVDLGGNNYLFPNLTSLDTSFNMSVLRARVNYKF
>Mature_232_residues
MLKRALAGVSALALLGCGAASAADLATKYPVKAIAPVVPVFSWTGFYIGANVGYAWGSTDFHGNTRTGLPYSYSVGGQDD
WLGGGQIGYNYQFANNVVVGIEADIDWTGIGSSGVAVNGPLAGQTINGSLDYFGTVRARLGYAFDKFLPYITGGAAWGHV
DYGNIYGVGTSSTNWGWTIGAGFEYAVTNNITAGLEYLYVDLGGNNYLFPNLTSLDTSFNMSVLRARVNYKF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 24550; Mature: 24550

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRALAGVSALALLGCGAASAADLATKYPVKAIAPVVPVFSWTGFYIGANVGYAWGSTD
CCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCEEECCCCC
FHGNTRTGLPYSYSVGGQDDWLGGGQIGYNYQFANNVVVGIEADIDWTGIGSSGVAVNGP
CCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCEEECCCCCCCEECCC
LAGQTINGSLDYFGTVRARLGYAFDKFLPYITGGAAWGHVDYGNIYGVGTSSTNWGWTIG
CCCCEECCCCCHHHHHHHHHHHHHHHHHHHEECCCEECCCCCCCEEEECCCCCCCCEEEE
AGFEYAVTNNITAGLEYLYVDLGGNNYLFPNLTSLDTSFNMSVLRARVNYKF
CCEEEEEECCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MLKRALAGVSALALLGCGAASAADLATKYPVKAIAPVVPVFSWTGFYIGANVGYAWGSTD
CCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCEEECCCCC
FHGNTRTGLPYSYSVGGQDDWLGGGQIGYNYQFANNVVVGIEADIDWTGIGSSGVAVNGP
CCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCEEECCCCCCCEECCC
LAGQTINGSLDYFGTVRARLGYAFDKFLPYITGGAAWGHVDYGNIYGVGTSSTNWGWTIG
CCCCEECCCCCHHHHHHHHHHHHHHHHHHHEECCCEECCCCCCCEEEECCCCCCCCEEEE
AGFEYAVTNNITAGLEYLYVDLGGNNYLFPNLTSLDTSFNMSVLRARVNYKF
CCEEEEEECCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]