| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425365
Identifier: 158425365
GI number: 158425365
Start: 4293451
End: 4294479
Strand: Reverse
Name: 158425365
Synonym: AZC_3741
Alternate gene names: NA
Gene position: 4294479-4293451 (Counterclockwise)
Preceding gene: 158425371
Following gene: 158425362
Centisome position: 79.98
GC content: 70.17
Gene sequence:
>1029_bases ATGGTCGGTGTGCGTTCCGCCGCGTGGCGGATGGGCCTGTGGGCCTGTGCGATGTGGGCCGCTCTGGGGGCGGCGACGGC CCGCGCGGAAGTGGTGGAACGGACGATGACGGCGGGGACCGAGCAGCGGTCCTTCCTGCTGTCGCGCCCGTCCGGAGCGA CGACACCGCTGCCGGTGGTGATCGCCCTGCACGGGGCGGGCGAGAGCGCGGAAGGCTTCATGGGCTATCTCGGCCTTGAG GAGACCGCCGCGCGCAACCGCTTCGTCGCCGTCTATCCGCAGGGAATCGGCCGGGTGTGGAACGACGGCCGGCCTGCGGC CATGCGCCTGAAGGCGATGCTGACGCCCGGCGACGACGTGACCTTCCTCGTCACCCTGACCCAGCAACTGGTGGCCGAAG GCATCGCTGATCCCAACCGCATCTACATGATGGGCATCTCCAACGGTGGCTTCATGGTGGAGCGGATGGCCTGCGAGCAT GCCGATCTCTATGCGGCCTTCTCGGTCATCATGGCGACGGCGCCCGCCAATTATCGCGAGCAGTGCCGCCCCAGCCGGCC GGTGCCCATCATGTTCATTCACGGCACGGCCGATCCGGTCATCGCCTGGGACGGCTTCTGGACGCCCATGGGCGCCACCC TTTCCGCCCCCGACAGCGCCCAGCTCTATGCCGCGCTGAACGGCTGCGGCGAATCGCAGGTGCAGGATCTGCCGGACCTT AACCGCCTCGACGGCACCACCGTCTCCGTCCGGCGCTGGGAGGGCTGCACGCCGCCCGGCGAAGTGGCGCTCTATCGGGT GGAGCGGGGCGGCCACCAGTCCCCGGCGCGGGTCAAGACGACGCCCGAGCTGGCCACGGTCTTCCTCGGCCTGCGCAATG GCGACATCGACGCCGGGATGGAGAGCTGGGCTTTGTTCTCCCGCCATTCCCTCGCCCCGCCAACGCCCGTTGCGGCGCCT GCAGCTGTGCCCCTCCCGGCCCGGCCGCCCCAGAAGCCGCGCTCCAGCCGGGCGCAGGCTGTTCAATAA
Upstream 100 bases:
>100_bases CTTTCGGGGGCGTGTGAAGCCGCACCGCGTGCGGAGCCTGTGACGGGAAGACGCGGCCGGACGGCCCGAGCTTCCGCCAA GGTGTGGAGAAAAGGGGCCG
Downstream 100 bases:
>100_bases GAGAGGGAGCGGACGGCTGTGGCGCCCTTGGAGCGCCATGGTGTTGAGCCTCCGGCGCTGGGCCGCCACCGTCTTCATCG CACCGGTGGGCCAATCCCAA
Product: poly(3-hydroxybutyrate) depolymerase precursor
Products: NA
Alternate protein names: Polyhydroxybutyrate Depolymerase; Phospholipase/Carboxylesterase; Lipoprotein; Esterase; Secreted Hydrolase; Esterase Lipoprotein LpqC; Secreted Esterase; Lipoprotein LpqP; Esterase/Lipase/Thioesterase; Esterase Lipoprotein; Hydrolase; Feruloyl Esterase; Poly(3-Hydroxybutyrate) Depolymerase; Feruloyl Esterase B; Poly(3-Hydroxyalkanoate) Depolymerase; Carbohydrate Esterase Family 1 Protein; Alpha/Beta Family Hydrolase; LOW QUALITY PROTEIN Esterase Lipoprotein LpqC; Exported Esterase/Hydrolase; Esterase-Like Protein; Poly(3-Hydroxybutyrate) Depolymerase-Like; Secreted Protein
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MVGVRSAAWRMGLWACAMWAALGAATARAEVVERTMTAGTEQRSFLLSRPSGATTPLPVVIALHGAGESAEGFMGYLGLE ETAARNRFVAVYPQGIGRVWNDGRPAAMRLKAMLTPGDDVTFLVTLTQQLVAEGIADPNRIYMMGISNGGFMVERMACEH ADLYAAFSVIMATAPANYREQCRPSRPVPIMFIHGTADPVIAWDGFWTPMGATLSAPDSAQLYAALNGCGESQVQDLPDL NRLDGTTVSVRRWEGCTPPGEVALYRVERGGHQSPARVKTTPELATVFLGLRNGDIDAGMESWALFSRHSLAPPTPVAAP AAVPLPARPPQKPRSSRAQAVQ
Sequences:
>Translated_342_residues MVGVRSAAWRMGLWACAMWAALGAATARAEVVERTMTAGTEQRSFLLSRPSGATTPLPVVIALHGAGESAEGFMGYLGLE ETAARNRFVAVYPQGIGRVWNDGRPAAMRLKAMLTPGDDVTFLVTLTQQLVAEGIADPNRIYMMGISNGGFMVERMACEH ADLYAAFSVIMATAPANYREQCRPSRPVPIMFIHGTADPVIAWDGFWTPMGATLSAPDSAQLYAALNGCGESQVQDLPDL NRLDGTTVSVRRWEGCTPPGEVALYRVERGGHQSPARVKTTPELATVFLGLRNGDIDAGMESWALFSRHSLAPPTPVAAP AAVPLPARPPQKPRSSRAQAVQ >Mature_342_residues MVGVRSAAWRMGLWACAMWAALGAATARAEVVERTMTAGTEQRSFLLSRPSGATTPLPVVIALHGAGESAEGFMGYLGLE ETAARNRFVAVYPQGIGRVWNDGRPAAMRLKAMLTPGDDVTFLVTLTQQLVAEGIADPNRIYMMGISNGGFMVERMACEH ADLYAAFSVIMATAPANYREQCRPSRPVPIMFIHGTADPVIAWDGFWTPMGATLSAPDSAQLYAALNGCGESQVQDLPDL NRLDGTTVSVRRWEGCTPPGEVALYRVERGGHQSPARVKTTPELATVFLGLRNGDIDAGMESWALFSRHSLAPPTPVAAP AAVPLPARPPQKPRSSRAQAVQ
Specific function: Unknown
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36632; Mature: 36632
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGVRSAAWRMGLWACAMWAALGAATARAEVVERTMTAGTEQRSFLLSRPSGATTPLPVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCEEE IALHGAGESAEGFMGYLGLEETAARNRFVAVYPQGIGRVWNDGRPAAMRLKAMLTPGDDV EEEECCCCCCCCCEEECCCHHHHHCCCEEEEEECCCCHHCCCCCCCEEEEEEEECCCCCE TFLVTLTQQLVAEGIADPNRIYMMGISNGGFMVERMACEHADLYAAFSVIMATAPANYRE EEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHH QCRPSRPVPIMFIHGTADPVIAWDGFWTPMGATLSAPDSAQLYAALNGCGESQVQDLPDL HCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEECCCCCCEEHHHHHCCCCHHHHCCCCC NRLDGTTVSVRRWEGCTPPGEVALYRVERGGHQSPARVKTTPELATVFLGLRNGDIDAGM HHCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEECCHHHEEEEEECCCCCCCCCH ESWALFSRHSLAPPTPVAAPAAVPLPARPPQKPRSSRAQAVQ HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MVGVRSAAWRMGLWACAMWAALGAATARAEVVERTMTAGTEQRSFLLSRPSGATTPLPVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCEEE IALHGAGESAEGFMGYLGLEETAARNRFVAVYPQGIGRVWNDGRPAAMRLKAMLTPGDDV EEEECCCCCCCCCEEECCCHHHHHCCCEEEEEECCCCHHCCCCCCCEEEEEEEECCCCCE TFLVTLTQQLVAEGIADPNRIYMMGISNGGFMVERMACEHADLYAAFSVIMATAPANYRE EEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHH QCRPSRPVPIMFIHGTADPVIAWDGFWTPMGATLSAPDSAQLYAALNGCGESQVQDLPDL HCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEECCCCCCEEHHHHHCCCCHHHHCCCCC NRLDGTTVSVRRWEGCTPPGEVALYRVERGGHQSPARVKTTPELATVFLGLRNGDIDAGM HHCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEECCHHHEEEEEECCCCCCCCCH ESWALFSRHSLAPPTPVAAPAAVPLPARPPQKPRSSRAQAVQ HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA