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The map label for this gene is trbC

Identifier: 158425483

GI number: 158425483

Start: 4411367

End: 4411699

Strand: Direct

Name: trbC

Synonym: AZC_3859

Alternate gene names: NA

Gene position: 4411367-4411699 (Clockwise)

Preceding gene: 158425482

Following gene: 158425484

Centisome position: 82.15

GC content: 65.47

Gene sequence:

>333_bases
ATGATCCCATCGCTCCATCGCGCACGCAGCGCCGCCCGACTGGCCCTGTCTGCCACCTGTATCAGCCTGATGGCCACGGC
CAGCGCTCATGCCTCCGGTTCCTCCATGCCATGGGAGGCGCCGCTGCAATCCATCCTCCAGTCGATCGAGGGGCCGGTCG
CCAAGATCATCGCCGTCATCGTCATCATCTCGACCGGGCTGGCGCTGGCCTTTGGCGACACGTCCGGTGGCTTCCGCCGG
CTGATCCAGATCGTGTTCGGCCTGTCGATCGCCTTCGCCGCATCGAGCTTCTTCCTGTCCTTCTTCTCGTTCGGCGGCGG
AGCGCTCGTCTGA

Upstream 100 bases:

>100_bases
GGCGCGGCAAGGCGCGCCGGCTCACCGAACTCGCTCGTGTCGAGGGCCTCGGCCCTGATGGCGACTACCGCGTCACCCCT
GTCCTTACCGGAGATCCCTC

Downstream 100 bases:

>100_bases
TGGCCGAGACGGTTGAGGTTCCCGGCTTCAGCGTTCCGGTCCACCGAGCACTGAATGAGCCGATCCTACTCGGCGGAGCA
CCGCGTGCCATCGCCATCGT

Product: conjugal transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIPSLHRARSAARLALSATCISLMATASAHASGSSMPWEAPLQSILQSIEGPVAKIIAVIVIISTGLALAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALV

Sequences:

>Translated_110_residues
MIPSLHRARSAARLALSATCISLMATASAHASGSSMPWEAPLQSILQSIEGPVAKIIAVIVIISTGLALAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALV
>Mature_110_residues
MIPSLHRARSAARLALSATCISLMATASAHASGSSMPWEAPLQSILQSIEGPVAKIIAVIVIISTGLALAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11301; Mature: 11301

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSLHRARSAARLALSATCISLMATASAHASGSSMPWEAPLQSILQSIEGPVAKIIAVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
VIISTGLALAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIPSLHRARSAARLALSATCISLMATASAHASGSSMPWEAPLQSILQSIEGPVAKIIAVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
VIISTGLALAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA