| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is hyi [H]
Identifier: 158425113
GI number: 158425113
Start: 4006358
End: 4007137
Strand: Direct
Name: hyi [H]
Synonym: AZC_3489
Alternate gene names: 158425113
Gene position: 4006358-4007137 (Clockwise)
Preceding gene: 158425112
Following gene: 158425114
Centisome position: 74.61
GC content: 64.1
Gene sequence:
>780_bases ATGCCCAAGTTTGCTGCCAATCTGACCATGCTCTGGAACGAGATCGACTTCCTGGACCGCTTCGCCAAGGCGGCGGAGGC CGGTTTCAAGGGCGTGGAGTATCTCTTCCCCTACGCCTATCCCAAGGAGGAGCTGGCCGAGCGCCTTGAGAAGCACGGGC TCACCCAGGCGCTGCACAATCTGCCGGCCGGCGAGTGGGCGAAGGGCGAACGCGGCATCGCCGTCCTGCCCGACCGCGTC GGCGAGTTCCAGGACAGCGTCGGCACCGCACTCGAATATGCCAAGGTGCTGAAGACGCAGACGCTGAACGTGCTGGCGGG CATCGCCCCCAAGGACGTGCCGGCGGAGAAGATCTACGAGACGCTGGTCTCGAACCTGAAATTCGCCGCCGCCGAGGCCA AGAAGGCGGGCATCCCGCTGGTGGTCGAGGCCATCAACACCCGCGACATTCCCGGCTTCTATCTCAACACCACCAAGCAG ACGCTCAGCTTGCTGGATGACGTGGGGCCGCAGGACGTCTTCTTCCAGTACGACATCTACCACATGCAGATCATGGAGGG CGATCTCGTCCCCACACTGCGCGCCAACATGGCCCGCATCAAGCACATCCAGCTCGCGGACAATCCGGGCCGCGGCGAGC CGGGCACGGGCGAGATCAACTACCCGTTCATCTTCAAGGCCATCGACGATGCCGGTTACACCGGCTGGATCGGTGCCGAA TACAAGCCCGCGACGACCACCGACGCCGGCATCGGCTGGTTCGCCCCCTACAAGGGCTGA
Upstream 100 bases:
>100_bases CCGCCCGTCCGCCCTATCCCTTTCACACGGAACGTTTTACGGCTTGGATTGCCAAACAATCGAAGCCTGACTTGCCCAGG CTCAGCCAGCGGAGAGGTGA
Downstream 100 bases:
>100_bases GCTGCCAGAACCATTCCGCCAAGGACACCGCCCGCCGCCCGGCCTGCCGGGCGTGCGCGGCGCACATGCACGGGAGCACG CACAATGAACGTGGGTTTCA
Product: hydroxypyruvate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPKFAANLTMLWNEIDFLDRFAKAAEAGFKGVEYLFPYAYPKEELAERLEKHGLTQALHNLPAGEWAKGERGIAVLPDRV GEFQDSVGTALEYAKVLKTQTLNVLAGIAPKDVPAEKIYETLVSNLKFAAAEAKKAGIPLVVEAINTRDIPGFYLNTTKQ TLSLLDDVGPQDVFFQYDIYHMQIMEGDLVPTLRANMARIKHIQLADNPGRGEPGTGEINYPFIFKAIDDAGYTGWIGAE YKPATTTDAGIGWFAPYKG
Sequences:
>Translated_259_residues MPKFAANLTMLWNEIDFLDRFAKAAEAGFKGVEYLFPYAYPKEELAERLEKHGLTQALHNLPAGEWAKGERGIAVLPDRV GEFQDSVGTALEYAKVLKTQTLNVLAGIAPKDVPAEKIYETLVSNLKFAAAEAKKAGIPLVVEAINTRDIPGFYLNTTKQ TLSLLDDVGPQDVFFQYDIYHMQIMEGDLVPTLRANMARIKHIQLADNPGRGEPGTGEINYPFIFKAIDDAGYTGWIGAE YKPATTTDAGIGWFAPYKG >Mature_258_residues PKFAANLTMLWNEIDFLDRFAKAAEAGFKGVEYLFPYAYPKEELAERLEKHGLTQALHNLPAGEWAKGERGIAVLPDRVG EFQDSVGTALEYAKVLKTQTLNVLAGIAPKDVPAEKIYETLVSNLKFAAAEAKKAGIPLVVEAINTRDIPGFYLNTTKQT LSLLDDVGPQDVFFQYDIYHMQIMEGDLVPTLRANMARIKHIQLADNPGRGEPGTGEINYPFIFKAIDDAGYTGWIGAEY KPATTTDAGIGWFAPYKG
Specific function: Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) [H]
COG id: COG3622
COG function: function code G; Hydroxypyruvate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hyi family [H]
Homologues:
Organism=Homo sapiens, GI300068962, Length=263, Percent_Identity=36.1216730038023, Blast_Score=162, Evalue=3e-40, Organism=Homo sapiens, GI300068964, Length=244, Percent_Identity=36.0655737704918, Blast_Score=146, Evalue=2e-35, Organism=Escherichia coli, GI1786718, Length=258, Percent_Identity=53.4883720930233, Blast_Score=296, Evalue=1e-81, Organism=Escherichia coli, GI1789095, Length=258, Percent_Identity=39.1472868217054, Blast_Score=212, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17552022, Length=240, Percent_Identity=37.9166666666667, Blast_Score=159, Evalue=1e-39, Organism=Drosophila melanogaster, GI17530883, Length=257, Percent_Identity=32.295719844358, Blast_Score=137, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017643 - InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =5.3.1.22 [H]
Molecular weight: Translated: 28576; Mature: 28445
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKFAANLTMLWNEIDFLDRFAKAAEAGFKGVEYLFPYAYPKEELAERLEKHGLTQALHN CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHH LPAGEWAKGERGIAVLPDRVGEFQDSVGTALEYAKVLKTQTLNVLAGIAPKDVPAEKIYE CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH TLVSNLKFAAAEAKKAGIPLVVEAINTRDIPGFYLNTTKQTLSLLDDVGPQDVFFQYDIY HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCHHHHHHHHHCCCCCCEEEEEEEE HMQIMEGDLVPTLRANMARIKHIQLADNPGRGEPGTGEINYPFIFKAIDDAGYTGWIGAE EEEEECCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC YKPATTTDAGIGWFAPYKG CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKFAANLTMLWNEIDFLDRFAKAAEAGFKGVEYLFPYAYPKEELAERLEKHGLTQALHN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHH LPAGEWAKGERGIAVLPDRVGEFQDSVGTALEYAKVLKTQTLNVLAGIAPKDVPAEKIYE CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH TLVSNLKFAAAEAKKAGIPLVVEAINTRDIPGFYLNTTKQTLSLLDDVGPQDVFFQYDIY HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCHHHHHHHHHCCCCCCEEEEEEEE HMQIMEGDLVPTLRANMARIKHIQLADNPGRGEPGTGEINYPFIFKAIDDAGYTGWIGAE EEEEECCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC YKPATTTDAGIGWFAPYKG CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8440684; 10561547; 9278503 [H]