| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is livH [C]
Identifier: 158425512
GI number: 158425512
Start: 4439560
End: 4440432
Strand: Reverse
Name: livH [C]
Synonym: AZC_3888
Alternate gene names: 158425512
Gene position: 4440432-4439560 (Counterclockwise)
Preceding gene: 158425513
Following gene: 158425511
Centisome position: 82.69
GC content: 67.35
Gene sequence:
>873_bases ATGGATCTTGCAACCCTCCTTTTCTCGGCGCTCTACCAGTTCGGCGATGCCTTCGCCTTCCTGGTGCTGTCCGCCTGCGG GCTGGCCGTCATCTTCGGCATGATGGGCGTCATCAATCTCGCCCATGGCGAGTTCATCATGTGCGGAGCCTATGTCTCGG TCAGCGCGGCCCGCGCCGGCCTGCCTCTGCCGCTGGCCGTGCTCGCCGGAGCGCTGGCCTCGGGCCTTGCGGGCATGGTG ATCGAGCGGCTCGTCATCCGTCACCTTTATGAGCGTCCGCTCGATACCATTGTCGCCACCTGGGGCATCAGCCTCATCGC CACGCAGGGCACGCTCATTCTGCTGGGCTCGTCCCTTCAGGGCATCGGCACGCCGCTCGGCGGTTTCCAGGTGGGCGCCT ATTCCTATTCGCTCTATCGCGTGGTGTTGTTCCTCTCCGCCCTCGCGGTGCTGGCGGCGCTCTATGCGCTGTTCAACTGG ACGAAGTTCGGCGTCATCGCCCGTGCCACCATTCAGGTGCCGCACATGGCGGCCGCGCTGGGGGTGGACACGCGGCTCAT CTACAGCCTCACCTTCGGCCTCGGCGCGGCGCTGGCGGGGCTTGCCGGCGGGCTCTATGCCCCGACCATGACACTGGTGC CCACCATGGGCGCCACCTTCATCATGGAAGCCTTCGTCACCGTGGTCGTGGGCGGGGCGGACGTCTTCCTCGGCACCGCG CCGGCCGCCGCCATCCTCGCCATCGTGAAGGCCAGCATGACCTCCTGGCAGGGGCAGCTCTTCGGGCAGATCGGGCTCCT GGTCACGGTCATCGTCGTCATCCGCATCCTGCCGCGGGGGCTGTCCGGCTTCCTGCTGCGCGAGCGGGCGTGA
Upstream 100 bases:
>100_bases ATCGGCTCTCTCCCCGACCGATCGGTTCGCTTGCCGCCGCCCCGCCTCCTGCGGGGCGGTCCTCCGCCCCTTTTCCTCCC GCTGCCGGTGCTGCCCGACA
Downstream 100 bases:
>100_bases GGAGGGCGCGATGGCATTCGGCATTCTCACCCGGCTCGAAGGCCCGCAGACGCTGGGGCGCGGCCCCGCCTTCTGGGGCG GCTTCCTCCTCGTGCTCGCC
Product: ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: Branched-Chain Amino Acid ABC Transporter Permease Protein; Urea ABC Transporter Permease Protein UrtB; ABC Transporter Permease Protein; Amino Acid Or Sugar ABC Transport System Permease Protein; Branched Chain Amino Acid ABC Transporter Permease; Branched-Chain Amino Acid Transport System Permease Protein; ABC Transporter Permease; Urea Or Short-Chain Amide ABC Transporter Permease Protein; ABC-Type Urea Transport System Permease Protein I; Urea ABC Transporter Permease UrtB; Urea ABC Transporter Permease; ABC-Type Transport System Permease Protein; ABC Transporter Membrane Spanning Protein; Urea/Short-Chain Amide Transport System Permease Protein; Urea/Short-Chain Amide ABC Transporter Permease Protein; Urea Or Short-Chain Amide ABC Transporter; Transmembrane Component Of ABC Transporter; Branched-Chain Amino Acid ABC Transporter Permease; Urea ABC Transporter; Urea ABC Transporter Permease Protein; ABC Transporter; Branched-Chain/Neutral Amino Acids ABC Transporter Permease; Permease Component Of ABC Transporter Protein; Permease Component Of ABC Transporter
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MDLATLLFSALYQFGDAFAFLVLSACGLAVIFGMMGVINLAHGEFIMCGAYVSVSAARAGLPLPLAVLAGALASGLAGMV IERLVIRHLYERPLDTIVATWGISLIATQGTLILLGSSLQGIGTPLGGFQVGAYSYSLYRVVLFLSALAVLAALYALFNW TKFGVIARATIQVPHMAAALGVDTRLIYSLTFGLGAALAGLAGGLYAPTMTLVPTMGATFIMEAFVTVVVGGADVFLGTA PAAAILAIVKASMTSWQGQLFGQIGLLVTVIVVIRILPRGLSGFLLRERA
Sequences:
>Translated_290_residues MDLATLLFSALYQFGDAFAFLVLSACGLAVIFGMMGVINLAHGEFIMCGAYVSVSAARAGLPLPLAVLAGALASGLAGMV IERLVIRHLYERPLDTIVATWGISLIATQGTLILLGSSLQGIGTPLGGFQVGAYSYSLYRVVLFLSALAVLAALYALFNW TKFGVIARATIQVPHMAAALGVDTRLIYSLTFGLGAALAGLAGGLYAPTMTLVPTMGATFIMEAFVTVVVGGADVFLGTA PAAAILAIVKASMTSWQGQLFGQIGLLVTVIVVIRILPRGLSGFLLRERA >Mature_290_residues MDLATLLFSALYQFGDAFAFLVLSACGLAVIFGMMGVINLAHGEFIMCGAYVSVSAARAGLPLPLAVLAGALASGLAGMV IERLVIRHLYERPLDTIVATWGISLIATQGTLILLGSSLQGIGTPLGGFQVGAYSYSLYRVVLFLSALAVLAALYALFNW TKFGVIARATIQVPHMAAALGVDTRLIYSLTFGLGAALAGLAGGLYAPTMTLVPTMGATFIMEAFVTVVVGGADVFLGTA PAAAILAIVKASMTSWQGQLFGQIGLLVTVIVVIRILPRGLSGFLLRERA
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30104; Mature: 30104
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLATLLFSALYQFGDAFAFLVLSACGLAVIFGMMGVINLAHGEFIMCGAYVSVSAARAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCC LPLPLAVLAGALASGLAGMVIERLVIRHLYERPLDTIVATWGISLIATQGTLILLGSSLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCEEEEECCCCC GIGTPLGGFQVGAYSYSLYRVVLFLSALAVLAALYALFNWTKFGVIARATIQVPHMAAAL CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHH GVDTRLIYSLTFGLGAALAGLAGGLYAPTMTLVPTMGATFIMEAFVTVVVGGADVFLGTA CCHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC PAAAILAIVKASMTSWQGQLFGQIGLLVTVIVVIRILPRGLSGFLLRERA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure MDLATLLFSALYQFGDAFAFLVLSACGLAVIFGMMGVINLAHGEFIMCGAYVSVSAARAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCC LPLPLAVLAGALASGLAGMVIERLVIRHLYERPLDTIVATWGISLIATQGTLILLGSSLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCEEEEECCCCC GIGTPLGGFQVGAYSYSLYRVVLFLSALAVLAALYALFNWTKFGVIARATIQVPHMAAAL CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHH GVDTRLIYSLTFGLGAALAGLAGGLYAPTMTLVPTMGATFIMEAFVTVVVGGADVFLGTA CCHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC PAAAILAIVKASMTSWQGQLFGQIGLLVTVIVVIRILPRGLSGFLLRERA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA