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The map label for this gene is intZ [C]

Identifier: 158425506

GI number: 158425506

Start: 4432339

End: 4433676

Strand: Reverse

Name: intZ [C]

Synonym: AZC_3882

Alternate gene names: 158425506

Gene position: 4433676-4432339 (Counterclockwise)

Preceding gene: 158425507

Following gene: 158425504

Centisome position: 82.57

GC content: 65.77

Gene sequence:

>1338_bases
ATGGAAAAGCTCACAAAGCGCCGTTTGGACGCTCTGAAACCTTCCAAGGTTGGGGTCGAAGGTTCTGAGCAGTTCCTCTG
GGATGGCGAGTTGCGCGGCTTCGGCGTGCGGGTCAGCGCGGCGGGCCTCAAGAGTTTCATCGTGCAGTACCGAACGCCGG
AAGGACGCCATCGCCGCAGGGTCATCGGGCGGTATGGTCTCATGACCGTGGAGCAGGCGCGGGACGCGGCAAGAGACATC
CTGATGGCGGTCGCAAAGGGATGCGATCCGGAGGAGGCCGCCACGCGAACGGACGATCTAACCATCGGTGCGGTCTGCGA
TTGGTATCTGGACGAGGCGGAGGCCGGACGAATTCTTGGCAAGCGACGCCGGCCTATCAAGGCGTCCACGCTTGCCATGG
ATCGCAGCCGAATTGATGCGCATATCAAGCCGCTGCTGGGCAAACGGATCATAAACACGCTTAAGCTAGGAGACATCGAA
GGTGCCCAGGCCGATATCGCGGCCGGTAAGACTTCGAAAGCGCGCGTCGGTAGCCGCGGCGGTGCCACCACAGGCGGCGA
AGGGGTCGCTGCACGCACCATGTCGACCCTGCACTCCATCTTGGAGCACGCGGTGCGGCTGGGGAAAATCACGAGCAACC
CGGCAAAGGGTGTCCGTCGCCTCGCCAGTACGCCACGCGACCGCCGGCTGAGCCGCGCCGAGATCGAGAAGCTCGGCAAG
GCGATGCGGATAGCGGAGCAGGACGGCGAGCACCCGACCGGCCTCGCGGCAATCCGCTTCTTTCTGATGACGGGGCTGCG
CCGTATGGAGGGGCTCGCTTTGGAGCGTGCCTGGCTCCATGACGAGGAGGGCTCGATCCGATTTCCCGACACGAAGAGCG
GCGCGCAGACGCGGGTCATCGGCCGCGCCGCCGTTGACTTGCTGCTGGCTCAGCCACAAGCCGGATCGCGCTTCTTCTTC
CCGGCCGATTGGGGTGAAGGGCATTTCGTCGGGATCGTCCGCGTGCTCGATCGCCTCTGCGCAATGGCGCGACTGGAGGA
CGTCACCCCGCATACCCTGCGCCACACCTTCGCGAGCGTCGCCGGCGACCTCGGCTTTTCCGAACTGACGATCGCGGCGC
TGCTCGGCCACGCGGCGCGCGGCGTGACGCAGCGCTATATCCATATCGACGAGGCGCTGCGGCTCGCGGCCGACCGCGTC
GCGGACGAGATGGCCGACATCCTCGACGGCAAGGCGGCGGCCGCGCGTCCTTCTCGACGTGGGGCGCTCCAGACGCAGAA
TAACCGGGGGCAGACTAGGGAGCGCGGCGGCCAGAATATTGACGCGGAGCGGTTGTGA

Upstream 100 bases:

>100_bases
CCCAGACGCCACGATTTGATTTCGGATGCTTCCATTCGGCTTCCGGAAGCGTTAAAATAGGGAGAATGGAAGCAAATTTC
ATATAAGCGTTTGGAATAAA

Downstream 100 bases:

>100_bases
TCTTCCCTCTGAAAAGTCGATGGGGTTAAGCTGCTCATTCCATCTCGGCTGGGCTGATGTCACGGGGATCCGAGTGCAGG
CGGAATTGTCCAGCAACCCC

Product: integrase

Products: NA

Alternate protein names: Phage Integrase Family Protein; Integrase Family Protein; Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Phage-Related Integrase; Phage Related Integrase; Integrase Protein; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase/Integrase; Prophage Integrase; Sigma-70 Region 4 Family; Tyrosine Site-Specific Integrase/Recombinase Protein

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MEKLTKRRLDALKPSKVGVEGSEQFLWDGELRGFGVRVSAAGLKSFIVQYRTPEGRHRRRVIGRYGLMTVEQARDAARDI
LMAVAKGCDPEEAATRTDDLTIGAVCDWYLDEAEAGRILGKRRRPIKASTLAMDRSRIDAHIKPLLGKRIINTLKLGDIE
GAQADIAAGKTSKARVGSRGGATTGGEGVAARTMSTLHSILEHAVRLGKITSNPAKGVRRLASTPRDRRLSRAEIEKLGK
AMRIAEQDGEHPTGLAAIRFFLMTGLRRMEGLALERAWLHDEEGSIRFPDTKSGAQTRVIGRAAVDLLLAQPQAGSRFFF
PADWGEGHFVGIVRVLDRLCAMARLEDVTPHTLRHTFASVAGDLGFSELTIAALLGHAARGVTQRYIHIDEALRLAADRV
ADEMADILDGKAAAARPSRRGALQTQNNRGQTRERGGQNIDAERL

Sequences:

>Translated_445_residues
MEKLTKRRLDALKPSKVGVEGSEQFLWDGELRGFGVRVSAAGLKSFIVQYRTPEGRHRRRVIGRYGLMTVEQARDAARDI
LMAVAKGCDPEEAATRTDDLTIGAVCDWYLDEAEAGRILGKRRRPIKASTLAMDRSRIDAHIKPLLGKRIINTLKLGDIE
GAQADIAAGKTSKARVGSRGGATTGGEGVAARTMSTLHSILEHAVRLGKITSNPAKGVRRLASTPRDRRLSRAEIEKLGK
AMRIAEQDGEHPTGLAAIRFFLMTGLRRMEGLALERAWLHDEEGSIRFPDTKSGAQTRVIGRAAVDLLLAQPQAGSRFFF
PADWGEGHFVGIVRVLDRLCAMARLEDVTPHTLRHTFASVAGDLGFSELTIAALLGHAARGVTQRYIHIDEALRLAADRV
ADEMADILDGKAAAARPSRRGALQTQNNRGQTRERGGQNIDAERL
>Mature_445_residues
MEKLTKRRLDALKPSKVGVEGSEQFLWDGELRGFGVRVSAAGLKSFIVQYRTPEGRHRRRVIGRYGLMTVEQARDAARDI
LMAVAKGCDPEEAATRTDDLTIGAVCDWYLDEAEAGRILGKRRRPIKASTLAMDRSRIDAHIKPLLGKRIINTLKLGDIE
GAQADIAAGKTSKARVGSRGGATTGGEGVAARTMSTLHSILEHAVRLGKITSNPAKGVRRLASTPRDRRLSRAEIEKLGK
AMRIAEQDGEHPTGLAAIRFFLMTGLRRMEGLALERAWLHDEEGSIRFPDTKSGAQTRVIGRAAVDLLLAQPQAGSRFFF
PADWGEGHFVGIVRVLDRLCAMARLEDVTPHTLRHTFASVAGDLGFSELTIAALLGHAARGVTQRYIHIDEALRLAADRV
ADEMADILDGKAAAARPSRRGALQTQNNRGQTRERGGQNIDAERL

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48608; Mature: 48608

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLTKRRLDALKPSKVGVEGSEQFLWDGELRGFGVRVSAAGLKSFIVQYRTPEGRHRRR
CCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHH
VIGRYGLMTVEQARDAARDILMAVAKGCDPEEAATRTDDLTIGAVCDWYLDEAEAGRILG
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHHHHHHHHCHHHHHHHHH
KRRRPIKASTLAMDRSRIDAHIKPLLGKRIINTLKLGDIEGAQADIAAGKTSKARVGSRG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHCCCCC
GATTGGEGVAARTMSTLHSILEHAVRLGKITSNPAKGVRRLASTPRDRRLSRAEIEKLGK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
AMRIAEQDGEHPTGLAAIRFFLMTGLRRMEGLALERAWLHDEEGSIRFPDTKSGAQTRVI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHH
GRAAVDLLLAQPQAGSRFFFPADWGEGHFVGIVRVLDRLCAMARLEDVTPHTLRHTFASV
HHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AGDLGFSELTIAALLGHAARGVTQRYIHIDEALRLAADRVADEMADILDGKAAAARPSRR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
GALQTQNNRGQTRERGGQNIDAERL
CCCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MEKLTKRRLDALKPSKVGVEGSEQFLWDGELRGFGVRVSAAGLKSFIVQYRTPEGRHRRR
CCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHH
VIGRYGLMTVEQARDAARDILMAVAKGCDPEEAATRTDDLTIGAVCDWYLDEAEAGRILG
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHHHHHHHHCHHHHHHHHH
KRRRPIKASTLAMDRSRIDAHIKPLLGKRIINTLKLGDIEGAQADIAAGKTSKARVGSRG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHCCCCC
GATTGGEGVAARTMSTLHSILEHAVRLGKITSNPAKGVRRLASTPRDRRLSRAEIEKLGK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
AMRIAEQDGEHPTGLAAIRFFLMTGLRRMEGLALERAWLHDEEGSIRFPDTKSGAQTRVI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHH
GRAAVDLLLAQPQAGSRFFFPADWGEGHFVGIVRVLDRLCAMARLEDVTPHTLRHTFASV
HHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AGDLGFSELTIAALLGHAARGVTQRYIHIDEALRLAADRVADEMADILDGKAAAARPSRR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
GALQTQNNRGQTRERGGQNIDAERL
CCCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA