| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425349
Identifier: 158425349
GI number: 158425349
Start: 4275294
End: 4276043
Strand: Direct
Name: 158425349
Synonym: AZC_3725
Alternate gene names: NA
Gene position: 4275294-4276043 (Clockwise)
Preceding gene: 158425348
Following gene: 158425352
Centisome position: 79.62
GC content: 74.53
Gene sequence:
>750_bases ATGAGCCCGCAGGATCGCGCGGCCCTCGCGGGCGAGTATGTGCTCGGGCTCGTGGACGGCGAGGAAGCTGCACGCTGCGC ACGCCTCGCCGAGACCGATCCCGCCTTCGCGGCGGAGGTCGCAGGCTGGCGCAGGCGGCTGGGCAGCCTCGATGCAACGG CGGACGCGGTGCCGCCCTCCCCCGCCCTGTGGGAGCGGATCTCCGCCTCCGTGGCGGACACAGCGACATCTCAGGCTCCG GGCGAACCCGAGGCCCGCACGGCGGATGCGGGCTCTGACCGCGTGGCGCCCTTCCGGCACGGGCGCGCCTGGGACAACCT GCCCCTGTGGCGCGGCATCGGCGTGACGGCGGCGGCCGCGGCGCTGGCGCTCGCCATCGGGCTCGGCGCCGCCCTGCGCG AAGCCGCCCGGACGCCGGTGCTCGTGGCGGTGCTGCTCTCCGACCAGAACCGCCCGGCGGCAGTGGTGAACACCTTCCGG GACGGGCGCTCCGAACTCGTGCCGCTGGAAGCCATCCGCGCGCCGGAGGGCAAGGCGCTTCAGGTCTGGACCCTGTGGGA CCGGACGCGCGGCCCGATCTCGGTGGGGCTCACCGACGCCATGCGCGCGCTCGACCTGAAGCTCGACGGACTGCCCATCC CCGTGGCGGATCAGCTCTTTGAGGTGACGCTGGAGCCGGCCGGCGGCTCACCCACCGGACGCCCCACCGGGCCGATCCTG ATGAAGGGCAATGCCAGCCGCACGCTGTGA
Upstream 100 bases:
>100_bases GGCTCACCCATGGCGAACTGGCGGGACGGCTCGGCCTGCCGCTCGGCACGGTGAAGTCCTGGATCCGCCGTGGCCTTCTG GCGCTGCGGGAGTGCATGGC
Downstream 100 bases:
>100_bases GGGGCCGGACATGAAAAATCCGGCCCGGGGCGAAGCCGCCGGAGCCGGATAAGGAGGTCTGGTGTCCCTGCGGAGCGGGT GCCGTCCGGCCCGAAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-Like Protein; Anti-Sigma K Factor RskA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSPQDRAALAGEYVLGLVDGEEAARCARLAETDPAFAAEVAGWRRRLGSLDATADAVPPSPALWERISASVADTATSQAP GEPEARTADAGSDRVAPFRHGRAWDNLPLWRGIGVTAAAAALALAIGLGAALREAARTPVLVAVLLSDQNRPAAVVNTFR DGRSELVPLEAIRAPEGKALQVWTLWDRTRGPISVGLTDAMRALDLKLDGLPIPVADQLFEVTLEPAGGSPTGRPTGPIL MKGNASRTL
Sequences:
>Translated_249_residues MSPQDRAALAGEYVLGLVDGEEAARCARLAETDPAFAAEVAGWRRRLGSLDATADAVPPSPALWERISASVADTATSQAP GEPEARTADAGSDRVAPFRHGRAWDNLPLWRGIGVTAAAAALALAIGLGAALREAARTPVLVAVLLSDQNRPAAVVNTFR DGRSELVPLEAIRAPEGKALQVWTLWDRTRGPISVGLTDAMRALDLKLDGLPIPVADQLFEVTLEPAGGSPTGRPTGPIL MKGNASRTL >Mature_248_residues SPQDRAALAGEYVLGLVDGEEAARCARLAETDPAFAAEVAGWRRRLGSLDATADAVPPSPALWERISASVADTATSQAPG EPEARTADAGSDRVAPFRHGRAWDNLPLWRGIGVTAAAAALALAIGLGAALREAARTPVLVAVLLSDQNRPAAVVNTFRD GRSELVPLEAIRAPEGKALQVWTLWDRTRGPISVGLTDAMRALDLKLDGLPIPVADQLFEVTLEPAGGSPTGRPTGPILM KGNASRTL
Specific function: Unknown
COG id: COG5343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26032; Mature: 25901
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQDRAALAGEYVLGLVDGEEAARCARLAETDPAFAAEVAGWRRRLGSLDATADAVPPS CCCCHHHHHCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PALWERISASVADTATSQAPGEPEARTADAGSDRVAPFRHGRAWDNLPLWRGIGVTAAAA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ALALAIGLGAALREAARTPVLVAVLLSDQNRPAAVVNTFRDGRSELVPLEAIRAPEGKAL HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCEE QVWTLWDRTRGPISVGLTDAMRALDLKLDGLPIPVADQLFEVTLEPAGGSPTGRPTGPIL EEEEEECCCCCCEEECHHHHHHHHHEEECCCCCCHHHHEEEEEECCCCCCCCCCCCCCEE MKGNASRTL EECCCCCCC >Mature Secondary Structure SPQDRAALAGEYVLGLVDGEEAARCARLAETDPAFAAEVAGWRRRLGSLDATADAVPPS CCCHHHHHCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PALWERISASVADTATSQAPGEPEARTADAGSDRVAPFRHGRAWDNLPLWRGIGVTAAAA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ALALAIGLGAALREAARTPVLVAVLLSDQNRPAAVVNTFRDGRSELVPLEAIRAPEGKAL HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCEE QVWTLWDRTRGPISVGLTDAMRALDLKLDGLPIPVADQLFEVTLEPAGGSPTGRPTGPIL EEEEEECCCCCCEEECHHHHHHHHHEEECCCCCCHHHHEEEEEECCCCCCCCCCCCCCEE MKGNASRTL EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA