| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425014
Identifier: 158425014
GI number: 158425014
Start: 3921787
End: 3922395
Strand: Reverse
Name: 158425014
Synonym: AZC_3390
Alternate gene names: NA
Gene position: 3922395-3921787 (Counterclockwise)
Preceding gene: 158425015
Following gene: 158425013
Centisome position: 73.05
GC content: 66.34
Gene sequence:
>609_bases ATGAGCCGTATCGAGACCGTCGAGCAACTGCGCAGCCACTACAAGGCGGTCTCGCCCCGCGCCGCCCAGAAGGTGTTGTC GAAGCTTGATGCGCACTGCCGCCGCTTCATCGGCCTCAGCCCCTTCGTCATGCTTGCCACATCGAGCCGCGACGGTGCCC TCGACGTGACGCCGCGCGGCGACCTGCCCGGCTTCGTACAGGTGGAGGACGAGACCACGCTCATCCTGCCTGACCGGCCG GGCAACAACCGCCTCGACAGCCTCACCAACATTCTCGAAAACCCCGGCATCGGCCTCATCTTTCTCATCCCCGGCGTGGA CGAGACGCTGCGCATCAACGGCACGGCGGAGATCCGGGTGGACGAGGATCTGCGTCGCGCCAGCGCGGTGGAGGGCAAGC TGCCGACCTCGGTCCTGCGCATCAGCGTGCGCGAGGCCTATCTGCACTGCGCCAAGGCCTTCATGCGCTCGCGCCTGTGG GACCCGGAGGCGCAGGTGGAGCGCTCCGTGCTTCCGACCCTTGGCCAGATGCTGAAGGACCAGATCGGTCTTGCGGAAGC CGAGAGCCAGGAAGCCATGCTCGCCCGCTTCCAGCATGCCATGTATTGA
Upstream 100 bases:
>100_bases GCCATTACAGTGGGGCCGTTCGAGCTTCGTCGCCGACCGGGTCCAGTTGATCATCAAGCCCTGAACCGCCGCCCGCCCTA TCCCGCCCCAGAGGATCGTC
Downstream 100 bases:
>100_bases GCCGTCTGCGACGACGGGCTGTCGGTGAGCGGGCGAAACCGGACAATGCTGTCGGGCGTCCCCGCTCCCGGCCAGTACGG ATGCTGATAAGCGGATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphohydrolase; Pyridoxamine 5-Phosphate Oxidase; Hydrolase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; NTP Pyrophosphohydrolase; Pyridoxine Biosynthesis Protein; Phenylacetate-CoA Oxygenase/Reductase PaaK Subunit; Transcriptional Regulator AraC Family; Pyridoxamine 5-Phosphate Oxidase Family; Fmn Flavoprotein; Pyridoxamine 5\-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Related
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSRIETVEQLRSHYKAVSPRAAQKVLSKLDAHCRRFIGLSPFVMLATSSRDGALDVTPRGDLPGFVQVEDETTLILPDRP GNNRLDSLTNILENPGIGLIFLIPGVDETLRINGTAEIRVDEDLRRASAVEGKLPTSVLRISVREAYLHCAKAFMRSRLW DPEAQVERSVLPTLGQMLKDQIGLAEAESQEAMLARFQHAMY
Sequences:
>Translated_202_residues MSRIETVEQLRSHYKAVSPRAAQKVLSKLDAHCRRFIGLSPFVMLATSSRDGALDVTPRGDLPGFVQVEDETTLILPDRP GNNRLDSLTNILENPGIGLIFLIPGVDETLRINGTAEIRVDEDLRRASAVEGKLPTSVLRISVREAYLHCAKAFMRSRLW DPEAQVERSVLPTLGQMLKDQIGLAEAESQEAMLARFQHAMY >Mature_201_residues SRIETVEQLRSHYKAVSPRAAQKVLSKLDAHCRRFIGLSPFVMLATSSRDGALDVTPRGDLPGFVQVEDETTLILPDRPG NNRLDSLTNILENPGIGLIFLIPGVDETLRINGTAEIRVDEDLRRASAVEGKLPTSVLRISVREAYLHCAKAFMRSRLWD PEAQVERSVLPTLGQMLKDQIGLAEAESQEAMLARFQHAMY
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22493; Mature: 22362
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIETVEQLRSHYKAVSPRAAQKVLSKLDAHCRRFIGLSPFVMLATSSRDGALDVTPRG CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCC DLPGFVQVEDETTLILPDRPGNNRLDSLTNILENPGIGLIFLIPGVDETLRINGTAEIRV CCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEECCEEEEEE DEDLRRASAVEGKLPTSVLRISVREAYLHCAKAFMRSRLWDPEAQVERSVLPTLGQMLKD CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QIGLAEAESQEAMLARFQHAMY HHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SRIETVEQLRSHYKAVSPRAAQKVLSKLDAHCRRFIGLSPFVMLATSSRDGALDVTPRG CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCC DLPGFVQVEDETTLILPDRPGNNRLDSLTNILENPGIGLIFLIPGVDETLRINGTAEIRV CCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEECCEEEEEE DEDLRRASAVEGKLPTSVLRISVREAYLHCAKAFMRSRLWDPEAQVERSVLPTLGQMLKD CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QIGLAEAESQEAMLARFQHAMY HHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA