Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158425325

Identifier: 158425325

GI number: 158425325

Start: 4246479

End: 4247144

Strand: Direct

Name: 158425325

Synonym: AZC_3701

Alternate gene names: NA

Gene position: 4246479-4247144 (Clockwise)

Preceding gene: 158425324

Following gene: 158425326

Centisome position: 79.08

GC content: 68.62

Gene sequence:

>666_bases
ATGGACAATCCGGCCCGGCACGTCGTCACCATCGCGGGAGTGAAGGTCCTGTTCGTGATGGCCACGACCTTCGAGTACGG
GCCGCACCTGTCCGCGCGCATCATGCCCCTCATCAGCGGCGTCGGGCCGGTGGAGGCGGCTGCCGGCACAGGCATCGCCC
TCGCCCGCCTCGCCGCAAAGGACGACCTGCCGGATCTCGTCTTCACCCTCGGCTCGGCCGGCTCGCGCAGCCTCGACCAT
GCGGGCATCTATCAGGTGGCGAGTGTCGCCTATCGCGACATGGACGCCTCCCCGCTCGGCTTCGAGAAGGGGCGCACGCC
CTTCCTCGACCTTCCGGCCGTCCTTCCGGTGGAGCCGCAGATCCCCGGCCTGCCCGCCGCCTCGCTCTCCACCGGCGGCG
CCATCATTTCCGGCGCGGCCTATGACGCCATCGACGCAGATATGGTGGACATGGAAACCTATGCGGTGCTGCGGGCGGCG
GCGCAGTTCGGCGTGCCCACCATCGGCCTGCGCGGCATCAGCGACGGAAAATCCGAGCTCGCCCGGCTTGAGGATTGGAC
GGAATACCTGCACATCATCGACGAGAAGCTCGGCGCCGCGCTCGACCATTTCACCGAACAGCTGCGCGCCGGCACCCTGA
CCCTCCCGAACCGGATTCCCGCGTGA

Upstream 100 bases:

>100_bases
GGGCATGTGTCCCTGCCTGCCCCCGGCCATGAAGCGGCCGGAAGCGGCCATTGACACGCGCGCCGTGCCGGAGGACCACA
GGCGGCAAAGGAGCATGCCT

Downstream 100 bases:

>100_bases
CCCCTTCCGCCCGCCTGTCCGCCGCCATCGACATCCTCGCCGATATCATCGCCCGCCGCCGCCCGGCCGGCGATGCCATC
AAGGACTGGGGGCTCTCGCA

Product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase

Products: 5-methylthio-D-ribose; adenine

Alternate protein names: Nucleosidase; Nucleoside Phosphorylase; MTA/SAH Nucleosidase; Nucleoside Phosphorylase-Like Protein; Phosphorylase; 5-Methylthioadenosine/S-Adenosylhomocysteinenucl Eosidase

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDNPARHVVTIAGVKVLFVMATTFEYGPHLSARIMPLISGVGPVEAAAGTGIALARLAAKDDLPDLVFTLGSAGSRSLDH
AGIYQVASVAYRDMDASPLGFEKGRTPFLDLPAVLPVEPQIPGLPAASLSTGGAIISGAAYDAIDADMVDMETYAVLRAA
AQFGVPTIGLRGISDGKSELARLEDWTEYLHIIDEKLGAALDHFTEQLRAGTLTLPNRIPA

Sequences:

>Translated_221_residues
MDNPARHVVTIAGVKVLFVMATTFEYGPHLSARIMPLISGVGPVEAAAGTGIALARLAAKDDLPDLVFTLGSAGSRSLDH
AGIYQVASVAYRDMDASPLGFEKGRTPFLDLPAVLPVEPQIPGLPAASLSTGGAIISGAAYDAIDADMVDMETYAVLRAA
AQFGVPTIGLRGISDGKSELARLEDWTEYLHIIDEKLGAALDHFTEQLRAGTLTLPNRIPA
>Mature_221_residues
MDNPARHVVTIAGVKVLFVMATTFEYGPHLSARIMPLISGVGPVEAAAGTGIALARLAAKDDLPDLVFTLGSAGSRSLDH
AGIYQVASVAYRDMDASPLGFEKGRTPFLDLPAVLPVEPQIPGLPAASLSTGGAIISGAAYDAIDADMVDMETYAVLRAA
AQFGVPTIGLRGISDGKSELARLEDWTEYLHIIDEKLGAALDHFTEQLRAGTLTLPNRIPA

Specific function: Unknown

COG id: COG0775

COG function: function code F; Nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.2.16; 3.2.2.9

Molecular weight: Translated: 23179; Mature: 23179

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNPARHVVTIAGVKVLFVMATTFEYGPHLSARIMPLISGVGPVEAAAGTGIALARLAAK
CCCCHHHEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHC
DDLPDLVFTLGSAGSRSLDHAGIYQVASVAYRDMDASPLGFEKGRTPFLDLPAVLPVEPQ
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IPGLPAASLSTGGAIISGAAYDAIDADMVDMETYAVLRAAAQFGVPTIGLRGISDGKSEL
CCCCCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
ARLEDWTEYLHIIDEKLGAALDHFTEQLRAGTLTLPNRIPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure
MDNPARHVVTIAGVKVLFVMATTFEYGPHLSARIMPLISGVGPVEAAAGTGIALARLAAK
CCCCHHHEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHC
DDLPDLVFTLGSAGSRSLDHAGIYQVASVAYRDMDASPLGFEKGRTPFLDLPAVLPVEPQ
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IPGLPAASLSTGGAIISGAAYDAIDADMVDMETYAVLRAAAQFGVPTIGLRGISDGKSEL
CCCCCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
ARLEDWTEYLHIIDEKLGAALDHFTEQLRAGTLTLPNRIPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: methylthioadenosine; H2O

Specific reaction: methylthioadenosine + H2O = 5-methylthio-D-ribose + adenine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA