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The map label for this gene is 158425417

Identifier: 158425417

GI number: 158425417

Start: 4348582

End: 4348908

Strand: Reverse

Name: 158425417

Synonym: AZC_3793

Alternate gene names: NA

Gene position: 4348908-4348582 (Counterclockwise)

Preceding gene: 158425418

Following gene: 158425414

Centisome position: 80.99

GC content: 62.08

Gene sequence:

>327_bases
ATGGGCCAGGTTCTCCATCGGTGCGCCACGACGACAGATGCGGTCCGTCGAGCGATACAGCATAGTCAAGAGAGCCTAAG
GGCCCGGGCGAAGCGCGACGGGATTAACCAGAAAACAGCCCCCAGGTGGAAGCAGCGCAATTCAGTTGCTGACCTGCCGA
CCGGCCCGAAAGCCCCGAAGTCAACGGTTCTGTCTGGCGAGGAAGAGGCGATCATCGTCGCCTTCCGGCACCACACACAC
CCCTCAAGGATTTCAGGCGCTTCGCCACACGATATGACCCGCTCGCGACCAACTTCCTGGCTCCCGTCTCCACCGCCGCA
GCCGTAA

Upstream 100 bases:

>100_bases
TTGCCTCAGGATGACTGCTATAGCTCATCAGGAAGCAGCCTAGGTGTTTGATCCCGGACTTTGATGGTGCAGTCTTTTCG
CAGGAATGGAAGGATGCGCT

Downstream 100 bases:

>100_bases
GCTATTCGTTATGAGTCTGGGTCCTAAGGCTAAAAAAGCCTACTCACGGAGGGTCTATCAAGGGTAATTAGCCACCATGA
GTAGGTCGCCTCAGTTTCTG

Product: integrase

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase; Transposase; Integrase Protein; Instegrase; Integrase Catalytic Domain-Containing Protein; Integrase Catalytic Core

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MGQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPKSTVLSGEEEAIIVAFRHHTH
PSRISGASPHDMTRSRPTSWLPSPPPQP

Sequences:

>Translated_108_residues
MGQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPKSTVLSGEEEAIIVAFRHHTH
PSRISGASPHDMTRSRPTSWLPSPPPQP
>Mature_107_residues
GQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPKSTVLSGEEEAIIVAFRHHTHP
SRISGASPHDMTRSRPTSWLPSPPPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11943; Mature: 11811

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPK
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC
STVLSGEEEAIIVAFRHHTHPSRISGASPHDMTRSRPTSWLPSPPPQP
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPK
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC
STVLSGEEEAIIVAFRHHTHPSRISGASPHDMTRSRPTSWLPSPPPQP
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA