| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424921
Identifier: 158424921
GI number: 158424921
Start: 3808402
End: 3809772
Strand: Direct
Name: 158424921
Synonym: AZC_3297
Alternate gene names: NA
Gene position: 3808402-3809772 (Clockwise)
Preceding gene: 158424919
Following gene: 158424922
Centisome position: 70.92
GC content: 66.96
Gene sequence:
>1371_bases ATGACGTCCAACAGTTCCTTCTTCGGCGATCTCCTCAACTCCATCGCGGACCGCGGCCGCGCGCTGCTCGACCGGTCGGG CCGCAGCACCGGCGCCACGCGGGCGGCGACCCTGGTGGAGCGCTGCCAGGAACTGCTGTCGGGCAAGGGCGAGGCGTCCG GCGTCGCGCTGGCCGCCGAAGTCCTCTCCCGCTACGGACAGATGAAGACCGGCGAGCGCATCGCCTTCTTCGAAAGCCTG CTGGAAGTCTTCGGCCCGGACAAGGAGCGGCTGGAAAAGGCCATCGCCGCTTATTCCGCGAAGCCCGGCGAAGCCGCCAT CGCGGAACTGCATGCCGCCAGCGAGCCGCGCCGACAGGAGTTGTTCCGCCGCTTCAACATGGCCCCCGGCGCCACCGCCG AACTGGTGCGCATGCGCGAGCATCTCATGGACGCCCTGCCCCGGCGCAAGGACCTGACGCCGGTGGACAGCGATTTCACG CACCTCTTCTCCTCCTGGTTCAATCGGGGGTTCCTCGTGCTGCGCCGGATCGACTGGTCCACGCCCGCCAATGTGCTGGA GAAGATCATCCGCTATGAGGCGGTTCACGCCATCCGCGACTGGAACGACCTGCGCGCCCGCGTCGACAGCCCGGACCGGC ACTGCTACGCCTTCTTCCATCCCGCGCTGGTGGACGAGCCGCTGATCTTCGTCGAGGTGGCGCTGATGCGCGAGACGCCC GGCGCCATCGCCCCCATCCTCGACCAGTCTCGCGAACCCATCGCGCCCGGAACCGCCACGACGGCGGTCTTCTATTCCAT CTCCAACTGCCAGCGCGGCCTCGGCGGGGTCAGCTTCGGCAATTTCCTCATCAAGCAGGTGGTGGAGGAGATCTCCCGCG AGATCCCCTCGCTCACCACCTTTGTCACGCTCTCGCCCGTGCCCGGCTTCCGCAAATGGCTGGATGCCGAGAGGCGTAAC GCGGACTCCACGGTCCTGACGGCCGCCGACCGTGAACTGCTCGCCCTGACCGACAGCGCGGAATGGACGGAGCAGGATGC AGTGCGCGCGGAACTGTCCTCGCTGATGAGCGCGCTCTCGGCGCATTATTTCCTGCAGGCCAAGACACCGAAGGGGCGCC CGATCGACCCGGTCGCGCGCTTCCATCTCGGCAACGGCGCTCGCCTCGAGCGCATCAACCCCATGGGCGACCTGTCGGAA AAGGGCATCGCCCAGGCCTATGGGACCATGGTCAACTACCGCTATGTGCTCGCGGACATCGAAAAGAACCACGAGGCCTT CGCCGCCAAGGGCGAAGTGGTGGCGAGCACAGTGGTGAAGAAACTCCTGCGGGGCGAAAACGCGCCGCGCGCTCTGGTGC CGACCCAATGA
Upstream 100 bases:
>100_bases TGCTACAGTGGATGCGAGGCTGAACGGTGCGCGCGGCGGTTTCCTCGATCTCCGTCCGGCGCGGTCGCCGTCCCGGCCCG CAACCGAGAGGACCGGCGTG
Downstream 100 bases:
>100_bases CCTCTCAGAACCATTTCTTTGCCGCCATCCGCGCGGCCATGCCCGATCTGTCGAAGCCGCTCGCCACCCATCCGGATGGC GCGATGGAGACCTATGGCGA
Product: malonyl-CoA decarboxylase
Products: NA
Alternate protein names: Malonyl-CoA Decarboxylase Superfamily; Malonyl-CoA Decarboxylase Superfamily Protein; Malonyl-CoA Decarboxylase Protein; MCD Malonyl-CoA Decarboxylase MCD; Malonyl-CoA Decarboxylase Family Protein; Decarboxylase
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MTSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAEVLSRYGQMKTGERIAFFESL LEVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQELFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFT HLFSSWFNRGFLVLRRIDWSTPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETP GAIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTTFVTLSPVPGFRKWLDAERRN ADSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALSAHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSE KGIAQAYGTMVNYRYVLADIEKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ
Sequences:
>Translated_456_residues MTSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAEVLSRYGQMKTGERIAFFESL LEVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQELFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFT HLFSSWFNRGFLVLRRIDWSTPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETP GAIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTTFVTLSPVPGFRKWLDAERRN ADSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALSAHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSE KGIAQAYGTMVNYRYVLADIEKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ >Mature_455_residues TSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAEVLSRYGQMKTGERIAFFESLL EVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQELFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFTH LFSSWFNRGFLVLRRIDWSTPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETPG AIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTTFVTLSPVPGFRKWLDAERRNA DSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALSAHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSEK GIAQAYGTMVNYRYVLADIEKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ
Specific function: Unknown
COG id: COG1593
COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI110349750, Length=419, Percent_Identity=33.6515513126492, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI71985309, Length=401, Percent_Identity=34.6633416458853, Blast_Score=218, Evalue=4e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50432; Mature: 50301
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VLSRYGQMKTGERIAFFESLLEVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQE HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH LFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFTHLFSSWFNRGFLVLRRIDWS HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC TPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHCCC GAIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTT CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE FVTLSPVPGFRKWLDAERRNADSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALS EEEECCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH AHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSEKGIAQAYGTMVNYRYVLADI HHHEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHH EKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ HHCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAE CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VLSRYGQMKTGERIAFFESLLEVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQE HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH LFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFTHLFSSWFNRGFLVLRRIDWS HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC TPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHCCC GAIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTT CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE FVTLSPVPGFRKWLDAERRNADSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALS EEEECCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH AHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSEKGIAQAYGTMVNYRYVLADI HHHEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHH EKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ HHCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA