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The map label for this gene is araC [C]

Identifier: 158424847

GI number: 158424847

Start: 3693967

End: 3694947

Strand: Direct

Name: araC [C]

Synonym: AZC_3223

Alternate gene names: 158424847

Gene position: 3693967-3694947 (Clockwise)

Preceding gene: 158424846

Following gene: 158424848

Centisome position: 68.79

GC content: 68.91

Gene sequence:

>981_bases
TTGTCGCGGCCGATCGGCTCTGATGAATACTTGTGTCGCCTCGCGACGTTCCGTGCCCCTGTCACCGCCATGGACATCCG
GCTCGATCCCATCAAGCATGCCGAGCGCGTCACCGGCCGCCGCCAGTCCGCCTTGATCGACCTCTGGTCCAGCGGCGGCT
TTGCAGCGGCCCTGAGCGAGGTGAACGGCCCCCACGTCTATGCCTATGGCGACCTGCCCTGCCCGACCGTCGCCATCACG
CTCTACGACGTGCGCCGGCATGTGCTGATGGAGAACGGCAGCGTGCGCCGCGATGGCAGCGTGCAGGCGGGCCGCTTCCG
CATCGGCGTACCGGGACGCGATGTCCTTGTTGATGCCGTGCCCGCGGTCAACAGCGGCAAGCTGCTGATCCTCTATCTGG
GCGATACCCTGCTGGACGAGATCGGTGCCGCACGCTGTGGCCGCCGGGTCGAGCTGATGGACCGTGCCTGGGACGTGGAC
GATCCCCTGCTGATGCTGGCGTCGCAGCGCATCGTTGAGGCGTGCGCCGAGGCCGCCTCCGGTCGATCCCTGCTGGCGGA
GCAGCTGGCTTATACGCTCGCCCTCCATGTTTCGGACCGGTATGCCGTGCCGCTCGCGGCCAGACGCGCGCCCGAGGTGC
CGGAGCTTGATTCCCGCTTCGGCCAGCGGGTGATTGACCGCGTGCGCAGCGATCCCGGTGCCGACATCACGCTCGCCATG
CTGGCGCAGGAGGCGGGCCTGACGCCGTCGGGCTTCATCCGCGCCTTCCGCCGCGCTACCGGCCTCACGCCGCACCGCTT
CATCCTGGAGGAACGGGTCCGCATCGCACAGGAGCTGCTCGCGGATACCGCGCTTCCCATTGCAGAGGTCGCGCTGGCCG
CCGGCTTCTCGTCTCAGTCCCATCTCGGGGCCACCTTCCGCACGCTTGCGGGAGAGAGCCCGGGCCGCTGGCGGCAGCTG
CGGCAGCGGTCACTTTTCTGA

Upstream 100 bases:

>100_bases
TTGGCGCATAAACCCACAGGCCGAATATCGGCGAGAGTCCGCACGGACCACACAAACGGGGCATGCCTGGGCGCGTCGGG
ACGGCGTCAACCGCCTTGAA

Downstream 100 bases:

>100_bases
CAAAGGCGGCCCCAAGCAGGGCCCATGCGGCCTGTTTTCCGGAAGACGCCGCCGCCGAGATCATCCCACTCTCCCGCCAA
ACGCCGCGCTGAACGGCGAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein; AraC Family Regulatory Protein; AraC Family Transcription Regulator; AraC-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix- Domain Containing Protein AraC Type; Helix-Turn-Helix AraC Type; AraC Family Transcription Regulator Protein; Transcriptional Regulator AraC; Transcriptional Regulator AraC-Type; Transcriptional Activator FtrA; Transcriptional Regulator With PAS/PAC Sensors AraC Family; Transcriptional Activator; AraC/XylS Family Transcription Factor; Helix-Turn-Helix Transcriptional Regulator; Transcription Regulator Protein; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Arabinose Operon Regulatory Protein; Transcriptional Regulator Protein AraC Family; AraC-Type Trancriptional Regulator; AraC Family Helix-Turn-Helix Transcriptional Regulator

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSRPIGSDEYLCRLATFRAPVTAMDIRLDPIKHAERVTGRRQSALIDLWSSGGFAAALSEVNGPHVYAYGDLPCPTVAIT
LYDVRRHVLMENGSVRRDGSVQAGRFRIGVPGRDVLVDAVPAVNSGKLLILYLGDTLLDEIGAARCGRRVELMDRAWDVD
DPLLMLASQRIVEACAEAASGRSLLAEQLAYTLALHVSDRYAVPLAARRAPEVPELDSRFGQRVIDRVRSDPGADITLAM
LAQEAGLTPSGFIRAFRRATGLTPHRFILEERVRIAQELLADTALPIAEVALAAGFSSQSHLGATFRTLAGESPGRWRQL
RQRSLF

Sequences:

>Translated_326_residues
MSRPIGSDEYLCRLATFRAPVTAMDIRLDPIKHAERVTGRRQSALIDLWSSGGFAAALSEVNGPHVYAYGDLPCPTVAIT
LYDVRRHVLMENGSVRRDGSVQAGRFRIGVPGRDVLVDAVPAVNSGKLLILYLGDTLLDEIGAARCGRRVELMDRAWDVD
DPLLMLASQRIVEACAEAASGRSLLAEQLAYTLALHVSDRYAVPLAARRAPEVPELDSRFGQRVIDRVRSDPGADITLAM
LAQEAGLTPSGFIRAFRRATGLTPHRFILEERVRIAQELLADTALPIAEVALAAGFSSQSHLGATFRTLAGESPGRWRQL
RQRSLF
>Mature_325_residues
SRPIGSDEYLCRLATFRAPVTAMDIRLDPIKHAERVTGRRQSALIDLWSSGGFAAALSEVNGPHVYAYGDLPCPTVAITL
YDVRRHVLMENGSVRRDGSVQAGRFRIGVPGRDVLVDAVPAVNSGKLLILYLGDTLLDEIGAARCGRRVELMDRAWDVDD
PLLMLASQRIVEACAEAASGRSLLAEQLAYTLALHVSDRYAVPLAARRAPEVPELDSRFGQRVIDRVRSDPGADITLAML
AQEAGLTPSGFIRAFRRATGLTPHRFILEERVRIAQELLADTALPIAEVALAAGFSSQSHLGATFRTLAGESPGRWRQLR
QRSLF

Specific function: Transcription Activator For The Expression Of The Melab Operon. Melr Binds At Two Sites Located Upstream Of The Melab Transcription Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35621; Mature: 35490

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPIGSDEYLCRLATFRAPVTAMDIRLDPIKHAERVTGRRQSALIDLWSSGGFAAALSE
CCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH
VNGPHVYAYGDLPCPTVAITLYDVRRHVLMENGSVRRDGSVQAGRFRIGVPGRDVLVDAV
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHEECC
PAVNSGKLLILYLGDTLLDEIGAARCGRRVELMDRAWDVDDPLLMLASQRIVEACAEAAS
CCCCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
GRSLLAEQLAYTLALHVSDRYAVPLAARRAPEVPELDSRFGQRVIDRVRSDPGADITLAM
CHHHHHHHHHHHHHEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHH
LAQEAGLTPSGFIRAFRRATGLTPHRFILEERVRIAQELLADTALPIAEVALAAGFSSQS
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
HLGATFRTLAGESPGRWRQLRQRSLF
HHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SRPIGSDEYLCRLATFRAPVTAMDIRLDPIKHAERVTGRRQSALIDLWSSGGFAAALSE
CCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH
VNGPHVYAYGDLPCPTVAITLYDVRRHVLMENGSVRRDGSVQAGRFRIGVPGRDVLVDAV
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHEECC
PAVNSGKLLILYLGDTLLDEIGAARCGRRVELMDRAWDVDDPLLMLASQRIVEACAEAAS
CCCCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
GRSLLAEQLAYTLALHVSDRYAVPLAARRAPEVPELDSRFGQRVIDRVRSDPGADITLAM
CHHHHHHHHHHHHHEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHH
LAQEAGLTPSGFIRAFRRATGLTPHRFILEERVRIAQELLADTALPIAEVALAAGFSSQS
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
HLGATFRTLAGESPGRWRQLRQRSLF
HHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA