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The map label for this gene is gntR [C]

Identifier: 158425015

GI number: 158425015

Start: 3922432

End: 3923214

Strand: Reverse

Name: gntR [C]

Synonym: AZC_3391

Alternate gene names: 158425015

Gene position: 3923214-3922432 (Counterclockwise)

Preceding gene: 158425025

Following gene: 158425014

Centisome position: 73.06

GC content: 69.09

Gene sequence:

>783_bases
GTGGTGCAGGACGACAGTTTGGACGTGGCGGATCACGGCCCGATGACAGGCGAGCGGGACGGCGATCTGCGCCGCGGCAG
CGGCGTGGCGCTCTGGAAGCAGATCGCCGAGACGCTGGAGGCGGAGATCGTCTCGGGTGCGCGCCCTGCGGGCGCCCGCC
TGCCGGTCGAGGCGGAACTGGCGGAACGGTTCGGCGTCAACCGTCACACGGTGCGCCGGGCGCTCGGCGTCCTCACGGAA
CGGGGCCTCGTGGAAGCGACGCCCGGCCGCGGTACCTTCGTGAAGGAGCCGCCGCTGCGCTATCCCATCGGTCCGCGCAC
CCGCTTTTCGGAAATCGTGCTGGCCAACGGCCGCGAGCCGCATGGCCGTTTCCTTGGCTCGCAGGTGGAGGCGGCGACGC
CGGACGTGGCGCGGGAACTGGGCCTCTCGGTCGGCGACAGGGTGCTGCGCATCGACACCATGCATGAGGCGGACGGCGTG
CCCATGTCCTGCGGCTCGTCCTGGTTCGTCCATTCCCGCTGTCAGGACCTCGACCTCATCTATGCGGCAACGGGCTCGCT
AACCCGTGCGCTCTCCACCCTCGGCATCGTCGATTATCGCCGCAAGGAAACCCGCATCGGCGCGCGCATCGCCGACGAAC
GCGAGCGCATGCTTCTCGCGATCCCCGCCGGGCGCTCCGTCATGGTTCTGGAACGGGTGGATGTGGACATTGCCGGCGTG
CCATTACAGTGGGGCCGTTCGAGCTTCGTCGCCGACCGGGTCCAGTTGATCATCAAGCCCTGA

Upstream 100 bases:

>100_bases
GGCGTGTGCCCATCCCGCCGAAGCATCTGGACGGGATTTGTATAAAAGTCTATACAAATAGGCAAGCGCGAGCGGCGGAA
AAATCGAAGGGGGGCCACCG

Downstream 100 bases:

>100_bases
ACCGCCGCCCGCCCTATCCCGCCCCAGAGGATCGTCATGAGCCGTATCGAGACCGTCGAGCAACTGCGCAGCCACTACAA
GGCGGTCTCGCCCCGCGCCG

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MVQDDSLDVADHGPMTGERDGDLRRGSGVALWKQIAETLEAEIVSGARPAGARLPVEAELAERFGVNRHTVRRALGVLTE
RGLVEATPGRGTFVKEPPLRYPIGPRTRFSEIVLANGREPHGRFLGSQVEAATPDVARELGLSVGDRVLRIDTMHEADGV
PMSCGSSWFVHSRCQDLDLIYAATGSLTRALSTLGIVDYRRKETRIGARIADERERMLLAIPAGRSVMVLERVDVDIAGV
PLQWGRSSFVADRVQLIIKP

Sequences:

>Translated_260_residues
MVQDDSLDVADHGPMTGERDGDLRRGSGVALWKQIAETLEAEIVSGARPAGARLPVEAELAERFGVNRHTVRRALGVLTE
RGLVEATPGRGTFVKEPPLRYPIGPRTRFSEIVLANGREPHGRFLGSQVEAATPDVARELGLSVGDRVLRIDTMHEADGV
PMSCGSSWFVHSRCQDLDLIYAATGSLTRALSTLGIVDYRRKETRIGARIADERERMLLAIPAGRSVMVLERVDVDIAGV
PLQWGRSSFVADRVQLIIKP
>Mature_260_residues
MVQDDSLDVADHGPMTGERDGDLRRGSGVALWKQIAETLEAEIVSGARPAGARLPVEAELAERFGVNRHTVRRALGVLTE
RGLVEATPGRGTFVKEPPLRYPIGPRTRFSEIVLANGREPHGRFLGSQVEAATPDVARELGLSVGDRVLRIDTMHEADGV
PMSCGSSWFVHSRCQDLDLIYAATGSLTRALSTLGIVDYRRKETRIGARIADERERMLLAIPAGRSVMVLERVDVDIAGV
PLQWGRSSFVADRVQLIIKP

Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. By Similarity Could Be A Transcriptional Regulator. [C]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790540, Length=233, Percent_Identity=32.1888412017167, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788418, Length=241, Percent_Identity=24.0663900414938, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786950, Length=230, Percent_Identity=26.9565217391304, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082252, Length=167, Percent_Identity=26.9461077844311, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012702
- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 28409; Mature: 28409

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQDDSLDVADHGPMTGERDGDLRRGSGVALWKQIAETLEAEIVSGARPAGARLPVEAEL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
AERFGVNRHTVRRALGVLTERGLVEATPGRGTFVKEPPLRYPIGPRTRFSEIVLANGREP
HHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
HGRFLGSQVEAATPDVARELGLSVGDRVLRIDTMHEADGVPMSCGSSWFVHSRCQDLDLI
HHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECHHCCCCCCCCCCCCCEECCCCCCCEEE
YAATGSLTRALSTLGIVDYRRKETRIGARIADERERMLLAIPAGRSVMVLERVDVDIAGV
EECHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCEEEEEEECCCEEECC
PLQWGRSSFVADRVQLIIKP
CHHCCCHHHHHHHHEEEECC
>Mature Secondary Structure
MVQDDSLDVADHGPMTGERDGDLRRGSGVALWKQIAETLEAEIVSGARPAGARLPVEAEL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
AERFGVNRHTVRRALGVLTERGLVEATPGRGTFVKEPPLRYPIGPRTRFSEIVLANGREP
HHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
HGRFLGSQVEAATPDVARELGLSVGDRVLRIDTMHEADGVPMSCGSSWFVHSRCQDLDLI
HHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECHHCCCCCCCCCCCCCEECCCCCCCEEE
YAATGSLTRALSTLGIVDYRRKETRIGARIADERERMLLAIPAGRSVMVLERVDVDIAGV
EECHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCEEEEEEECCCEEECC
PLQWGRSSFVADRVQLIIKP
CHHCCCHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481431; 9889346 [H]