Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158425429

Identifier: 158425429

GI number: 158425429

Start: 4358122

End: 4359453

Strand: Reverse

Name: 158425429

Synonym: AZC_3805

Alternate gene names: NA

Gene position: 4359453-4358122 (Counterclockwise)

Preceding gene: 158425430

Following gene: 158425428

Centisome position: 81.19

GC content: 66.89

Gene sequence:

>1332_bases
ATGGGTGGTCGGCTTTCTGGAGGGCCGACCATGGATGAGAGTTGGAAGTCCGACCTCGAACAGTGGCTTGCGCCCTTTCT
TGGTGCCCTGCGGCACAAGGTTCGGGCGCGGATGTGTCCGGCCTATGTGGCGGGGCTGATCGGAGCGGGCGAGCGCAAGA
GCATCCAGCCGATGGCGGCCCGCAACGGCGAGGTTGGCTACGACCAGCTCCATCACTTCATCACCAGTGGCGTTTGGGAT
GCCGCGCCATTGGAGAAGGTCCTGCTCGCCGAGGCCGACAGGATGATCGGCGGCGCCGAGGCCTGGCTGATCGTTGATGA
CACGGCGCTGCCGAAGAAGGGAGAGCGCTCGGTCGGCGTCGCGCCGCAATACGCCTCGGCCCTGGGTAAGACCGCCAACT
GCCAGACCCTGGTATCGCTGACGCTGGCGTCCGGCGAAGTTCCGGTCATGGTGGGGTTGCGCCTGTTCCTGCCCGAGAGC
TGGACAAGCGATCCGGCACGATTGGCCCGCGCGGGTGTGCCGGATGATCATGCAGGCTATCGGAGCAAGCCCGAGATCGC
GCTCGCCGAGATTGATCGGGCACGCACGGCGGGCCTGCGCTTCGGCTGCGTGCTGGCTGATGCTGGATATAGCCTCTCCG
CGTCGTTCCGGCAGGCTTTGAGTGCGCGCGGCCTCACCTGGGCCGTCGGCATCGGGGCGCGCCAGAAGGTCTATCCGGCC
GACGTGGCTCTTGTCTTTCCCGTCTCCGGGCGTGGCCGCCCGCGCAAGAACCCCGTGCCCGATGCCACGTCGGTCTCCGC
GGAGAAGACGCTGGCGACGGCACGCTGGCGCGCGTTGAGTTGGCGGCGTGGCACCAAGGTGCCCCTGAGAGCCCGCTTCG
CTGCCGTGCGGATCAGGGTGGCGGACGGGCCACCCCAGCGCATCGGCGCCATGGGACAGCAGCATCTGCCGGGCGAAGAG
GCCTGGCTGATCGGCGAGCGCCGCTCGAATGGGGAGCGCAAATACTATCTCTCGAACCTGCCGGCTGGCACACCGCTCAA
GCGCCTGGCCGGCGCGATCAAAGCCCGCTGGATCTGCGAGCAGGCGCATCAGCAACTGAAGGAGGAACTCGGCCTCGATC
ACTTCGAGGGACGATCATGGACGGGGCTTCACCGGCATGCACTCATGACCATGATCGCCTACGCCTTCCTCCAATCCCGC
CGCCTCAAGCAGGCAAAGCGGGAAAAAAAGAAACCAGGGTCCGCCGCCCCAGCCCACCCTGCCGGCGATCCGCGCGGCCA
TCATCGCCAGGCTCGAACCGTCACCGAGAATACGATGTCCGCACTGCCGTAG

Upstream 100 bases:

>100_bases
TGGATCAATGCGTTATGAATCCGACGCCTAGCACTACTTTGGCATATTTTTGGGAGCGTGAGGCGTTTTTGGGATTCCCG
CGGCGGTGTTTGCGTGATTC

Downstream 100 bases:

>100_bases
ACCGATCGAATCTAAAAATATGCCAAAGTAGTGCTAGCTAGGCAGGTGGCGCAAACGTCAGGACTGCGGACCGAGGGGGG
CGTAGGGCCTTCAGAACCGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MGGRLSGGPTMDESWKSDLEQWLAPFLGALRHKVRARMCPAYVAGLIGAGERKSIQPMAARNGEVGYDQLHHFITSGVWD
AAPLEKVLLAEADRMIGGAEAWLIVDDTALPKKGERSVGVAPQYASALGKTANCQTLVSLTLASGEVPVMVGLRLFLPES
WTSDPARLARAGVPDDHAGYRSKPEIALAEIDRARTAGLRFGCVLADAGYSLSASFRQALSARGLTWAVGIGARQKVYPA
DVALVFPVSGRGRPRKNPVPDATSVSAEKTLATARWRALSWRRGTKVPLRARFAAVRIRVADGPPQRIGAMGQQHLPGEE
AWLIGERRSNGERKYYLSNLPAGTPLKRLAGAIKARWICEQAHQQLKEELGLDHFEGRSWTGLHRHALMTMIAYAFLQSR
RLKQAKREKKKPGSAAPAHPAGDPRGHHRQARTVTENTMSALP

Sequences:

>Translated_443_residues
MGGRLSGGPTMDESWKSDLEQWLAPFLGALRHKVRARMCPAYVAGLIGAGERKSIQPMAARNGEVGYDQLHHFITSGVWD
AAPLEKVLLAEADRMIGGAEAWLIVDDTALPKKGERSVGVAPQYASALGKTANCQTLVSLTLASGEVPVMVGLRLFLPES
WTSDPARLARAGVPDDHAGYRSKPEIALAEIDRARTAGLRFGCVLADAGYSLSASFRQALSARGLTWAVGIGARQKVYPA
DVALVFPVSGRGRPRKNPVPDATSVSAEKTLATARWRALSWRRGTKVPLRARFAAVRIRVADGPPQRIGAMGQQHLPGEE
AWLIGERRSNGERKYYLSNLPAGTPLKRLAGAIKARWICEQAHQQLKEELGLDHFEGRSWTGLHRHALMTMIAYAFLQSR
RLKQAKREKKKPGSAAPAHPAGDPRGHHRQARTVTENTMSALP
>Mature_442_residues
GGRLSGGPTMDESWKSDLEQWLAPFLGALRHKVRARMCPAYVAGLIGAGERKSIQPMAARNGEVGYDQLHHFITSGVWDA
APLEKVLLAEADRMIGGAEAWLIVDDTALPKKGERSVGVAPQYASALGKTANCQTLVSLTLASGEVPVMVGLRLFLPESW
TSDPARLARAGVPDDHAGYRSKPEIALAEIDRARTAGLRFGCVLADAGYSLSASFRQALSARGLTWAVGIGARQKVYPAD
VALVFPVSGRGRPRKNPVPDATSVSAEKTLATARWRALSWRRGTKVPLRARFAAVRIRVADGPPQRIGAMGQQHLPGEEA
WLIGERRSNGERKYYLSNLPAGTPLKRLAGAIKARWICEQAHQQLKEELGLDHFEGRSWTGLHRHALMTMIAYAFLQSRR
LKQAKREKKKPGSAAPAHPAGDPRGHHRQARTVTENTMSALP

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48176; Mature: 48045

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGRLSGGPTMDESWKSDLEQWLAPFLGALRHKVRARMCPAYVAGLIGAGERKSIQPMAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
RNGEVGYDQLHHFITSGVWDAAPLEKVLLAEADRMIGGAEAWLIVDDTALPKKGERSVGV
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC
APQYASALGKTANCQTLVSLTLASGEVPVMVGLRLFLPESWTSDPARLARAGVPDDHAGY
CHHHHHHHCCCCCCCEEEEEEECCCCCCCEECHHEECCCCCCCCHHHHHHCCCCCCCCCC
RSKPEIALAEIDRARTAGLRFGCVLADAGYSLSASFRQALSARGLTWAVGIGARQKVYPA
CCCCCEEHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC
DVALVFPVSGRGRPRKNPVPDATSVSAEKTLATARWRALSWRRGTKVPLRARFAAVRIRV
CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEEE
ADGPPQRIGAMGQQHLPGEEAWLIGERRSNGERKYYLSNLPAGTPLKRLAGAIKARWICE
CCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
QAHQQLKEELGLDHFEGRSWTGLHRHALMTMIAYAFLQSRRLKQAKREKKKPGSAAPAHP
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AGDPRGHHRQARTVTENTMSALP
CCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GGRLSGGPTMDESWKSDLEQWLAPFLGALRHKVRARMCPAYVAGLIGAGERKSIQPMAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
RNGEVGYDQLHHFITSGVWDAAPLEKVLLAEADRMIGGAEAWLIVDDTALPKKGERSVGV
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC
APQYASALGKTANCQTLVSLTLASGEVPVMVGLRLFLPESWTSDPARLARAGVPDDHAGY
CHHHHHHHCCCCCCCEEEEEEECCCCCCCEECHHEECCCCCCCCHHHHHHCCCCCCCCCC
RSKPEIALAEIDRARTAGLRFGCVLADAGYSLSASFRQALSARGLTWAVGIGARQKVYPA
CCCCCEEHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC
DVALVFPVSGRGRPRKNPVPDATSVSAEKTLATARWRALSWRRGTKVPLRARFAAVRIRV
CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEEE
ADGPPQRIGAMGQQHLPGEEAWLIGERRSNGERKYYLSNLPAGTPLKRLAGAIKARWICE
CCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
QAHQQLKEELGLDHFEGRSWTGLHRHALMTMIAYAFLQSRRLKQAKREKKKPGSAAPAHP
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AGDPRGHHRQARTVTENTMSALP
CCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]