Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158424921

Identifier: 158424921

GI number: 158424921

Start: 3808402

End: 3809772

Strand: Direct

Name: 158424921

Synonym: AZC_3297

Alternate gene names: NA

Gene position: 3808402-3809772 (Clockwise)

Preceding gene: 158424919

Following gene: 158424922

Centisome position: 70.92

GC content: 66.96

Gene sequence:

>1371_bases
ATGACGTCCAACAGTTCCTTCTTCGGCGATCTCCTCAACTCCATCGCGGACCGCGGCCGCGCGCTGCTCGACCGGTCGGG
CCGCAGCACCGGCGCCACGCGGGCGGCGACCCTGGTGGAGCGCTGCCAGGAACTGCTGTCGGGCAAGGGCGAGGCGTCCG
GCGTCGCGCTGGCCGCCGAAGTCCTCTCCCGCTACGGACAGATGAAGACCGGCGAGCGCATCGCCTTCTTCGAAAGCCTG
CTGGAAGTCTTCGGCCCGGACAAGGAGCGGCTGGAAAAGGCCATCGCCGCTTATTCCGCGAAGCCCGGCGAAGCCGCCAT
CGCGGAACTGCATGCCGCCAGCGAGCCGCGCCGACAGGAGTTGTTCCGCCGCTTCAACATGGCCCCCGGCGCCACCGCCG
AACTGGTGCGCATGCGCGAGCATCTCATGGACGCCCTGCCCCGGCGCAAGGACCTGACGCCGGTGGACAGCGATTTCACG
CACCTCTTCTCCTCCTGGTTCAATCGGGGGTTCCTCGTGCTGCGCCGGATCGACTGGTCCACGCCCGCCAATGTGCTGGA
GAAGATCATCCGCTATGAGGCGGTTCACGCCATCCGCGACTGGAACGACCTGCGCGCCCGCGTCGACAGCCCGGACCGGC
ACTGCTACGCCTTCTTCCATCCCGCGCTGGTGGACGAGCCGCTGATCTTCGTCGAGGTGGCGCTGATGCGCGAGACGCCC
GGCGCCATCGCCCCCATCCTCGACCAGTCTCGCGAACCCATCGCGCCCGGAACCGCCACGACGGCGGTCTTCTATTCCAT
CTCCAACTGCCAGCGCGGCCTCGGCGGGGTCAGCTTCGGCAATTTCCTCATCAAGCAGGTGGTGGAGGAGATCTCCCGCG
AGATCCCCTCGCTCACCACCTTTGTCACGCTCTCGCCCGTGCCCGGCTTCCGCAAATGGCTGGATGCCGAGAGGCGTAAC
GCGGACTCCACGGTCCTGACGGCCGCCGACCGTGAACTGCTCGCCCTGACCGACAGCGCGGAATGGACGGAGCAGGATGC
AGTGCGCGCGGAACTGTCCTCGCTGATGAGCGCGCTCTCGGCGCATTATTTCCTGCAGGCCAAGACACCGAAGGGGCGCC
CGATCGACCCGGTCGCGCGCTTCCATCTCGGCAACGGCGCTCGCCTCGAGCGCATCAACCCCATGGGCGACCTGTCGGAA
AAGGGCATCGCCCAGGCCTATGGGACCATGGTCAACTACCGCTATGTGCTCGCGGACATCGAAAAGAACCACGAGGCCTT
CGCCGCCAAGGGCGAAGTGGTGGCGAGCACAGTGGTGAAGAAACTCCTGCGGGGCGAAAACGCGCCGCGCGCTCTGGTGC
CGACCCAATGA

Upstream 100 bases:

>100_bases
TGCTACAGTGGATGCGAGGCTGAACGGTGCGCGCGGCGGTTTCCTCGATCTCCGTCCGGCGCGGTCGCCGTCCCGGCCCG
CAACCGAGAGGACCGGCGTG

Downstream 100 bases:

>100_bases
CCTCTCAGAACCATTTCTTTGCCGCCATCCGCGCGGCCATGCCCGATCTGTCGAAGCCGCTCGCCACCCATCCGGATGGC
GCGATGGAGACCTATGGCGA

Product: malonyl-CoA decarboxylase

Products: NA

Alternate protein names: Malonyl-CoA Decarboxylase Superfamily; Malonyl-CoA Decarboxylase Superfamily Protein; Malonyl-CoA Decarboxylase Protein; MCD Malonyl-CoA Decarboxylase MCD; Malonyl-CoA Decarboxylase Family Protein; Decarboxylase

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MTSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAEVLSRYGQMKTGERIAFFESL
LEVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQELFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFT
HLFSSWFNRGFLVLRRIDWSTPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETP
GAIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTTFVTLSPVPGFRKWLDAERRN
ADSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALSAHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSE
KGIAQAYGTMVNYRYVLADIEKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ

Sequences:

>Translated_456_residues
MTSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAEVLSRYGQMKTGERIAFFESL
LEVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQELFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFT
HLFSSWFNRGFLVLRRIDWSTPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETP
GAIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTTFVTLSPVPGFRKWLDAERRN
ADSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALSAHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSE
KGIAQAYGTMVNYRYVLADIEKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ
>Mature_455_residues
TSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAEVLSRYGQMKTGERIAFFESLL
EVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQELFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFTH
LFSSWFNRGFLVLRRIDWSTPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETPG
AIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTTFVTLSPVPGFRKWLDAERRNA
DSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALSAHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSEK
GIAQAYGTMVNYRYVLADIEKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110349750, Length=419, Percent_Identity=33.6515513126492, Blast_Score=214, Evalue=9e-56,
Organism=Caenorhabditis elegans, GI71985309, Length=401, Percent_Identity=34.6633416458853, Blast_Score=218, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50432; Mature: 50301

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VLSRYGQMKTGERIAFFESLLEVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQE
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
LFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFTHLFSSWFNRGFLVLRRIDWS
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC
TPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHCCC
GAIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTT
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE
FVTLSPVPGFRKWLDAERRNADSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALS
EEEECCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
AHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSEKGIAQAYGTMVNYRYVLADI
HHHEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHH
EKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ
HHCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TSNSSFFGDLLNSIADRGRALLDRSGRSTGATRAATLVERCQELLSGKGEASGVALAAE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VLSRYGQMKTGERIAFFESLLEVFGPDKERLEKAIAAYSAKPGEAAIAELHAASEPRRQE
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
LFRRFNMAPGATAELVRMREHLMDALPRRKDLTPVDSDFTHLFSSWFNRGFLVLRRIDWS
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC
TPANVLEKIIRYEAVHAIRDWNDLRARVDSPDRHCYAFFHPALVDEPLIFVEVALMRETP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHCCC
GAIAPILDQSREPIAPGTATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLTT
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE
FVTLSPVPGFRKWLDAERRNADSTVLTAADRELLALTDSAEWTEQDAVRAELSSLMSALS
EEEECCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
AHYFLQAKTPKGRPIDPVARFHLGNGARLERINPMGDLSEKGIAQAYGTMVNYRYVLADI
HHHEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHH
EKNHEAFAAKGEVVASTVVKKLLRGENAPRALVPTQ
HHCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA