Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158424883

Identifier: 158424883

GI number: 158424883

Start: 3760124

End: 3762715

Strand: Direct

Name: 158424883

Synonym: AZC_3259

Alternate gene names: NA

Gene position: 3760124-3762715 (Clockwise)

Preceding gene: 158424882

Following gene: 158424884

Centisome position: 70.02

GC content: 62.85

Gene sequence:

>2592_bases
ATGTTTCGCCAGCTCGATTATCAGGACCGCGTGCTCTCTACGCTCGATGCCTATCTCGACCTTTTGAAGGAGAAGAAAGC
ACGTGCAGACAAGGTGGCAGCGCTCGCCGAACAAGACCCTGACCTTGGCCTCGCCATTCCGGATTTTGCGAAGGACGCTT
GGGAAGCGATGAAGGCTGCGAACAAGCTGCCCGCTTCGCGCGCGGCTATTCCGTTCTCGCCGCGCATGGACGGCTGCGAG
CGGCCAGTGCCCAACGCCGTGCTGAAAGTGCCTACCGGCGGTGGCAAGACTTGGCTCGCCGTCTCTGCGGTGTCGCGGGT
GATGGGCCGCTATCTCGACCGCAACACCGGCTTCGTCCTGTGGATCGTGCCGAACGAGGCGATTTATACGCAGACGCTCA
AGCATCTGAAGGATCGCCAGCACCCCTATCGCCAGGCGCTTGACCGCGCGGCGGCGGGGCGTGTGAAGATCATGGAGAAA
ACTGACCGGCTCGATGCGCGGGACGTGGAAAGCAATCTCTGCATCATGCTGCTGATGCTGCAATCCGCAAACCGCGAGAC
GCAGGATTCCCTGAAAATGTTTCAGGACCGGGGCGACGTGCATGGCTTCTTCCCGCCCGAAGGCGAACAACAGGCGCATC
AGGCCGTCATCGACCGCACGCCGAACCTCTCCGCCTATACGGGCATGTTCCCGATGGTGAAGGACTCCCTCGGGAACGCC
CTTCGGATCATCCGGCCCGTGGTCGTGATGGATGAGGGCCACCGCGCCATTTCCGATCTCGCTTTCGGCACGCTTTACGG
ATTCAACCCGTGTTTCGTGCTGGAGCTGACGGCCACGCCGCAGGATGTGCAGCCGCGTGGCGGCCGCAATCCGCGCGAAG
GCCGCTATGCCAATGTGCTGGTGGAAGTGACGGGGCGCGAGCTGGACCGTGAAGGCATGATAAAGATGCCGCTCAACCTT
GATCCCCGGCAGGGCAATGACTGGAAGGCGACGCTGAACGCGGCGCTTGCCAAGCTCAACGCGCTCGATGCCGAAGCCCG
GCAATTGCGGGCCGATACGGGCCGCTATATTCGCCCGATCATGCTGATCCAGGTCGAGCGCACGGGCGCGGATCAGCGCG
AAAGCGGCCATATCCATGCGGAAGATGTAAAAGACTGGCTCCTGACGGCGGGTTTCGACCAGGCGGAAATCGCGATTAAA
ACCGCCCAGCAAAACGACCTCAACGATCCCGAAAATCAGGACCTGCTCTCGCCCACCAACCGGGTGCGGGCGATCATCAC
GAAACAGGCGTTGCAAGAAGGTTGGGATTGCCCCTTCGCCTATGTGCTGTGCAGCCTTGCGGCCAGCGCCAACCTCAAGG
CCATGACCCAGCTTGTCGGCCGCATTCTCCGCCAGCCCGGCGCGCTCAAAACGGACGTTGAAGCGCTCGATGAGTGCCAC
GTCATCACGCATCACGCCGATACTGCGACGGTCGTCGGTGCCATTAAAGACGGCCTCGAACAGGACGGCCTCGGCGATCT
GGTCCTGCGCGTGACGCAGGACGACAAGAGCGGGACCGGTAAGACTGCCCGCACGATCAATCGCCGCCCGGCTTTCGCCT
CCACGGAAATCTACCTGCCCAAGGTGATGGTGGTGGAAAGCGGCGACGCGCGCGAGCTGGACTACGAGACGGATGTGCTT
TCCGCGCTCGACTGGCGGGGCTTCGATCCGCAGGACATCGCGGATCGGGTGCCCGAAAACGCACAGGCGGCGGAAAGCCA
GCTCCAACGGATCAGGCTTGCCGAGGACGGCGACGAATTGTTCGTCGGCGAGACTGTCGCCGCCAACGCGGAAATCCTCG
CCTTCGATCCGGCGCATGCCGTCCGGATGATTTCCGACATCGTGCCGAATCCCTTCGTCGGCCGCGAGATTGTCGGCGCG
ACGGTTGCGGCCCTGCGGGCGCGGGGCTTCGATGACGCGAAGCTCGGCCTGCTCGCTAGCCTGATCGTGGAAGAGCTGCG
CAAGGGCCTCGAAGCGGCGCGGAACGCGCGCGCCGAAGCCCTGTTCAAGGCCGAGGTAGCGGCGGGACGCATCCAGTTCC
GCTTGCGGCTCGATGGCCGCAACTGGCGAATGCCGTTCAGCATCGAAACGACGGAACCGGAGAACGCGCGCCAGCTCCTG
AACCGCGCGGGCGGCCCGCTCGAAAAGAGTCTTTTCGCGCCGGTCTACGAGAACGAGCTGAACAGCGACGAGCGGGATGT
GGCGGTCTATCTCGACGGCGAAAAGACGCTGGCCTGGTGGCACCGCAATGTCGCGCGGACGCAATACGGCATTCAGGGAT
GGAAGAAGGCCAAAATTTATCCGGATTTCATCTTCGCCGTTCAGCGCGATGGCGAAGCGAAGCGGATCACGGTGCTGGAA
ACCAAGGGCGACCAGCTCGACAACCTCGACACGGCGTACAAGCGCGAGGCGCTGGCGTTCCTCTCGGACCATTTCGAATG
GGACGAGGCAACTCCGGTCGGCGAGCTGGAACTGGTCAACAACGGCGAGACCGTGGAAGGCACCTTGATCCTGATGAGCG
AATGGAAGGCGAAACTGCCCGCGTATCTCTGA

Upstream 100 bases:

>100_bases
GCGCGTTTCGTGAGCCAGAAGATGCTGGCGGAACAGAACATCCCTGTGGAGTTCGTGCCGCTGCCCTTCGCGCTTTACCG
CATAGACCGGAGCTGACGCC

Downstream 100 bases:

>100_bases
CGGCGCGGTATTGGGGGGGCGTATGGAATTTGATCCGGCATTGTCATTCTCGGACAACCTTGCCCGTTTCCGGGCGGAAG
CGGAGCGCATCGATGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Restriction Res Subunit; Type III Restriction; Type III Restriction Res Subunit Family; Restriction Endonuclease; Type III Restriction Res Subunit Superfamily; Type III Restriction- System RcaSBIIP Res Subunit

Number of amino acids: Translated: 863; Mature: 863

Protein sequence:

>863_residues
MFRQLDYQDRVLSTLDAYLDLLKEKKARADKVAALAEQDPDLGLAIPDFAKDAWEAMKAANKLPASRAAIPFSPRMDGCE
RPVPNAVLKVPTGGGKTWLAVSAVSRVMGRYLDRNTGFVLWIVPNEAIYTQTLKHLKDRQHPYRQALDRAAAGRVKIMEK
TDRLDARDVESNLCIMLLMLQSANRETQDSLKMFQDRGDVHGFFPPEGEQQAHQAVIDRTPNLSAYTGMFPMVKDSLGNA
LRIIRPVVVMDEGHRAISDLAFGTLYGFNPCFVLELTATPQDVQPRGGRNPREGRYANVLVEVTGRELDREGMIKMPLNL
DPRQGNDWKATLNAALAKLNALDAEARQLRADTGRYIRPIMLIQVERTGADQRESGHIHAEDVKDWLLTAGFDQAEIAIK
TAQQNDLNDPENQDLLSPTNRVRAIITKQALQEGWDCPFAYVLCSLAASANLKAMTQLVGRILRQPGALKTDVEALDECH
VITHHADTATVVGAIKDGLEQDGLGDLVLRVTQDDKSGTGKTARTINRRPAFASTEIYLPKVMVVESGDARELDYETDVL
SALDWRGFDPQDIADRVPENAQAAESQLQRIRLAEDGDELFVGETVAANAEILAFDPAHAVRMISDIVPNPFVGREIVGA
TVAALRARGFDDAKLGLLASLIVEELRKGLEAARNARAEALFKAEVAAGRIQFRLRLDGRNWRMPFSIETTEPENARQLL
NRAGGPLEKSLFAPVYENELNSDERDVAVYLDGEKTLAWWHRNVARTQYGIQGWKKAKIYPDFIFAVQRDGEAKRITVLE
TKGDQLDNLDTAYKREALAFLSDHFEWDEATPVGELELVNNGETVEGTLILMSEWKAKLPAYL

Sequences:

>Translated_863_residues
MFRQLDYQDRVLSTLDAYLDLLKEKKARADKVAALAEQDPDLGLAIPDFAKDAWEAMKAANKLPASRAAIPFSPRMDGCE
RPVPNAVLKVPTGGGKTWLAVSAVSRVMGRYLDRNTGFVLWIVPNEAIYTQTLKHLKDRQHPYRQALDRAAAGRVKIMEK
TDRLDARDVESNLCIMLLMLQSANRETQDSLKMFQDRGDVHGFFPPEGEQQAHQAVIDRTPNLSAYTGMFPMVKDSLGNA
LRIIRPVVVMDEGHRAISDLAFGTLYGFNPCFVLELTATPQDVQPRGGRNPREGRYANVLVEVTGRELDREGMIKMPLNL
DPRQGNDWKATLNAALAKLNALDAEARQLRADTGRYIRPIMLIQVERTGADQRESGHIHAEDVKDWLLTAGFDQAEIAIK
TAQQNDLNDPENQDLLSPTNRVRAIITKQALQEGWDCPFAYVLCSLAASANLKAMTQLVGRILRQPGALKTDVEALDECH
VITHHADTATVVGAIKDGLEQDGLGDLVLRVTQDDKSGTGKTARTINRRPAFASTEIYLPKVMVVESGDARELDYETDVL
SALDWRGFDPQDIADRVPENAQAAESQLQRIRLAEDGDELFVGETVAANAEILAFDPAHAVRMISDIVPNPFVGREIVGA
TVAALRARGFDDAKLGLLASLIVEELRKGLEAARNARAEALFKAEVAAGRIQFRLRLDGRNWRMPFSIETTEPENARQLL
NRAGGPLEKSLFAPVYENELNSDERDVAVYLDGEKTLAWWHRNVARTQYGIQGWKKAKIYPDFIFAVQRDGEAKRITVLE
TKGDQLDNLDTAYKREALAFLSDHFEWDEATPVGELELVNNGETVEGTLILMSEWKAKLPAYL
>Mature_863_residues
MFRQLDYQDRVLSTLDAYLDLLKEKKARADKVAALAEQDPDLGLAIPDFAKDAWEAMKAANKLPASRAAIPFSPRMDGCE
RPVPNAVLKVPTGGGKTWLAVSAVSRVMGRYLDRNTGFVLWIVPNEAIYTQTLKHLKDRQHPYRQALDRAAAGRVKIMEK
TDRLDARDVESNLCIMLLMLQSANRETQDSLKMFQDRGDVHGFFPPEGEQQAHQAVIDRTPNLSAYTGMFPMVKDSLGNA
LRIIRPVVVMDEGHRAISDLAFGTLYGFNPCFVLELTATPQDVQPRGGRNPREGRYANVLVEVTGRELDREGMIKMPLNL
DPRQGNDWKATLNAALAKLNALDAEARQLRADTGRYIRPIMLIQVERTGADQRESGHIHAEDVKDWLLTAGFDQAEIAIK
TAQQNDLNDPENQDLLSPTNRVRAIITKQALQEGWDCPFAYVLCSLAASANLKAMTQLVGRILRQPGALKTDVEALDECH
VITHHADTATVVGAIKDGLEQDGLGDLVLRVTQDDKSGTGKTARTINRRPAFASTEIYLPKVMVVESGDARELDYETDVL
SALDWRGFDPQDIADRVPENAQAAESQLQRIRLAEDGDELFVGETVAANAEILAFDPAHAVRMISDIVPNPFVGREIVGA
TVAALRARGFDDAKLGLLASLIVEELRKGLEAARNARAEALFKAEVAAGRIQFRLRLDGRNWRMPFSIETTEPENARQLL
NRAGGPLEKSLFAPVYENELNSDERDVAVYLDGEKTLAWWHRNVARTQYGIQGWKKAKIYPDFIFAVQRDGEAKRITVLE
TKGDQLDNLDTAYKREALAFLSDHFEWDEATPVGELELVNNGETVEGTLILMSEWKAKLPAYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96019; Mature: 96019

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRQLDYQDRVLSTLDAYLDLLKEKKARADKVAALAEQDPDLGLAIPDFAKDAWEAMKAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHH
NKLPASRAAIPFSPRMDGCERPVPNAVLKVPTGGGKTWLAVSAVSRVMGRYLDRNTGFVL
HCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
WIVPNEAIYTQTLKHLKDRQHPYRQALDRAAAGRVKIMEKTDRLDARDVESNLCIMLLML
EEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHCCCCCHHHCCCHHHHHHHH
QSANRETQDSLKMFQDRGDVHGFFPPEGEQQAHQAVIDRTPNLSAYTGMFPMVKDSLGNA
HHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHH
LRIIRPVVVMDEGHRAISDLAFGTLYGFNPCFVLELTATPQDVQPRGGRNPREGRYANVL
HHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
VEVTGRELDREGMIKMPLNLDPRQGNDWKATLNAALAKLNALDAEARQLRADTGRYIRPI
EEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEE
MLIQVERTGADQRESGHIHAEDVKDWLLTAGFDQAEIAIKTAQQNDLNDPENQDLLSPTN
EEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH
RVRAIITKQALQEGWDCPFAYVLCSLAASANLKAMTQLVGRILRQPGALKTDVEALDECH
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCE
VITHHADTATVVGAIKDGLEQDGLGDLVLRVTQDDKSGTGKTARTINRRPAFASTEIYLP
EEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCEEECC
KVMVVESGDARELDYETDVLSALDWRGFDPQDIADRVPENAQAAESQLQRIRLAEDGDEL
EEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE
FVGETVAANAEILAFDPAHAVRMISDIVPNPFVGREIVGATVAALRARGFDDAKLGLLAS
EECCEEECCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LIVEELRKGLEAARNARAEALFKAEVAAGRIQFRLRLDGRNWRMPFSIETTEPENARQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEECEEEEECCCCHHHHHHH
NRAGGPLEKSLFAPVYENELNSDERDVAVYLDGEKTLAWWHRNVARTQYGIQGWKKAKIY
HHCCCCHHHHHCCCHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCCCCCC
PDFIFAVQRDGEAKRITVLETKGDQLDNLDTAYKREALAFLSDHFEWDEATPVGELELVN
CEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
NGETVEGTLILMSEWKAKLPAYL
CCCEEEEEEEEEEHHHCCCCCCC
>Mature Secondary Structure
MFRQLDYQDRVLSTLDAYLDLLKEKKARADKVAALAEQDPDLGLAIPDFAKDAWEAMKAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHH
NKLPASRAAIPFSPRMDGCERPVPNAVLKVPTGGGKTWLAVSAVSRVMGRYLDRNTGFVL
HCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
WIVPNEAIYTQTLKHLKDRQHPYRQALDRAAAGRVKIMEKTDRLDARDVESNLCIMLLML
EEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHCCCCCHHHCCCHHHHHHHH
QSANRETQDSLKMFQDRGDVHGFFPPEGEQQAHQAVIDRTPNLSAYTGMFPMVKDSLGNA
HHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHH
LRIIRPVVVMDEGHRAISDLAFGTLYGFNPCFVLELTATPQDVQPRGGRNPREGRYANVL
HHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
VEVTGRELDREGMIKMPLNLDPRQGNDWKATLNAALAKLNALDAEARQLRADTGRYIRPI
EEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEE
MLIQVERTGADQRESGHIHAEDVKDWLLTAGFDQAEIAIKTAQQNDLNDPENQDLLSPTN
EEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH
RVRAIITKQALQEGWDCPFAYVLCSLAASANLKAMTQLVGRILRQPGALKTDVEALDECH
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCE
VITHHADTATVVGAIKDGLEQDGLGDLVLRVTQDDKSGTGKTARTINRRPAFASTEIYLP
EEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCEEECC
KVMVVESGDARELDYETDVLSALDWRGFDPQDIADRVPENAQAAESQLQRIRLAEDGDEL
EEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE
FVGETVAANAEILAFDPAHAVRMISDIVPNPFVGREIVGATVAALRARGFDDAKLGLLAS
EECCEEECCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LIVEELRKGLEAARNARAEALFKAEVAAGRIQFRLRLDGRNWRMPFSIETTEPENARQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEECEEEEECCCCHHHHHHH
NRAGGPLEKSLFAPVYENELNSDERDVAVYLDGEKTLAWWHRNVARTQYGIQGWKKAKIY
HHCCCCHHHHHCCCHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCCCCCC
PDFIFAVQRDGEAKRITVLETKGDQLDNLDTAYKREALAFLSDHFEWDEATPVGELELVN
CEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
NGETVEGTLILMSEWKAKLPAYL
CCCEEEEEEEEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA