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The map label for this gene is ftsY [H]

Identifier: 158425332

GI number: 158425332

Start: 4254322

End: 4255263

Strand: Reverse

Name: ftsY [H]

Synonym: AZC_3708

Alternate gene names: 158425332

Gene position: 4255263-4254322 (Counterclockwise)

Preceding gene: 158425333

Following gene: 158425331

Centisome position: 79.24

GC content: 69.0

Gene sequence:

>942_bases
ATGAGCGAGACCTCTCCCCCCGAAAAACCCGGCTTCTGGCGCCGCCTGACCTCCGGTCTCGCGCGCACGGCCACTTCCCT
CACCCAGGGGATCACGGACCTCGTCACCAAGCGCAAGCTCGATGCCGAGACGCTGGAGGAGCTGGAGGATCTGCTGATCC
GCGCCGACCTCGGCACCGCCACCGCCGCCCGCATCGTCGAGGCGGTGGGCAAGGGCCGGCACGACAAGATGATTGCCCCC
GACGAGGTGAAGGGCCTGATTGCCTCGGAGGTGGAGGAGATCCTTGGCCCCGTCGCGAAGCCCTTCGTGCCGGACGCCGG
CCAGAAGCCTTTCGTGGTGCTGATGGTGGGCGTGAACGGCTCGGGCAAGACAACCACCATCGGCAAGCTCGCCGCCCAGT
GGCGCAGCGAGGGCAAGAGGCTGACGCTCGCCGCGGGCGACACCTTCCGCGCCGCCGCCATCGAGCAGCTCAAGGTGTGG
GGCGCGCGCACGGGCGCCCATGTGGTGGCCCGCGAACAGGGCGCGGATGCCGCCGGCGTTGCTCATGACGCCATCACCGA
AGCCCGCGCAAATGGCTCGGACATCGTGATGATCGACACCGCCGGCCGTCTCCAGAACCGCACCGAGCTCATGGACGAAC
TGGAGAAGGTGGTCCGTGTCGTCAAGAAGCTGGAGCCCACCGCCCCGCACGCCGTGCTGCTGGTGCTGGATGCGACGGTC
GGCCAGAACGCGCTCAATCAGGTGGAGGTGTTCGCCCGCACCGCCGGCGTCACCGGCCTCGTGATGACCAAGCTCGACGG
CACGGCGCGCGGCGGCATCCTTGTCGCCATCGCCCAGAAATATCGCCTGCCCATCCATCTGGTGGGCGTGGGCGAGGGGG
CGGAAGACCTCCAGCCCTTCTCCGCCCGCGACTTCTCCCGCGCCATCGCGGGTCTCGACTGA

Upstream 100 bases:

>100_bases
CCCCCTATTTCACGCCGGTGCGCCTGCACCGGGCGGCGCAGCCCGGCGCCGTGATCGATCTGCGCATCGCCGGGCACGAC
GGCGCGCGTCTGGTGGCCGC

Downstream 100 bases:

>100_bases
GGCGCGGCGATGGGGCGCCGGCCCATGCGGCGCCCCGGCTGTGCATGGCGCCGGGGGCAGGGGACTTCTCCACACCCCCT
CGCTTGACAGGGCCGGGCCC

Product: cell division transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSETSPPEKPGFWRRLTSGLARTATSLTQGITDLVTKRKLDAETLEELEDLLIRADLGTATAARIVEAVGKGRHDKMIAP
DEVKGLIASEVEEILGPVAKPFVPDAGQKPFVVLMVGVNGSGKTTTIGKLAAQWRSEGKRLTLAAGDTFRAAAIEQLKVW
GARTGAHVVAREQGADAAGVAHDAITEARANGSDIVMIDTAGRLQNRTELMDELEKVVRVVKKLEPTAPHAVLLVLDATV
GQNALNQVEVFARTAGVTGLVMTKLDGTARGGILVAIAQKYRLPIHLVGVGEGAEDLQPFSARDFSRAIAGLD

Sequences:

>Translated_313_residues
MSETSPPEKPGFWRRLTSGLARTATSLTQGITDLVTKRKLDAETLEELEDLLIRADLGTATAARIVEAVGKGRHDKMIAP
DEVKGLIASEVEEILGPVAKPFVPDAGQKPFVVLMVGVNGSGKTTTIGKLAAQWRSEGKRLTLAAGDTFRAAAIEQLKVW
GARTGAHVVAREQGADAAGVAHDAITEARANGSDIVMIDTAGRLQNRTELMDELEKVVRVVKKLEPTAPHAVLLVLDATV
GQNALNQVEVFARTAGVTGLVMTKLDGTARGGILVAIAQKYRLPIHLVGVGEGAEDLQPFSARDFSRAIAGLD
>Mature_312_residues
SETSPPEKPGFWRRLTSGLARTATSLTQGITDLVTKRKLDAETLEELEDLLIRADLGTATAARIVEAVGKGRHDKMIAPD
EVKGLIASEVEEILGPVAKPFVPDAGQKPFVVLMVGVNGSGKTTTIGKLAAQWRSEGKRLTLAAGDTFRAAAIEQLKVWG
ARTGAHVVAREQGADAAGVAHDAITEARANGSDIVMIDTAGRLQNRTELMDELEKVVRVVKKLEPTAPHAVLLVLDATVG
QNALNQVEVFARTAGVTGLVMTKLDGTARGGILVAIAQKYRLPIHLVGVGEGAEDLQPFSARDFSRAIAGLD

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=304, Percent_Identity=26.9736842105263, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI226371618, Length=226, Percent_Identity=29.2035398230088, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI295424842, Length=295, Percent_Identity=31.5254237288136, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI23308697, Length=295, Percent_Identity=31.5254237288136, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=27.007299270073, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1789874, Length=309, Percent_Identity=48.5436893203884, Blast_Score=279, Evalue=1e-76,
Organism=Escherichia coli, GI1788963, Length=208, Percent_Identity=36.5384615384615, Blast_Score=130, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17539958, Length=230, Percent_Identity=29.1304347826087, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI193206261, Length=303, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=232, Percent_Identity=33.6206896551724, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=223, Percent_Identity=30.4932735426009, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17647949, Length=230, Percent_Identity=30.4347826086957, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24641198, Length=296, Percent_Identity=29.7297297297297, Blast_Score=109, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33147; Mature: 33016

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETSPPEKPGFWRRLTSGLARTATSLTQGITDLVTKRKLDAETLEELEDLLIRADLGTA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
TAARIVEAVGKGRHDKMIAPDEVKGLIASEVEEILGPVAKPFVPDAGQKPFVVLMVGVNG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC
SGKTTTIGKLAAQWRSEGKRLTLAAGDTFRAAAIEQLKVWGARTGAHVVAREQGADAAGV
CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
AHDAITEARANGSDIVMIDTAGRLQNRTELMDELEKVVRVVKKLEPTAPHAVLLVLDATV
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHH
GQNALNQVEVFARTAGVTGLVMTKLDGTARGGILVAIAQKYRLPIHLVGVGEGAEDLQPF
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEHHHCCCEEEEECCCCHHHCCCC
SARDFSRAIAGLD
CHHHHHHHHHCCC
>Mature Secondary Structure 
SETSPPEKPGFWRRLTSGLARTATSLTQGITDLVTKRKLDAETLEELEDLLIRADLGTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
TAARIVEAVGKGRHDKMIAPDEVKGLIASEVEEILGPVAKPFVPDAGQKPFVVLMVGVNG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC
SGKTTTIGKLAAQWRSEGKRLTLAAGDTFRAAAIEQLKVWGARTGAHVVAREQGADAAGV
CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
AHDAITEARANGSDIVMIDTAGRLQNRTELMDELEKVVRVVKKLEPTAPHAVLLVLDATV
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHH
GQNALNQVEVFARTAGVTGLVMTKLDGTARGGILVAIAQKYRLPIHLVGVGEGAEDLQPF
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEHHHCCCEEEEECCCCHHHCCCC
SARDFSRAIAGLD
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]