Click here to switch to the map view.

The map label for this gene is potI [H]

Identifier: 158425141

GI number: 158425141

Start: 4037732

End: 4038547

Strand: Reverse

Name: potI [H]

Synonym: AZC_3517

Alternate gene names: 158425141

Gene position: 4038547-4037732 (Counterclockwise)

Preceding gene: 158425142

Following gene: 158425140

Centisome position: 75.21

GC content: 65.81

Gene sequence:

>816_bases
ATGAGCGGACGCCTCTCCTGGTTCAATGTCACCGCGCTGGTGCTGGGGTTTGCCTTCCTCTACATCCCCATCCTGCTGCT
GGTGCTCTATTCCTTCAACGCCTCGCGTCTCGTCACCGTGTGGGCCGGCTTCTCCACCCAGTGGTATGCCTCGCTGCTGG
AGAACGACCAGCTTCTCGACGCCTTCTGGGTGACGCTGCGGGTCGCCTTCCTGTCCTCGCTGGCGGCCACCGTGCTCGGC
ACCATGGCGGCCCTCGCGCTCACCCGCTACGGGCGCTTCTTCGGCCGCACCCTCTTCTCCGGCATGACCTATGCCCCGCT
GGTGATGCCGGAAGTCATCACCGGTCTGTCGCTGCTGCTGCTGTTCGTGGCGGTGGGGATGGAGCGCGGTTTCTGGACCA
TCACGCTCGCCCACATCACCTTCACCATGTGCTTCGTGGCGGTGGTGGTGCAGTCGCGCCTCGTGACGTTCGACCGTGCG
CTGGAGGAAGCGGCGCAGGACCTCGGCTGCCCGCCGGTGAAAACCTTCTTCGTGGTCACGCTGCCGCTCATCCTGCCGGC
GGTGGTGTCCGGCTTCATGCTGGCCTTCACCCTGTCCATGGATGACCTCGTCATCGCCAGCTTCACCACCGGCCCCGGCG
CCACCACGCTGCCCATGCGCATCTATTCGCAGGTGCGCCTCGGCGTGACGCCGGAGATCAATGCCATCTGCACCATCCTC
ATCGGCATCATCGCCGTCGTGGTGCTGGCGGCCTCCATCCTAACCAAGCGGCAGGAGGCGCAGCGGCGCATGGAGGAGCA
GGCCGCCCTTCGGTAA

Upstream 100 bases:

>100_bases
GGACCGCCTCCTCGGCGGTGGCGGTGCTGCTGCTGGTGGTGCTCGTGGTGCCGATCGTCATCTATCAGAACATCCAGGCG
CGCCAGCTGGAGGCGGGACG

Downstream 100 bases:

>100_bases
AGGTTCGGCCTGCGGGGCGCCGACCCCGCCGTGTCCTGTGCCCGTGTGCACACGCCGGCGGCGCAAAATGCGGCGCGCGG
CGCGGCCGCCCCCGAAAGTG

Product: spermidine/putrescine ABC transporter permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSGRLSWFNVTALVLGFAFLYIPILLLVLYSFNASRLVTVWAGFSTQWYASLLENDQLLDAFWVTLRVAFLSSLAATVLG
TMAALALTRYGRFFGRTLFSGMTYAPLVMPEVITGLSLLLLFVAVGMERGFWTITLAHITFTMCFVAVVVQSRLVTFDRA
LEEAAQDLGCPPVKTFFVVTLPLILPAVVSGFMLAFTLSMDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAICTIL
IGIIAVVVLAASILTKRQEAQRRMEEQAALR

Sequences:

>Translated_271_residues
MSGRLSWFNVTALVLGFAFLYIPILLLVLYSFNASRLVTVWAGFSTQWYASLLENDQLLDAFWVTLRVAFLSSLAATVLG
TMAALALTRYGRFFGRTLFSGMTYAPLVMPEVITGLSLLLLFVAVGMERGFWTITLAHITFTMCFVAVVVQSRLVTFDRA
LEEAAQDLGCPPVKTFFVVTLPLILPAVVSGFMLAFTLSMDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAICTIL
IGIIAVVVLAASILTKRQEAQRRMEEQAALR
>Mature_270_residues
SGRLSWFNVTALVLGFAFLYIPILLLVLYSFNASRLVTVWAGFSTQWYASLLENDQLLDAFWVTLRVAFLSSLAATVLGT
MAALALTRYGRFFGRTLFSGMTYAPLVMPEVITGLSLLLLFVAVGMERGFWTITLAHITFTMCFVAVVVQSRLVTFDRAL
EEAAQDLGCPPVKTFFVVTLPLILPAVVSGFMLAFTLSMDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAICTILI
GIIAVVVLAASILTKRQEAQRRMEEQAALR

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787081, Length=270, Percent_Identity=54.8148148148148, Blast_Score=270, Evalue=6e-74,
Organism=Escherichia coli, GI1787368, Length=231, Percent_Identity=45.021645021645, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1787714, Length=247, Percent_Identity=34.8178137651822, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1788764, Length=176, Percent_Identity=34.6590909090909, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29727; Mature: 29596

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRLSWFNVTALVLGFAFLYIPILLLVLYSFNASRLVTVWAGFSTQWYASLLENDQLLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCHHHH
AFWVTLRVAFLSSLAATVLGTMAALALTRYGRFFGRTLFSGMTYAPLVMPEVITGLSLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LFVAVGMERGFWTITLAHITFTMCFVAVVVQSRLVTFDRALEEAAQDLGCPPVKTFFVVT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LPLILPAVVSGFMLAFTLSMDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAICTIL
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
IGIIAVVVLAASILTKRQEAQRRMEEQAALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGRLSWFNVTALVLGFAFLYIPILLLVLYSFNASRLVTVWAGFSTQWYASLLENDQLLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCHHHH
AFWVTLRVAFLSSLAATVLGTMAALALTRYGRFFGRTLFSGMTYAPLVMPEVITGLSLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LFVAVGMERGFWTITLAHITFTMCFVAVVVQSRLVTFDRALEEAAQDLGCPPVKTFFVVT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LPLILPAVVSGFMLAFTLSMDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAICTIL
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
IGIIAVVVLAASILTKRQEAQRRMEEQAALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]