| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424572
Identifier: 158424572
GI number: 158424572
Start: 3369962
End: 3370978
Strand: Direct
Name: 158424572
Synonym: AZC_2948
Alternate gene names: NA
Gene position: 3369962-3370978 (Clockwise)
Preceding gene: 158424571
Following gene: 158424574
Centisome position: 62.76
GC content: 69.62
Gene sequence:
>1017_bases ATGGCCGCTTTATCCGACCTCCTGTTCCAAGCCGTACCCGGGCCTGTGCTGCGGGCGATGGTGGCCGCGCGCTTCGGAAC CGTGGTGCCCGCCGGACGCCGGGTCTGGGTGAATGCCGGTGCCGGCCGCGAGGACGGCCTCTCCTTCGAGAATGACGGGC GCTGGCTGGTGGCGACCGCCGGCGGCGAGCTCCTGAAGCGCGACCGCATCAACAGCCTCTGGAAGCGCGGCGCCATCATG GCCTATTTCGCCTCCCGCTCGAATGCGGACGCGCTGGAGACGAGCCTCGCCGACCACAGCGCCACGCCCCGCGTCCTCAC ATTCTGCTCCAACCATCCCGACGCCGTTCTGGTGCCAGATCGCTCCTTCATGACGCCGCGCATCTATGCGCCCTATCGGG CCATCGCCCATAGCGTGCCATGGGCGGAGCGCGAGGACGTGGTGCGCTGGCGTGGGGCGCCGTCCGGCCAGGGCGAGATC GCCCACAGCTGGATGGACGCCGGCAACCCCATGCTGCGCCAGCGGGTGCGCATGTGCCTCGCGCTCCGCGACGAGCCGGG CGTGGACGTCGCCTTCGCCGGCCGGGCCGACCTCGCGCCCTATGGCATCAGCAAGGAGCGCCTCGATCCGCTGAGCTGGG CCAAGGTGCGCTATGCCATCGACATCGACGGCTTCTCCGCCGCCTGGATGAACTTCTTCTCGCGCCTGCTGCTCGGCTGC TGCGTCATCAAGGTCGCCTCGCCCTATGGCTTCCGACAGTGGTTCTATGACGCGCTGGTGCCGTGGATCCATTATGTGCC GGTGAAGGCGGACCTCTCCGACCTCAAGGAGAAGATCGCCTGGTGCCGGGCCAATCCCGATGCCTGCCGGCAGATCGCCG AGGAGGGCCAGCGCCTTGCCCTCTCGCGCACGGTCGAGAGCGAGACCCAGCTGACGCTCGCCCGCATCGACGCAGCGCTC GGCGCGCGCAACGCGGCCAAGGCGCCCAACCCGCGCCTGCGGGACGCCAGTTCCTGA
Upstream 100 bases:
>100_bases GAGCGGTTCGAATTCCGCGACGGCAGGCCCATCACGTTCGCGCCGTGGAGCATTTGCCCCCTACCGGACAGGGGGGTATT GGCCTTATAAGCCCTAGCCG
Downstream 100 bases:
>100_bases TCGAGATCCTCAGCCGAGCGTGCTGAGGATGGGGAAGGTTTCGAGCAGCCAGTAGCTCATGCTGGCGATGCCGCCGGACA GGAAGGCGATGCCCGTGAGC
Product: lipopolysaccharide-modifying enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAALSDLLFQAVPGPVLRAMVAARFGTVVPAGRRVWVNAGAGREDGLSFENDGRWLVATAGGELLKRDRINSLWKRGAIM AYFASRSNADALETSLADHSATPRVLTFCSNHPDAVLVPDRSFMTPRIYAPYRAIAHSVPWAEREDVVRWRGAPSGQGEI AHSWMDAGNPMLRQRVRMCLALRDEPGVDVAFAGRADLAPYGISKERLDPLSWAKVRYAIDIDGFSAAWMNFFSRLLLGC CVIKVASPYGFRQWFYDALVPWIHYVPVKADLSDLKEKIAWCRANPDACRQIAEEGQRLALSRTVESETQLTLARIDAAL GARNAAKAPNPRLRDASS
Sequences:
>Translated_338_residues MAALSDLLFQAVPGPVLRAMVAARFGTVVPAGRRVWVNAGAGREDGLSFENDGRWLVATAGGELLKRDRINSLWKRGAIM AYFASRSNADALETSLADHSATPRVLTFCSNHPDAVLVPDRSFMTPRIYAPYRAIAHSVPWAEREDVVRWRGAPSGQGEI AHSWMDAGNPMLRQRVRMCLALRDEPGVDVAFAGRADLAPYGISKERLDPLSWAKVRYAIDIDGFSAAWMNFFSRLLLGC CVIKVASPYGFRQWFYDALVPWIHYVPVKADLSDLKEKIAWCRANPDACRQIAEEGQRLALSRTVESETQLTLARIDAAL GARNAAKAPNPRLRDASS >Mature_337_residues AALSDLLFQAVPGPVLRAMVAARFGTVVPAGRRVWVNAGAGREDGLSFENDGRWLVATAGGELLKRDRINSLWKRGAIMA YFASRSNADALETSLADHSATPRVLTFCSNHPDAVLVPDRSFMTPRIYAPYRAIAHSVPWAEREDVVRWRGAPSGQGEIA HSWMDAGNPMLRQRVRMCLALRDEPGVDVAFAGRADLAPYGISKERLDPLSWAKVRYAIDIDGFSAAWMNFFSRLLLGCC VIKVASPYGFRQWFYDALVPWIHYVPVKADLSDLKEKIAWCRANPDACRQIAEEGQRLALSRTVESETQLTLARIDAALG ARNAAKAPNPRLRDASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI153218487, Length=91, Percent_Identity=42.8571428571429, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI176866369, Length=167, Percent_Identity=31.1377245508982, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37340; Mature: 37209
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALSDLLFQAVPGPVLRAMVAARFGTVVPAGRRVWVNAGAGREDGLSFENDGRWLVATA CCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEC GGELLKRDRINSLWKRGAIMAYFASRSNADALETSLADHSATPRVLTFCSNHPDAVLVPD CHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEECC RSFMTPRIYAPYRAIAHSVPWAEREDVVRWRGAPSGQGEIAHSWMDAGNPMLRQRVRMCL CCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH ALRDEPGVDVAFAGRADLAPYGISKERLDPLSWAKVRYAIDIDGFSAAWMNFFSRLLLGC HHCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHH CVIKVASPYGFRQWFYDALVPWIHYVPVKADLSDLKEKIAWCRANPDACRQIAEEGQRLA HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEE LSRTVESETQLTLARIDAALGARNAAKAPNPRLRDASS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AALSDLLFQAVPGPVLRAMVAARFGTVVPAGRRVWVNAGAGREDGLSFENDGRWLVATA CHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEC GGELLKRDRINSLWKRGAIMAYFASRSNADALETSLADHSATPRVLTFCSNHPDAVLVPD CHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEECC RSFMTPRIYAPYRAIAHSVPWAEREDVVRWRGAPSGQGEIAHSWMDAGNPMLRQRVRMCL CCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH ALRDEPGVDVAFAGRADLAPYGISKERLDPLSWAKVRYAIDIDGFSAAWMNFFSRLLLGC HHCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHH CVIKVASPYGFRQWFYDALVPWIHYVPVKADLSDLKEKIAWCRANPDACRQIAEEGQRLA HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEE LSRTVESETQLTLARIDAALGARNAAKAPNPRLRDASS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA