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The map label for this gene is 158425380

Identifier: 158425380

GI number: 158425380

Start: 4310179

End: 4310826

Strand: Direct

Name: 158425380

Synonym: AZC_3756

Alternate gene names: NA

Gene position: 4310179-4310826 (Clockwise)

Preceding gene: 158425379

Following gene: 158425381

Centisome position: 80.27

GC content: 72.69

Gene sequence:

>648_bases
ATGATCTCCGGCTACCTGCCCGGCCGCTCGCCGCTGCATCGCCTGCCGGCAGGGTGGAAGCTCGCGGGGCTCGCCGGATT
GAGCGTGCTGCTGCTTCCCGCCCAGAGCCCGCTGCTGCTGGGCGCCGGCCTCGCCGTGGTGCTCTGCGCCTACGCCGCCC
TCGGCCGTCCGGCCCTCGCGCGGCTCGGCCTGCTGCGGCCGCTGCTGCCCATCCTCGCGCTCATGCTGGTGCTGCAACTC
TGGGCTCAGGACTGGTCGCCCGCCGGCCTTGTCTCCGGCCTCGTGATCGTGATGCGCATCCTGCTCATGGTGATGCTGGC
GGATCTCGTGACCCTCTCGACCCCGCTTCAGGACATGATGGACGTTCTGGAGCGGCTCGCCAGCCCATTGCGGCGGCTGG
GGCTTGAGCCGCGCCGGCTGGCGCTGGCGGTGGCGCTGGTGCTGCGCTTCGTGCCGGTGCTCCTCGCCTCCTGGCAGGCC
CGGACCGAGGCCTGGCGGGCCCGCAGCCCGCGCCGGCCGGGGCTAGCCCTACTGCCGGGCTTCCTGATCCAGACCCTGCG
CATCGCGGACCGTGTGGCCGAGGCTCTTGATGCCCGCGGCTTTGCGCGGCATGACACGGGCCGATCCCGCGAGACGAGGA
CCCAATGA

Upstream 100 bases:

>100_bases
TGGAGGCCGGCGCGGTGAAGGCAGACGGGCCGCCCGATGCCGTGCTGCCGGCCTATCGCGCCCATGAGGAGACGCGGGCG
CGGACGCTCGGGGACCTGTC

Downstream 100 bases:

>100_bases
GCAAGGCCGCCCCCCTGGAGACCCGCGCGCTGGTGCGCATCGCCCTCTTCGCCGCGCTCATGGGCATGCTCGGGCTGGTG
CCGCCCATCCACCTGCCCTT

Product: cobalt transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MISGYLPGRSPLHRLPAGWKLAGLAGLSVLLLPAQSPLLLGAGLAVVLCAYAALGRPALARLGLLRPLLPILALMLVLQL
WAQDWSPAGLVSGLVIVMRILLMVMLADLVTLSTPLQDMMDVLERLASPLRRLGLEPRRLALAVALVLRFVPVLLASWQA
RTEAWRARSPRRPGLALLPGFLIQTLRIADRVAEALDARGFARHDTGRSRETRTQ

Sequences:

>Translated_215_residues
MISGYLPGRSPLHRLPAGWKLAGLAGLSVLLLPAQSPLLLGAGLAVVLCAYAALGRPALARLGLLRPLLPILALMLVLQL
WAQDWSPAGLVSGLVIVMRILLMVMLADLVTLSTPLQDMMDVLERLASPLRRLGLEPRRLALAVALVLRFVPVLLASWQA
RTEAWRARSPRRPGLALLPGFLIQTLRIADRVAEALDARGFARHDTGRSRETRTQ
>Mature_215_residues
MISGYLPGRSPLHRLPAGWKLAGLAGLSVLLLPAQSPLLLGAGLAVVLCAYAALGRPALARLGLLRPLLPILALMLVLQL
WAQDWSPAGLVSGLVIVMRILLMVMLADLVTLSTPLQDMMDVLERLASPLRRLGLEPRRLALAVALVLRFVPVLLASWQA
RTEAWRARSPRRPGLALLPGFLIQTLRIADRVAEALDARGFARHDTGRSRETRTQ

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR003339 [H]

Pfam domain/function: PF00005 ABC_tran; PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 23369; Mature: 23369

Theoretical pI: Translated: 12.20; Mature: 12.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGYLPGRSPLHRLPAGWKLAGLAGLSVLLLPAQSPLLLGAGLAVVLCAYAALGRPALA
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
RLGLLRPLLPILALMLVLQLWAQDWSPAGLVSGLVIVMRILLMVMLADLVTLSTPLQDMM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DVLERLASPLRRLGLEPRRLALAVALVLRFVPVLLASWQARTEAWRARSPRRPGLALLPG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FLIQTLRIADRVAEALDARGFARHDTGRSRETRTQ
HHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
>Mature Secondary Structure
MISGYLPGRSPLHRLPAGWKLAGLAGLSVLLLPAQSPLLLGAGLAVVLCAYAALGRPALA
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
RLGLLRPLLPILALMLVLQLWAQDWSPAGLVSGLVIVMRILLMVMLADLVTLSTPLQDMM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DVLERLASPLRRLGLEPRRLALAVALVLRFVPVLLASWQARTEAWRARSPRRPGLALLPG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FLIQTLRIADRVAEALDARGFARHDTGRSRETRTQ
HHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]