| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is matE
Identifier: 158424587
GI number: 158424587
Start: 3384891
End: 3386270
Strand: Direct
Name: matE
Synonym: AZC_2963
Alternate gene names: NA
Gene position: 3384891-3386270 (Clockwise)
Preceding gene: 158424586
Following gene: 158424588
Centisome position: 63.04
GC content: 70.0
Gene sequence:
>1380_bases ATGCGCCATGTGGCGGTCATGACGGGCACCGGCTCGGTGGGGCTGGTCGCCGTGTTCATGGTGGACCTGCTCAACCTCTT CTACATCTCGCTGCTGGGCGAGGCGGAACTGGCGGCGGCCATCGGCTATGCGGGCACGGTGATGTTCTTCGTCACCTCCG TCACCATCGGCCTCATGATCGCGGCCTCCGCCACCGTCTCGCGGGCGCTCGGCGCCGGGCGGCGGCGGGAGGCACGCCAG CGCGCCACCACGGCGGCGGTGCTGATGCTCGCCACCTGCCTCATCCTGACGGCGGTGACGCTGCCGCTGCTGCATCCCCT CCTCCGCCTCCTCGGCGCCACCGGACACACCGCGGCCATTGCGGAGCGCTTCCTGTTCATGGTCACGCTCTCGACGCCGC TGCTCGGCCTCGGCATGGTCGCCTCCGGCGTCCTGCGGGCGACGGGCGATGCCAGCCGCTCCATGTGGGTGACGCTCGGC GGCGGCATCGTCACCGCATTGCTGGACCCGCTGCTGATCCTCGTGCTCCATCTGGGGGTGGATGGCGCGGCCTATGCGAG CTCGGCCTCCCGCCTCTTCATGGCCATCGCCGGCCTCTACTGGTGCGGCAAGCACCATCGCCTGCTGACGCGGCCGACCC GGCGGATGATCGCCGAGAACTTCCGTCCCATCGCGTCCATCGCCTGGCCGGCCATCCTCACCAATGTGGCCACCCCGGTG GGCAATGCCTATGTCACTTCCGCCCTCGCCCCCTTCGGCGACGAGGCGGTGGCGGCCTGGGCGGTGATCGGGCGCGTCAT CCCCGTGGCGTTCGGGCCGCTGTTCGCGCTGACTGGGGCTGTCGGCCCCATCTTCGGCCAGAATCTCGGTGCCGGCCGCT ACGACCGGCTGCGCACCACCTTGCGTGACAGCCTGCTGCTGATCCTCTGCTACGTCCTGCTCGTCTGGCTGGCCATGGCG CTCGGCCGCGGTTCCATCGCCTCCGGTTTCGGGCTGACAGATGCGGGACGCGGCATCGTGGAGTTCTTCTGCCTCGTCTC GGCGGGCAGCTTCATGTTCCTCGGTGCCCTGTTCGTCTCCAACGCCGCCTTCAACAATCTCGGCGCGCCCCTGTTTTCCA CGCTGTTCAACTGGGGCCGGGCGACACTCGGCACGGTGCCCTTCGCCTGGGCGGGGGGACAGCTCATGGGGCCGAACGGG GTCATCCTCGGACAGAGCCTCGGCGCCGTGGCCTTCGGGCTCGCGGGCATGGTGTTCGCGTTCCGGCTCATCGAGAAGAT CGGTCGTTCAGGTGCGCCGGCTGCGCCCGGCCGCCACCCGGCGCCAGCGGAAATGCCGCCTTTGTCCTCGCCGCAGGATG CGGCGGCCATCGACCCGTGA
Upstream 100 bases:
>100_bases GGATCGGGCGCGTTCAGCCTGATCGCATCCGGAACTCGCCCCCGCCCGCTCCAAGGTTCCCATGGCCCGTTCCCATCCCA CCTTCACCCACGGTTCCATC
Downstream 100 bases:
>100_bases TTTTGGCGCTGTGATGGCGTAGGGTCTCCTTCAGGGGAGGCCATACATGGATCAGTTCACCCAGTTGCTGAAGTCCGCCC AAGGCGGGCACGGCGTCGAG
Product: multi anti extrusion protein
Products: NA
Alternate protein names: ORF 1 [H]
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMIAASATVSRALGAGRRREARQ RATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAIAERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLG GGIVTALLDPLLILVLHLGVDGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTTLRDSLLLILCYVLLVWLAMA LGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVSNAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNG VILGQSLGAVAFGLAGMVFAFRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP
Sequences:
>Translated_459_residues MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMIAASATVSRALGAGRRREARQ RATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAIAERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLG GGIVTALLDPLLILVLHLGVDGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTTLRDSLLLILCYVLLVWLAMA LGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVSNAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNG VILGQSLGAVAFGLAGMVFAFRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP >Mature_459_residues MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMIAASATVSRALGAGRRREARQ RATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAIAERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLG GGIVTALLDPLLILVLHLGVDGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTTLRDSLLLILCYVLLVWLAMA LGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVSNAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNG VILGQSLGAVAFGLAGMVFAFRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP
Specific function: May be a membrane-bound protein, possibly involved in IAA or IAA-Lysine transport [H]
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002528 - InterPro: IPR015522 [H]
Pfam domain/function: PF01554 MatE [H]
EC number: NA
Molecular weight: Translated: 47678; Mature: 47678
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMI CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH AASATVSRALGAGRRREARQRATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLGGGIVTALLDPLLILVLHLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC DGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTT CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LRDSLLLILCYVLLVWLAMALGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH NAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNGVILGQSLGAVAFGLAGMVFA HHHHHHCCHHHHHHHHHHCCHHHCCCCCEECCCEEECCCCEEECCHHHHHHHHHHHHHHH FRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMI CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH AASATVSRALGAGRRREARQRATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLGGGIVTALLDPLLILVLHLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC DGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTT CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LRDSLLLILCYVLLVWLAMALGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH NAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNGVILGQSLGAVAFGLAGMVFA HHHHHHCCHHHHHHHHHHCCHHHCCCCCEECCCEEECCCCEEECCHHHHHHHHHHHHHHH FRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2377619 [H]