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The map label for this gene is patM [H]

Identifier: 158425495

GI number: 158425495

Start: 4422032

End: 4422715

Strand: Direct

Name: patM [H]

Synonym: AZC_3871

Alternate gene names: 158425495

Gene position: 4422032-4422715 (Clockwise)

Preceding gene: 158425494

Following gene: 158425496

Centisome position: 82.35

GC content: 61.11

Gene sequence:

>684_bases
TTGAGAGGGCCGGGTGCCGCCATGGATTTTGACGCCGCTTACCTCGCTCAGCAGTGGCCCGCCCTCATGGGCGGGCTGTG
GGTGACGTGCCAGGTCACGCTCCTCTCCATTGTCCTCTCCTTGCTCATCGGCCTCTTCGGCGCGGCCTTTCGGCTGTTCT
CCGTCCCGATTCTGTCGCAACTGACATTCGGCTATGTGGAACTGGTGCGGAATACGCCAATCCTGGTGCAGCTCTTCTTC
ATCTTCTACGGGCTGCCGGCCATCGGCCTCGGCATCTCGCAATTCTGGTCGGGCGTGCTGTGTCTCTCGCTCTGGGCGGG
TGCCTATCAGGTGGAGAATATCCGGGGTGGGCTGCTCACCATCGAGAAGGGGCTAAAGGAGGCGGCCTTCTCGCTCAGCC
TCAGCCTGCGCCAATATTTCCGGCTCGTGGCGCTGCCGCTGGCCATTCGGACCAGCCTTCCGTCCATGCTCAATACGTCC
ATTTCGCTGCTGAAGAACTCCTCCTATTTGCAGGCCATCGGCCTGGCGGAGATGACCTTCATCGCGGTGGACCGGATCGC
CACCGACTTTCGCGCGGTAGAAATGTTCACGGCCATCGGCGCGCTCTATCTGGCGCTGGTGATCGTGCTGAGCCTCATGA
CATCCATCGTTGAGCACAAGCTCAGGAAACCGTTTCGGGTCTGA

Upstream 100 bases:

>100_bases
ACGCCGAGAAGCTGTTTCGCGTTTGGGTGGAGAAATACGTCTCCGCGGAAGCGAGGCCCTATTATCTCGAGTTCTTCGAG
ACGCCGCGCCCCGATGAGAA

Downstream 100 bases:

>100_bases
CATGGATATCATCCTCGACAATTGGCCGCTGATCCAGAAGGGCCTTGGGATGACGCTGGGCCTCGCCGTCGTCACCCTTC
TGTTTTCCACCCTCGTGTCC

Product: amino acid ABC transporter permease/substrate-binding protein

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRGPGAAMDFDAAYLAQQWPALMGGLWVTCQVTLLSIVLSLLIGLFGAAFRLFSVPILSQLTFGYVELVRNTPILVQLFF
IFYGLPAIGLGISQFWSGVLCLSLWAGAYQVENIRGGLLTIEKGLKEAAFSLSLSLRQYFRLVALPLAIRTSLPSMLNTS
ISLLKNSSYLQAIGLAEMTFIAVDRIATDFRAVEMFTAIGALYLALVIVLSLMTSIVEHKLRKPFRV

Sequences:

>Translated_227_residues
MRGPGAAMDFDAAYLAQQWPALMGGLWVTCQVTLLSIVLSLLIGLFGAAFRLFSVPILSQLTFGYVELVRNTPILVQLFF
IFYGLPAIGLGISQFWSGVLCLSLWAGAYQVENIRGGLLTIEKGLKEAAFSLSLSLRQYFRLVALPLAIRTSLPSMLNTS
ISLLKNSSYLQAIGLAEMTFIAVDRIATDFRAVEMFTAIGALYLALVIVLSLMTSIVEHKLRKPFRV
>Mature_227_residues
MRGPGAAMDFDAAYLAQQWPALMGGLWVTCQVTLLSIVLSLLIGLFGAAFRLFSVPILSQLTFGYVELVRNTPILVQLFF
IFYGLPAIGLGISQFWSGVLCLSLWAGAYQVENIRGGLLTIEKGLKEAAFSLSLSLRQYFRLVALPLAIRTSLPSMLNTS
ISLLKNSSYLQAIGLAEMTFIAVDRIATDFRAVEMFTAIGALYLALVIVLSLMTSIVEHKLRKPFRV

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787030, Length=217, Percent_Identity=35.0230414746544, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1786874, Length=239, Percent_Identity=33.0543933054393, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788646, Length=166, Percent_Identity=34.9397590361446, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787086, Length=211, Percent_Identity=28.9099526066351, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI87082239, Length=194, Percent_Identity=32.4742268041237, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24918; Mature: 24918

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPGAAMDFDAAYLAQQWPALMGGLWVTCQVTLLSIVLSLLIGLFGAAFRLFSVPILSQ
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTFGYVELVRNTPILVQLFFIFYGLPAIGLGISQFWSGVLCLSLWAGAYQVENIRGGLLT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IEKGLKEAAFSLSLSLRQYFRLVALPLAIRTSLPSMLNTSISLLKNSSYLQAIGLAEMTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IAVDRIATDFRAVEMFTAIGALYLALVIVLSLMTSIVEHKLRKPFRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRGPGAAMDFDAAYLAQQWPALMGGLWVTCQVTLLSIVLSLLIGLFGAAFRLFSVPILSQ
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTFGYVELVRNTPILVQLFFIFYGLPAIGLGISQFWSGVLCLSLWAGAYQVENIRGGLLT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IEKGLKEAAFSLSLSLRQYFRLVALPLAIRTSLPSMLNTSISLLKNSSYLQAIGLAEMTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IAVDRIATDFRAVEMFTAIGALYLALVIVLSLMTSIVEHKLRKPFRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA