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The map label for this gene is nodS

Identifier: 158425439

GI number: 158425439

Start: 4369411

End: 4370034

Strand: Reverse

Name: nodS

Synonym: AZC_3815

Alternate gene names: 158425439

Gene position: 4370034-4369411 (Counterclockwise)

Preceding gene: 158425440

Following gene: 158425438

Centisome position: 81.38

GC content: 51.76

Gene sequence:

>624_bases
ATGGAAGACCCTGATTTGGTAGCTACGAATCTGAGCCCCGCTGGCGTCAAGGACCTGCTTAGAAAGGATCTCGACGCGCG
AGATCCGTGGAACATCAGCTCGTGCGAGTACGAGCAAAAACGTCTCCATGCAATCATGGAGCTGTGTCTTGGCGGCCGGA
CGCTAGGAGATGTACTCGAAATCGGCTGCGCGGCTGGGGCGCTCACCGAACGGCTGTCTATATATAGTCAGAGTCTAACG
GTCGTCGAACTTATGACTGAGGCGATAGCCAAAGCGCAAGAACGCGTCAACAACTCGGATATAATTTGGCATGAACAAGA
TGTCTGCCAAATGGATTTGAACGCAAAGTATGACACTATAATCTGCACCGAAGTTTTGTATTATATACATGAGAAAGAGA
GACTCAGAGGTGCATTGGAGAATATTGTTCAGCTGTTACGATCCGATGGGCAATTTATATTTGGCTCTCCTCGTAATGCG
GTATGCCGAAGTTGGGGGCATTTGTTTGGGGCGGAGGCGGTGCTCGAGCTGGCACAGAGCCGCCTCCGCATAGTTGATCT
ACGGCGCATCAACGGTGGACTGCCGGGGCAGGATTGTGTCATCGCGAAACTCACCCGACGTTGA

Upstream 100 bases:

>100_bases
TTTTAACGCCGTTAAAACTCTATGCCCTGTTAACCATTCGGGATAGTCGGTGGCTATCACGCGAGAGTTCCTAAAACATC
AGTTAATTTGTGGGAAAAAG

Downstream 100 bases:

>100_bases
GCAAGGCAATCTCTAACAAGGACCAGGGGCCGGACGATGAAGCGGTGCGGTTTGAAGTTGACCCACGACGGTGGAGTTGC
GGTGTTGGATGGGCGCGATC

Product: nodulation protein S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MEDPDLVATNLSPAGVKDLLRKDLDARDPWNISSCEYEQKRLHAIMELCLGGRTLGDVLEIGCAAGALTERLSIYSQSLT
VVELMTEAIAKAQERVNNSDIIWHEQDVCQMDLNAKYDTIICTEVLYYIHEKERLRGALENIVQLLRSDGQFIFGSPRNA
VCRSWGHLFGAEAVLELAQSRLRIVDLRRINGGLPGQDCVIAKLTRR

Sequences:

>Translated_207_residues
MEDPDLVATNLSPAGVKDLLRKDLDARDPWNISSCEYEQKRLHAIMELCLGGRTLGDVLEIGCAAGALTERLSIYSQSLT
VVELMTEAIAKAQERVNNSDIIWHEQDVCQMDLNAKYDTIICTEVLYYIHEKERLRGALENIVQLLRSDGQFIFGSPRNA
VCRSWGHLFGAEAVLELAQSRLRIVDLRRINGGLPGQDCVIAKLTRR
>Mature_207_residues
MEDPDLVATNLSPAGVKDLLRKDLDARDPWNISSCEYEQKRLHAIMELCLGGRTLGDVLEIGCAAGALTERLSIYSQSLT
VVELMTEAIAKAQERVNNSDIIWHEQDVCQMDLNAKYDTIICTEVLYYIHEKERLRGALENIVQLLRSDGQFIFGSPRNA
VCRSWGHLFGAEAVLELAQSRLRIVDLRRINGGLPGQDCVIAKLTRR

Specific function: SAM-utilizing methyltransferase involved in nod factor synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nodS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NODS_AZOC5 (Q07758)

Other databases:

- EMBL:   L18897
- EMBL:   AP009384
- PIR:   JQ0397
- RefSeq:   YP_001526731.1
- ProteinModelPortal:   Q07758
- SMR:   Q07758
- GeneID:   5688809
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_3815
- HOGENOM:   HBG334848
- OMA:   VAEVLYY
- ProtClustDB:   CLSK864444
- BioCyc:   ACAU438753:AZC_3815-MONOMER
- GO:   GO:0009877
- InterPro:   IPR020944
- InterPro:   IPR008715
- PIRSF:   PIRSF009310

Pfam domain/function: PF05401 NodS

EC number: NA

Molecular weight: Translated: 23226; Mature: 23226

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDPDLVATNLSPAGVKDLLRKDLDARDPWNISSCEYEQKRLHAIMELCLGGRTLGDVLE
CCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
IGCAAGALTERLSIYSQSLTVVELMTEAIAKAQERVNNSDIIWHEQDVCQMDLNAKYDTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCHHH
ICTEVLYYIHEKERLRGALENIVQLLRSDGQFIFGSPRNAVCRSWGHLFGAEAVLELAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
RLRIVDLRRINGGLPGQDCVIAKLTRR
HHHHHHHHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MEDPDLVATNLSPAGVKDLLRKDLDARDPWNISSCEYEQKRLHAIMELCLGGRTLGDVLE
CCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
IGCAAGALTERLSIYSQSLTVVELMTEAIAKAQERVNNSDIIWHEQDVCQMDLNAKYDTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCHHH
ICTEVLYYIHEKERLRGALENIVQLLRSDGQFIFGSPRNAVCRSWGHLFGAEAVLELAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
RLRIVDLRRINGGLPGQDCVIAKLTRR
HHHHHHHHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2615763; 8412659