Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is namA [H]

Identifier: 158424814

GI number: 158424814

Start: 3647518

End: 3649827

Strand: Reverse

Name: namA [H]

Synonym: AZC_3190

Alternate gene names: 158424814

Gene position: 3649827-3647518 (Counterclockwise)

Preceding gene: 158424832

Following gene: 158424813

Centisome position: 67.97

GC content: 66.36

Gene sequence:

>2310_bases
ATGCGCATCGTCTGCATTGGTGGCGGCCCTGCGGGCCTCTATTTCGGCCTCCTCATGAAGAAGCTGCACCCCGCGCACCA
GATCACGGTGGTGGAGCGCAACAAGCCCTATGACACGTTCGGTTGGGGCGTCGTCTTCTCCGACGCGACCATGGCGGCCA
TGCGGGTCTGGGACCCGGAGACCGCGACCGAGATCGAGGATGCGTTCAACCACTGGGACGACATTGAGGTCTGGTTCAAG
GGCACCCGCCAGCGCACCTCCGGCCATGGCTTCGTCGGTATCGGCCGCAAGGCGCTGCTCAACATCCTCCAGCGCCGGTG
CGAGGCGCTCGGCGTCGAACTGGTGTTCGAGCGCGACGTCGAGAGCGACCTCGATTTTCCCGATGCCGACCTCATCATCG
CCTCGGACGGCATCAATTCCAGGATCCGCAACCGTTATGCGGAGGCCTTCCAGCCAGATCTCGTCGTGCGCCCGAACCGC
TACATCTGGCTCGGCACGAAAAAGCTCTATGACGCCTTCACCTTCGACTTTCGCAAGACCGAGCACGGCTGGTTCCAGGC
TCACATCTACAAGTTCGATGCGCACACCTCGACCTTCATCATCGAGACGACGGAAGAGGCCTATCAGGCCCATGGGCTCG
GGGAGCTGGATCAGGACGGCTCCATCGCCTTCTGCGAGAAGCTGTTTTCCGAGGTGCTCGACGGCGCCCCGCTGATGACC
AATGCGCGCCACCTGCGCGGCTCGGCCTGGCTGAACTTCAACCGGCTGATCTGCGGCAAGTGGAGCCACTTCAACGGCCG
CTCCCATGTGGTGCTCATGGGGGATGCCGCGCATACCGCCCACTTCGCCATCGGCTCCGGCACCAAGCTCGCCATTGATG
ACGCCATCGAGCTTGCCAGGCAGTTCAACGAGATCGGCCACGGCGTGGAGACGATCCCGTCCGTGCTCTCGGTCTATGAG
GAGATCCGCCGCGTCGATGTGGCCCGCATCCAGAATGCGGCCCGCAACGCCATGGAATGGTTCGAGGTGGTCGGCCGCCG
CTATGCCGACAGCCTGGAGCCGGAGCAGTTCATGTATTCCATGCTGACGCGCTCCCAGCGCATCAGCCACGAGAACTTGC
GCCTGCGCGACCGCGCGTGGCTGGAGGGTTATGAGCGCTGGTTCGCGCGCCGCGCCGGCCTGCCCGTGGAGACCAACGGC
CGCGTGACGCCGCCCATGTTCACGCCCTACCGCCTGCGGGACGTGACGCTGCCCAACCGCATCGTCGTTTCTCCCATGGC
CATGTACTCGGCGACGGACGGCGTGCTCGGCGACTTCCATCTCGTCCATCTCGGCGCCCGTGCCATGGGCGGCGCGGGGC
TCGTCTTCGCCGAAATGACCTGCGTGTCGCCGGATGCACGGATCACCCCCGGCTGTCTCGGCCTGTGGGACGACGGGCAG
ATCGAGGGCTGGAAGCGGTTCGTCGATTTCGTCCATGCCAACACGGGCGCCAAGGTGGCCTGCCAGCTCGGCCACGCCGG
GCGCAAAGGCGCCACCAAGCGCGCGTGGGAGGGCATCGACCAGCCGCTGGAAGAGGACGGCTGGCCGCTGATTTCCGCCT
CGGCCCTGCCGTACCTCAAGCACAGCCAGGTGCCGAAGGCGATGGACCGCGCCGACATGGATCGCGTCGTCGCCGATTTC
GTGGCCGCCACCCGGCGCGCGGCGGCGGCGGGCGTGGACTGGCTGGAGCTCCATGCCGCGCACGGCTATCTGCTGTCGAG
CTTCCTCTCGCCGCTCACCAACCGGCGCACGGACGACTATGGCGGCTCGCACGCAGCCCGCGCCCGCTTCCCGCTCGAAG
TGTTCCGGGCCATCCGCGCTGTGTGGCCGGCGGAGCGGCCGATCTCCGTGCGCCTGTCCTGTCATGACTGGACCGAGGGC
GGCAACACGCCGGAGGATGCCGCCATCTTCGCCACCATGTTCAAGGAGGCGGGTGCCGATCTCATCGACTGTTCGTCCGG
GCAGGTATGGAAGGAGGAGCGGCCGGTCTATGGCCGGCTGTTCCAGACCCCATTCTCCGACAAGATCCGAAACGAGGTGG
GCATTCCCACCATTGCCGTCGGCGCCATCTCGGAAGCCGATCACGCCAATTCCATCATCGCGGCGGGGCGTGCGGACCTC
TGCGCCATTGCCCGGCCGCATCTGGCCGACCCCGCTTGGTCGCTGCACGAGGCGGCGAAGATCGGCCTGAAGACGGTGCC
CTGGCCCAAGCAGTATGCCTCCGCCAAGGGCCAGTATGAGGCCAATCTCGAACGCGCATCGGCGCAGTGA

Upstream 100 bases:

>100_bases
GCGAGCCTGATCCGGTTGACAGGCGCGCGAAAGCTCCATTACTTTAACTTTAAAGCAATTCGCGCGGCACGTCGCGTGCC
CGTCGAGGGGGAAGAACTCC

Downstream 100 bases:

>100_bases
GGGACGCAATGGGCGATCTCGACGCCATCGCGGGCCGCCACGTCCTCGTCACCGGCGCGGGCTCGGGCATCGGCGCTTCC
GTTGCGCGCCGTCTCGGCCG

Product: salicylyl-CoA 5-hydroxylase

Products: NA

Alternate protein names: Xenobiotic reductase [H]

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MRIVCIGGGPAGLYFGLLMKKLHPAHQITVVERNKPYDTFGWGVVFSDATMAAMRVWDPETATEIEDAFNHWDDIEVWFK
GTRQRTSGHGFVGIGRKALLNILQRRCEALGVELVFERDVESDLDFPDADLIIASDGINSRIRNRYAEAFQPDLVVRPNR
YIWLGTKKLYDAFTFDFRKTEHGWFQAHIYKFDAHTSTFIIETTEEAYQAHGLGELDQDGSIAFCEKLFSEVLDGAPLMT
NARHLRGSAWLNFNRLICGKWSHFNGRSHVVLMGDAAHTAHFAIGSGTKLAIDDAIELARQFNEIGHGVETIPSVLSVYE
EIRRVDVARIQNAARNAMEWFEVVGRRYADSLEPEQFMYSMLTRSQRISHENLRLRDRAWLEGYERWFARRAGLPVETNG
RVTPPMFTPYRLRDVTLPNRIVVSPMAMYSATDGVLGDFHLVHLGARAMGGAGLVFAEMTCVSPDARITPGCLGLWDDGQ
IEGWKRFVDFVHANTGAKVACQLGHAGRKGATKRAWEGIDQPLEEDGWPLISASALPYLKHSQVPKAMDRADMDRVVADF
VAATRRAAAAGVDWLELHAAHGYLLSSFLSPLTNRRTDDYGGSHAARARFPLEVFRAIRAVWPAERPISVRLSCHDWTEG
GNTPEDAAIFATMFKEAGADLIDCSSGQVWKEERPVYGRLFQTPFSDKIRNEVGIPTIAVGAISEADHANSIIAAGRADL
CAIARPHLADPAWSLHEAAKIGLKTVPWPKQYASAKGQYEANLERASAQ

Sequences:

>Translated_769_residues
MRIVCIGGGPAGLYFGLLMKKLHPAHQITVVERNKPYDTFGWGVVFSDATMAAMRVWDPETATEIEDAFNHWDDIEVWFK
GTRQRTSGHGFVGIGRKALLNILQRRCEALGVELVFERDVESDLDFPDADLIIASDGINSRIRNRYAEAFQPDLVVRPNR
YIWLGTKKLYDAFTFDFRKTEHGWFQAHIYKFDAHTSTFIIETTEEAYQAHGLGELDQDGSIAFCEKLFSEVLDGAPLMT
NARHLRGSAWLNFNRLICGKWSHFNGRSHVVLMGDAAHTAHFAIGSGTKLAIDDAIELARQFNEIGHGVETIPSVLSVYE
EIRRVDVARIQNAARNAMEWFEVVGRRYADSLEPEQFMYSMLTRSQRISHENLRLRDRAWLEGYERWFARRAGLPVETNG
RVTPPMFTPYRLRDVTLPNRIVVSPMAMYSATDGVLGDFHLVHLGARAMGGAGLVFAEMTCVSPDARITPGCLGLWDDGQ
IEGWKRFVDFVHANTGAKVACQLGHAGRKGATKRAWEGIDQPLEEDGWPLISASALPYLKHSQVPKAMDRADMDRVVADF
VAATRRAAAAGVDWLELHAAHGYLLSSFLSPLTNRRTDDYGGSHAARARFPLEVFRAIRAVWPAERPISVRLSCHDWTEG
GNTPEDAAIFATMFKEAGADLIDCSSGQVWKEERPVYGRLFQTPFSDKIRNEVGIPTIAVGAISEADHANSIIAAGRADL
CAIARPHLADPAWSLHEAAKIGLKTVPWPKQYASAKGQYEANLERASAQ
>Mature_769_residues
MRIVCIGGGPAGLYFGLLMKKLHPAHQITVVERNKPYDTFGWGVVFSDATMAAMRVWDPETATEIEDAFNHWDDIEVWFK
GTRQRTSGHGFVGIGRKALLNILQRRCEALGVELVFERDVESDLDFPDADLIIASDGINSRIRNRYAEAFQPDLVVRPNR
YIWLGTKKLYDAFTFDFRKTEHGWFQAHIYKFDAHTSTFIIETTEEAYQAHGLGELDQDGSIAFCEKLFSEVLDGAPLMT
NARHLRGSAWLNFNRLICGKWSHFNGRSHVVLMGDAAHTAHFAIGSGTKLAIDDAIELARQFNEIGHGVETIPSVLSVYE
EIRRVDVARIQNAARNAMEWFEVVGRRYADSLEPEQFMYSMLTRSQRISHENLRLRDRAWLEGYERWFARRAGLPVETNG
RVTPPMFTPYRLRDVTLPNRIVVSPMAMYSATDGVLGDFHLVHLGARAMGGAGLVFAEMTCVSPDARITPGCLGLWDDGQ
IEGWKRFVDFVHANTGAKVACQLGHAGRKGATKRAWEGIDQPLEEDGWPLISASALPYLKHSQVPKAMDRADMDRVVADF
VAATRRAAAAGVDWLELHAAHGYLLSSFLSPLTNRRTDDYGGSHAARARFPLEVFRAIRAVWPAERPISVRLSCHDWTEG
GNTPEDAAIFATMFKEAGADLIDCSSGQVWKEERPVYGRLFQTPFSDKIRNEVGIPTIAVGAISEADHANSIIAAGRADL
CAIARPHLADPAWSLHEAAKIGLKTVPWPKQYASAKGQYEANLERASAQ

Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787939, Length=344, Percent_Identity=29.9418604651163, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1789463, Length=339, Percent_Identity=29.7935103244838, Blast_Score=112, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI72001454, Length=297, Percent_Identity=28.6195286195286, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17559804, Length=298, Percent_Identity=26.8456375838926, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17564188, Length=298, Percent_Identity=26.510067114094, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17565138, Length=298, Percent_Identity=27.8523489932886, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17559802, Length=232, Percent_Identity=30.1724137931034, Blast_Score=98, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17540738, Length=258, Percent_Identity=29.0697674418605, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17566914, Length=275, Percent_Identity=26.5454545454545, Blast_Score=77, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6325086, Length=266, Percent_Identity=29.6992481203008, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6321973, Length=243, Percent_Identity=30.8641975308642, Blast_Score=100, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001155 [H]

Pfam domain/function: PF00724 Oxidored_FMN [H]

EC number: =1.6.99.1 [H]

Molecular weight: Translated: 85810; Mature: 85810

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVCIGGGPAGLYFGLLMKKLHPAHQITVVERNKPYDTFGWGVVFSDATMAAMRVWDPE
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCHHEEHHEECCCC
TATEIEDAFNHWDDIEVWFKGTRQRTSGHGFVGIGRKALLNILQRRCEALGVELVFERDV
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCEEEEEECCC
ESDLDFPDADLIIASDGINSRIRNRYAEAFQPDLVVRPNRYIWLGTKKLYDAFTFDFRKT
CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECCCCEEEECCHHHHHHHHHCCCCC
EHGWFQAHIYKFDAHTSTFIIETTEEAYQAHGLGELDQDGSIAFCEKLFSEVLDGAPLMT
CCCEEEEEEEEEECCCEEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
NARHLRGSAWLNFNRLICGKWSHFNGRSHVVLMGDAAHTAHFAIGSGTKLAIDDAIELAR
CHHHHCCCEEEEECEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEHHHHHHHHH
QFNEIGHGVETIPSVLSVYEEIRRVDVARIQNAARNAMEWFEVVGRRYADSLEPEQFMYS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MLTRSQRISHENLRLRDRAWLEGYERWFARRAGLPVETNGRVTPPMFTPYRLRDVTLPNR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCE
IVVSPMAMYSATDGVLGDFHLVHLGARAMGGAGLVFAEMTCVSPDARITPGCLGLWDDGQ
EEECCHHHHHCCCCCCCCCHHEEHHHHHCCCCCEEEEEEEECCCCCCCCCCEEECCCCCC
IEGWKRFVDFVHANTGAKVACQLGHAGRKGATKRAWEGIDQPLEEDGWPLISASALPYLK
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCCCEEECCCCCCHH
HSQVPKAMDRADMDRVVADFVAATRRAAAAGVDWLELHAAHGYLLSSFLSPLTNRRTDDY
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGSHAARARFPLEVFRAIRAVWPAERPISVRLSCHDWTEGGNTPEDAAIFATMFKEAGAD
CCCCCHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC
LIDCSSGQVWKEERPVYGRLFQTPFSDKIRNEVGIPTIAVGAISEADHANSIIAAGRADL
EEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCH
CAIARPHLADPAWSLHEAAKIGLKTVPWPKQYASAKGQYEANLERASAQ
HHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHCHHHCCCC
>Mature Secondary Structure
MRIVCIGGGPAGLYFGLLMKKLHPAHQITVVERNKPYDTFGWGVVFSDATMAAMRVWDPE
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCHHEEHHEECCCC
TATEIEDAFNHWDDIEVWFKGTRQRTSGHGFVGIGRKALLNILQRRCEALGVELVFERDV
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCEEEEEECCC
ESDLDFPDADLIIASDGINSRIRNRYAEAFQPDLVVRPNRYIWLGTKKLYDAFTFDFRKT
CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECCCCEEEECCHHHHHHHHHCCCCC
EHGWFQAHIYKFDAHTSTFIIETTEEAYQAHGLGELDQDGSIAFCEKLFSEVLDGAPLMT
CCCEEEEEEEEEECCCEEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
NARHLRGSAWLNFNRLICGKWSHFNGRSHVVLMGDAAHTAHFAIGSGTKLAIDDAIELAR
CHHHHCCCEEEEECEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEHHHHHHHHH
QFNEIGHGVETIPSVLSVYEEIRRVDVARIQNAARNAMEWFEVVGRRYADSLEPEQFMYS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MLTRSQRISHENLRLRDRAWLEGYERWFARRAGLPVETNGRVTPPMFTPYRLRDVTLPNR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCE
IVVSPMAMYSATDGVLGDFHLVHLGARAMGGAGLVFAEMTCVSPDARITPGCLGLWDDGQ
EEECCHHHHHCCCCCCCCCHHEEHHHHHCCCCCEEEEEEEECCCCCCCCCCEEECCCCCC
IEGWKRFVDFVHANTGAKVACQLGHAGRKGATKRAWEGIDQPLEEDGWPLISASALPYLK
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCCCEEECCCCCCHH
HSQVPKAMDRADMDRVVADFVAATRRAAAAGVDWLELHAAHGYLLSSFLSPLTNRRTDDY
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGSHAARARFPLEVFRAIRAVWPAERPISVRLSCHDWTEGGNTPEDAAIFATMFKEAGAD
CCCCCHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC
LIDCSSGQVWKEERPVYGRLFQTPFSDKIRNEVGIPTIAVGAISEADHANSIIAAGRADL
EEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCH
CAIARPHLADPAWSLHEAAKIGLKTVPWPKQYASAKGQYEANLERASAQ
HHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA