| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is merR [C]
Identifier: 158424595
GI number: 158424595
Start: 3395050
End: 3395532
Strand: Direct
Name: merR [C]
Synonym: AZC_2971
Alternate gene names: 158424595
Gene position: 3395050-3395532 (Clockwise)
Preceding gene: 158424590
Following gene: 158424596
Centisome position: 63.23
GC content: 66.46
Gene sequence:
>483_bases ATGGCACTCGATGGATCGCACGGTTCCGACACGCCCGGCGCGTCCGCGCATGGGGCCCTGACGGACACCTTCTTCTCCGT CACCGAACTCGCCCGTGACCTCGCCATCACGCCGCGCACGGTCCGCTTCTATGAGGACAAGGGCCTCATCTCGCCGCGCC GGGCCGGCAACATCCGGGTCTATACCAAGCGCGACCGCGCCCGCATGGTGCTGATCCTGCGCGGCAAGCGGCTCGGCTTC TCGCTGCGCGAGATCAAGGAATATCTCGACCTCTATGATGTCGACCCGACGCAGGTGGAGCAGATCCGCCTGCTGCTGAA GAAGGTGCGCACGCGCCTCGAAATGCTCGAGGATCAGCGCGTGGCGCTGGAGGAGAGCATCGCCGAACTCAAGGACATCG AGGATCAGACCCTGTCCGCCTTGGCGATCGCCGATGCGGCGGAAGCTTCGCCGCGCAAGGCGGCGGGCAAGCGGCGGGGA TGA
Upstream 100 bases:
>100_bases CTGCTATCCAATTTTGTTTGGACACGCGCCTGCCGCCACCCTTGCAGGGCGATGCGAAGCATGTATCCTAGGGTCCGTTA GATGACGTATAGGTCAACCT
Downstream 100 bases:
>100_bases GTCCCGCGGGGCGCCGTCGGGCGCCGGAATAAACAAGAAGACCGAAAGCCGAACGGCATTTTGAAAGCTTGCAGGAGCGC CCATGTCGAACGTCGTCATC
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Mercuric Resistance Operon Regulatory Protein; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; Regulatory Protein; MerR Family Regulatory Family; Transcription Regulator Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MALDGSHGSDTPGASAHGALTDTFFSVTELARDLAITPRTVRFYEDKGLISPRRAGNIRVYTKRDRARMVLILRGKRLGF SLREIKEYLDLYDVDPTQVEQIRLLLKKVRTRLEMLEDQRVALEESIAELKDIEDQTLSALAIADAAEASPRKAAGKRRG
Sequences:
>Translated_160_residues MALDGSHGSDTPGASAHGALTDTFFSVTELARDLAITPRTVRFYEDKGLISPRRAGNIRVYTKRDRARMVLILRGKRLGF SLREIKEYLDLYDVDPTQVEQIRLLLKKVRTRLEMLEDQRVALEESIAELKDIEDQTLSALAIADAAEASPRKAAGKRRG >Mature_159_residues ALDGSHGSDTPGASAHGALTDTFFSVTELARDLAITPRTVRFYEDKGLISPRRAGNIRVYTKRDRARMVLILRGKRLGFS LREIKEYLDLYDVDPTQVEQIRLLLKKVRTRLEMLEDQRVALEESIAELKDIEDQTLSALAIADAAEASPRKAAGKRRG
Specific function: Copper responsive transcription regulator [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17926; Mature: 17795
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDGSHGSDTPGASAHGALTDTFFSVTELARDLAITPRTVRFYEDKGLISPRRAGNIRV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEE YTKRDRARMVLILRGKRLGFSLREIKEYLDLYDVDPTQVEQIRLLLKKVRTRLEMLEDQR EEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VALEESIAELKDIEDQTLSALAIADAAEASPRKAAGKRRG HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCCC >Mature Secondary Structure ALDGSHGSDTPGASAHGALTDTFFSVTELARDLAITPRTVRFYEDKGLISPRRAGNIRV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEE YTKRDRARMVLILRGKRLGFSLREIKEYLDLYDVDPTQVEQIRLLLKKVRTRLEMLEDQR EEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VALEESIAELKDIEDQTLSALAIADAAEASPRKAAGKRRG HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA