| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425430
Identifier: 158425430
GI number: 158425430
Start: 4359536
End: 4360141
Strand: Reverse
Name: 158425430
Synonym: AZC_3806
Alternate gene names: NA
Gene position: 4360141-4359536 (Counterclockwise)
Preceding gene: 158425431
Following gene: 158425429
Centisome position: 81.2
GC content: 63.7
Gene sequence:
>606_bases GTGCCAGAGCGCTATGGTCCGCGCACAACCCTCTATAACCGCTTCGTGTGCTGGCGGGCGGCGGGGGTCTGGGACAAGTT GCTGGAAGCTGTCTCGACGGCCTATGACGGGGACATCGTCATGATCGATAGCTCCTGCGTTCGCGTTCACCAGCACGGCG GTCAAAAAGGGGGCGATGATGATCGTTGCATGGGACGCTCCAGGGGTGGACTGACCACGAAGATCCACGCCTTGGTCGAC GCTGAGGGCCGGCCGATCCACTTCCGGCTCACCGCCGGCCAGGCCGGCGATGCGCCTGTGGGCCGCGAACTTTTGGCTCA CGCCCCAACCGGCAGCATCCTTCTCGCCGACAAGGCCTACGACACCGACGCCATCCGCGCCGAGACGGCAGAACGCGGCG CCTTCGCCAATGTGCCGCCACGTGTTATCCGCAAGCGGACCTTCCCCTTCAACCCATGGCTCTATCGCCAGAGGAAGCAG ATCGAGCGCTTCTTCAACCGCTTCAAGCAGATGCGAGGCCTCGCCACGCGATACGTTCGCCGCCCGGACAATTTCCTCGC GGCCCTCAAGCTCGCCGCAACACGCATCTGGATCAATGCGTTATGA
Upstream 100 bases:
>100_bases GCTGCTGCCGAACAAGGTGCGGGGCGTGGCGAGGGTGGACGACCGCCGGGTGATCAACGGTATCCTCTGACGCTTTCGAA CCGGCGCGCCGTGGCGGGAC
Downstream 100 bases:
>100_bases ATCCGACGCCTAGCACTACTTTGGCATATTTTTGGGAGCGTGAGGCGTTTTTGGGATTCCCGCGGCGGTGTTTGCGTGAT TCATGGGTGGTCGGCTTTCT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPERYGPRTTLYNRFVCWRAAGVWDKLLEAVSTAYDGDIVMIDSSCVRVHQHGGQKGGDDDRCMGRSRGGLTTKIHALVD AEGRPIHFRLTAGQAGDAPVGRELLAHAPTGSILLADKAYDTDAIRAETAERGAFANVPPRVIRKRTFPFNPWLYRQRKQ IERFFNRFKQMRGLATRYVRRPDNFLAALKLAATRIWINAL
Sequences:
>Translated_201_residues MPERYGPRTTLYNRFVCWRAAGVWDKLLEAVSTAYDGDIVMIDSSCVRVHQHGGQKGGDDDRCMGRSRGGLTTKIHALVD AEGRPIHFRLTAGQAGDAPVGRELLAHAPTGSILLADKAYDTDAIRAETAERGAFANVPPRVIRKRTFPFNPWLYRQRKQ IERFFNRFKQMRGLATRYVRRPDNFLAALKLAATRIWINAL >Mature_200_residues PERYGPRTTLYNRFVCWRAAGVWDKLLEAVSTAYDGDIVMIDSSCVRVHQHGGQKGGDDDRCMGRSRGGLTTKIHALVDA EGRPIHFRLTAGQAGDAPVGRELLAHAPTGSILLADKAYDTDAIRAETAERGAFANVPPRVIRKRTFPFNPWLYRQRKQI ERFFNRFKQMRGLATRYVRRPDNFLAALKLAATRIWINAL
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 22698; Mature: 22567
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERYGPRTTLYNRFVCWRAAGVWDKLLEAVSTAYDGDIVMIDSSCVRVHQHGGQKGGDD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCH DRCMGRSRGGLTTKIHALVDAEGRPIHFRLTAGQAGDAPVGRELLAHAPTGSILLADKAY HHHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCC DTDAIRAETAERGAFANVPPRVIRKRTFPFNPWLYRQRKQIERFFNRFKQMRGLATRYVR CCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPDNFLAALKLAATRIWINAL CCHHHHHHHHHHHHHHEEECC >Mature Secondary Structure PERYGPRTTLYNRFVCWRAAGVWDKLLEAVSTAYDGDIVMIDSSCVRVHQHGGQKGGDD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCH DRCMGRSRGGLTTKIHALVDAEGRPIHFRLTAGQAGDAPVGRELLAHAPTGSILLADKAY HHHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCC DTDAIRAETAERGAFANVPPRVIRKRTFPFNPWLYRQRKQIERFFNRFKQMRGLATRYVR CCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPDNFLAALKLAATRIWINAL CCHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8126444 [H]