| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yuiH [H]
Identifier: 158424791
GI number: 158424791
Start: 3621811
End: 3623064
Strand: Reverse
Name: yuiH [H]
Synonym: AZC_3167
Alternate gene names: 158424791
Gene position: 3623064-3621811 (Counterclockwise)
Preceding gene: 158424792
Following gene: 158424790
Centisome position: 67.47
GC content: 67.7
Gene sequence:
>1254_bases ATGTCTGTTGCGTCTTCCGGCGGCCGCCTCGGCCGCCGCCAGTTTCTGAGCGGTGCCGCTGCCGGCCTCGTGGCGGGTGC CGCCGGCCCTGCAGCCGCGCAGCAGGGCTCAGGTCCGCTTCAGGTGCCTGTCTGGACGCGGGAGCAGGGTGAGGGCATCG CTTCACCCGCCTATGGCGTGCCCTCGGCCTTCGAGAAGAGCGTGATCCGCAAGCCGCGCACGCCGCCCAAATTCCCGACC GCCGCCTCCACCGGCACACCGTTGCAGCATCTGCACGGCATCATTACCCCGGCCGGCCTGCATTATGAGCGCCACCATGC TGGCGTGCCGGCCATAGACCCGGAGCAGCATCGCCTCGTCATCCATGGCCTTGTGGAGCGCCCGCTCATCCTGACCATGA ACGATATCGCGCGCTTTCCGTCCGTCTCGCGCCTCTGGTTTCTGGAGTGCTCCGGCAATACGCCGCAATGGACCGGCGGC AGCGCCAAATGGACCGTGCAGGAGACCCACGGCCTCATCTCGTGCAGCGAGTGGACCGGCGTTCGGCTCTCCACCCTGCT CGATGAAGTGGGCCTGAAGCCGGAGGCCCGCTGGGTGCTGGCGGAAGGCGCGGACGGCGCCGCCATGACGCGCTCCATCC CGCTCGATGTGGTGCTGGATGAGGCATTAGTCGCCTATGCGCAGAATGGCGAGCATCTGCGCCCCGAGCAGGGTTATCCG CTGCGCCTCGTGCTGCCCGGCATCGAGGGCAACATGAGCATCAAGTGGCTGCGCCGCCTCAAGGTGGGCGACCAGCCGTT CCAGAGCCGTGAGGAAACGTCCAAATACACGGACCTGATGCCCGACGGCACGGCGCGGCAGTTCACCTTCGTCATGGAGA CGAAGTCGGTCATCACCTCGCCTTCCGGCGGCCACCAGTTGCGGGAGAAGGGTTTCTATGAAATCCGGGGCCTCGCCTGG TCCGGGCGCGGGCGCATCCGCAGCGTCGATGTCAGCACCGACGGCGGCGCCACATGGCGGCCGGCAGAATTGCAGGAGCC GGTGCTCTCCCGCTGCCTCACCCGCTTCCGCGTGCCCTGGACCTGGGATGGCGGGCCAGCCCTTCTCCAGAGCCGCGCGG TCGACGAGACCGGCTATGTGCAGCCGAGCCGCCAGCAGCTCGTGGACGTGCGCGGCGTCAATTCCCAATACCATTTCAAC GGCATCCAGACCTGGAAGGTGGCGCCGTCCGGCGAGGTGACCAATGCGGCCTGA
Upstream 100 bases:
>100_bases TGGGCGTCGTCATCCTCGGCGCGGTCGGTTTCCTCCTCAATCACATTGCGACCCTCATCGAGGCGCGCCTGCTGCGCTGG CGTGCCTGAACGGAGTTTCC
Downstream 100 bases:
>100_bases GACCAGACGCCCCCTTCTTCTCGCCGCCGCGCTCACGCTTGCCACCACCGGCGTGGCATACACAGCGCCGCTCGGCATCG GCCATCCGGCGACGCAGGCG
Product: sulfite oxidase and related enzymes
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSVASSGGRLGRRQFLSGAAAGLVAGAAGPAAAQQGSGPLQVPVWTREQGEGIASPAYGVPSAFEKSVIRKPRTPPKFPT AASTGTPLQHLHGIITPAGLHYERHHAGVPAIDPEQHRLVIHGLVERPLILTMNDIARFPSVSRLWFLECSGNTPQWTGG SAKWTVQETHGLISCSEWTGVRLSTLLDEVGLKPEARWVLAEGADGAAMTRSIPLDVVLDEALVAYAQNGEHLRPEQGYP LRLVLPGIEGNMSIKWLRRLKVGDQPFQSREETSKYTDLMPDGTARQFTFVMETKSVITSPSGGHQLREKGFYEIRGLAW SGRGRIRSVDVSTDGGATWRPAELQEPVLSRCLTRFRVPWTWDGGPALLQSRAVDETGYVQPSRQQLVDVRGVNSQYHFN GIQTWKVAPSGEVTNAA
Sequences:
>Translated_417_residues MSVASSGGRLGRRQFLSGAAAGLVAGAAGPAAAQQGSGPLQVPVWTREQGEGIASPAYGVPSAFEKSVIRKPRTPPKFPT AASTGTPLQHLHGIITPAGLHYERHHAGVPAIDPEQHRLVIHGLVERPLILTMNDIARFPSVSRLWFLECSGNTPQWTGG SAKWTVQETHGLISCSEWTGVRLSTLLDEVGLKPEARWVLAEGADGAAMTRSIPLDVVLDEALVAYAQNGEHLRPEQGYP LRLVLPGIEGNMSIKWLRRLKVGDQPFQSREETSKYTDLMPDGTARQFTFVMETKSVITSPSGGHQLREKGFYEIRGLAW SGRGRIRSVDVSTDGGATWRPAELQEPVLSRCLTRFRVPWTWDGGPALLQSRAVDETGYVQPSRQQLVDVRGVNSQYHFN GIQTWKVAPSGEVTNAA >Mature_416_residues SVASSGGRLGRRQFLSGAAAGLVAGAAGPAAAQQGSGPLQVPVWTREQGEGIASPAYGVPSAFEKSVIRKPRTPPKFPTA ASTGTPLQHLHGIITPAGLHYERHHAGVPAIDPEQHRLVIHGLVERPLILTMNDIARFPSVSRLWFLECSGNTPQWTGGS AKWTVQETHGLISCSEWTGVRLSTLLDEVGLKPEARWVLAEGADGAAMTRSIPLDVVLDEALVAYAQNGEHLRPEQGYPL RLVLPGIEGNMSIKWLRRLKVGDQPFQSREETSKYTDLMPDGTARQFTFVMETKSVITSPSGGHQLREKGFYEIRGLAWS GRGRIRSVDVSTDGGATWRPAELQEPVLSRCLTRFRVPWTWDGGPALLQSRAVDETGYVQPSRQQLVDVRGVNSQYHFNG IQTWKVAPSGEVTNAA
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=276, Percent_Identity=34.7826086956522, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI74099702, Length=276, Percent_Identity=34.7826086956522, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI74099694, Length=276, Percent_Identity=34.7826086956522, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71992535, Length=276, Percent_Identity=31.1594202898551, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI18859905, Length=365, Percent_Identity=29.5890410958904, Blast_Score=128, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000572 [H]
Pfam domain/function: PF00174 Oxidored_molyb [H]
EC number: NA
Molecular weight: Translated: 45357; Mature: 45226
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVASSGGRLGRRQFLSGAAAGLVAGAAGPAAAQQGSGPLQVPVWTREQGEGIASPAYGV CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCC PSAFEKSVIRKPRTPPKFPTAASTGTPLQHLHGIITPAGLHYERHHAGVPAIDPEQHRLV CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEE IHGLVERPLILTMNDIARFPSVSRLWFLECSGNTPQWTGGSAKWTVQETHGLISCSEWTG EEEHHCCCEEEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCC VRLSTLLDEVGLKPEARWVLAEGADGAAMTRSIPLDVVLDEALVAYAQNGEHLRPEQGYP CHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC LRLVLPGIEGNMSIKWLRRLKVGDQPFQSREETSKYTDLMPDGTARQFTFVMETKSVITS EEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCC PSGGHQLREKGFYEIRGLAWSGRGRIRSVDVSTDGGATWRPAELQEPVLSRCLTRFRVPW CCCCHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCE TWDGGPALLQSRAVDETGYVQPSRQQLVDVRGVNSQYHFNGIQTWKVAPSGEVTNAA EECCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECCCCCCCCCC >Mature Secondary Structure SVASSGGRLGRRQFLSGAAAGLVAGAAGPAAAQQGSGPLQVPVWTREQGEGIASPAYGV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCC PSAFEKSVIRKPRTPPKFPTAASTGTPLQHLHGIITPAGLHYERHHAGVPAIDPEQHRLV CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEE IHGLVERPLILTMNDIARFPSVSRLWFLECSGNTPQWTGGSAKWTVQETHGLISCSEWTG EEEHHCCCEEEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCC VRLSTLLDEVGLKPEARWVLAEGADGAAMTRSIPLDVVLDEALVAYAQNGEHLRPEQGYP CHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC LRLVLPGIEGNMSIKWLRRLKVGDQPFQSREETSKYTDLMPDGTARQFTFVMETKSVITS EEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCC PSGGHQLREKGFYEIRGLAWSGRGRIRSVDVSTDGGATWRPAELQEPVLSRCLTRFRVPW CCCCHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCE TWDGGPALLQSRAVDETGYVQPSRQQLVDVRGVNSQYHFNGIQTWKVAPSGEVTNAA EECCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]