| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ssuC [H]
Identifier: 158424792
GI number: 158424792
Start: 3623076
End: 3623873
Strand: Reverse
Name: ssuC [H]
Synonym: AZC_3168
Alternate gene names: 158424792
Gene position: 3623873-3623076 (Counterclockwise)
Preceding gene: 158424793
Following gene: 158424791
Centisome position: 67.49
GC content: 68.05
Gene sequence:
>798_bases ATGACCGCGCCCCTCGTTGAAACCGTCCCAGTGGCCTCCGCTCCCTGGCTCTCGCCGCGCCTGCGCCGCGGGCTCGTCCT GCCGCTGCTGCTGCTCATCACCTGGGAGGCGTCCAGCCACCTACGGCTGGTGGACCCGCGTTTCCTGCCGCCACTGGAGG CCATCGCCATCACCGGCTGGGAGGAGATCTGGAGCGGCGATCTCTTCCTGCATCTGGGCGCGAGCCTTGCCCGCAATCTC ACCGGCTTTGCCATTGGCTCTGTGCTAGGCATCGCCTTCGGCCTGCTGCTTGGCCTCTCGCCGCTCGCTGCGCGCATCGC CGGGCCGAGCTTCCATGCGGCCAAGCAGATCGCGGTGCTGGCCTGGATCCCCATCATCTCGGTGTGGTTCGGCTTTGCCG AGACGGCGAAGGTGGTGTTCGTGGCGGTTGCCGCCTTCGTGCCGGTGGCGCTCAACACCATCGAGGGCGTGGCGAGCGCG CCCAAGGCGCTGGTGGAAGTCAGCGACGTGCTCACCTTCTCCCGCCGGCAACGCATCCGGCGCGTCTATCTGCCCTCCGC GCTGCCCTCCATCCTCACCGGTATCCATCTCGGCCTCATCTACGCCTGGCTCGCCACCGTGGCGGCGGAATATTTCATGA CCGTCGGCCCCGGCATCGGCGGGCTCATCATCGCCGGGCGCGAGCGCTTCCAGATGGAGCTGGTGATGCTGGGCGTCGTC ATCCTCGGCGCGGTCGGTTTCCTCCTCAATCACATTGCGACCCTCATCGAGGCGCGCCTGCTGCGCTGGCGTGCCTGA
Upstream 100 bases:
>100_bases CCATGGTCATCATCGGCCTCGTGGGCTTTGCCATGGACAAGCTCCTCGCCCTCGTGGAAGCCCGGCTGCAAAGCTGGCGC ATCGACGCCTGAGGCCCGCC
Downstream 100 bases:
>100_bases ACGGAGTTTCCATGTCTGTTGCGTCTTCCGGCGGCCGCCTCGGCCGCCGCCAGTTTCTGAGCGGTGCCGCTGCCGGCCTC GTGGCGGGTGCCGCCGGCCC
Product: sulfate ester transporter permease component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTAPLVETVPVASAPWLSPRLRRGLVLPLLLLITWEASSHLRLVDPRFLPPLEAIAITGWEEIWSGDLFLHLGASLARNL TGFAIGSVLGIAFGLLLGLSPLAARIAGPSFHAAKQIAVLAWIPIISVWFGFAETAKVVFVAVAAFVPVALNTIEGVASA PKALVEVSDVLTFSRRQRIRRVYLPSALPSILTGIHLGLIYAWLATVAAEYFMTVGPGIGGLIIAGRERFQMELVMLGVV ILGAVGFLLNHIATLIEARLLRWRA
Sequences:
>Translated_265_residues MTAPLVETVPVASAPWLSPRLRRGLVLPLLLLITWEASSHLRLVDPRFLPPLEAIAITGWEEIWSGDLFLHLGASLARNL TGFAIGSVLGIAFGLLLGLSPLAARIAGPSFHAAKQIAVLAWIPIISVWFGFAETAKVVFVAVAAFVPVALNTIEGVASA PKALVEVSDVLTFSRRQRIRRVYLPSALPSILTGIHLGLIYAWLATVAAEYFMTVGPGIGGLIIAGRERFQMELVMLGVV ILGAVGFLLNHIATLIEARLLRWRA >Mature_264_residues TAPLVETVPVASAPWLSPRLRRGLVLPLLLLITWEASSHLRLVDPRFLPPLEAIAITGWEEIWSGDLFLHLGASLARNLT GFAIGSVLGIAFGLLLGLSPLAARIAGPSFHAAKQIAVLAWIPIISVWFGFAETAKVVFVAVAAFVPVALNTIEGVASAP KALVEVSDVLTFSRRQRIRRVYLPSALPSILTGIHLGLIYAWLATVAAEYFMTVGPGIGGLIIAGRERFQMELVMLGVVI LGAVGFLLNHIATLIEARLLRWRA
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=240, Percent_Identity=32.0833333333333, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87081802, Length=238, Percent_Identity=33.6134453781513, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1789033, Length=151, Percent_Identity=31.7880794701987, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28503; Mature: 28372
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPLVETVPVASAPWLSPRLRRGLVLPLLLLITWEASSHLRLVDPRFLPPLEAIAITGW CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHEECCH EEIWSGDLFLHLGASLARNLTGFAIGSVLGIAFGLLLGLSPLAARIAGPSFHAAKQIAVL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AWIPIISVWFGFAETAKVVFVAVAAFVPVALNTIEGVASAPKALVEVSDVLTFSRRQRIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVYLPSALPSILTGIHLGLIYAWLATVAAEYFMTVGPGIGGLIIAGRERFQMELVMLGVV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHH ILGAVGFLLNHIATLIEARLLRWRA HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAPLVETVPVASAPWLSPRLRRGLVLPLLLLITWEASSHLRLVDPRFLPPLEAIAITGW CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHEECCH EEIWSGDLFLHLGASLARNLTGFAIGSVLGIAFGLLLGLSPLAARIAGPSFHAAKQIAVL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AWIPIISVWFGFAETAKVVFVAVAAFVPVALNTIEGVASAPKALVEVSDVLTFSRRQRIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVYLPSALPSILTGIHLGLIYAWLATVAAEYFMTVGPGIGGLIIAGRERFQMELVMLGVV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHH ILGAVGFLLNHIATLIEARLLRWRA HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]