| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424560
Identifier: 158424560
GI number: 158424560
Start: 3357276
End: 3358103
Strand: Reverse
Name: 158424560
Synonym: AZC_2936
Alternate gene names: NA
Gene position: 3358103-3357276 (Counterclockwise)
Preceding gene: 158424561
Following gene: 158424559
Centisome position: 62.54
GC content: 69.08
Gene sequence:
>828_bases ATGGCGTCGGAATCCATTCCTGAACTCATCGAGTTCGTCCTGGCATTGCTTGCCCTGGGCGCACTCGCCGGGTTGCTCGT GGGGCTATTTGGAGCCTATGGCGGTCTGGTGATCGTCCCGGTTCTGCACCCGCTCCTCACGACGCTCGGCATGCACAACA GCCTGGTCGTCCATGTGGCGACGGGCATTTCCCTGGCTCTGGTCGCGGTGACGGGGCTGCGCCTCTGGCGAGGGCGGCGG GCCGCCCGGTCCGGTCGCGGTCTGGCGCCGGGAGGCTGGCTCTGGGCGGTATCCGCCGCGGCGGTCGCCGCAAGCGTCGT CGTATCCGCCCTGCCGTCAGGAGAGATGGAACTCGTCTTCACCATCGCCGTCCTCGCGGGTGCGGTGAAGATGCTGTTTC TCGGCCACATCTCGGCGCCCTCCGGCGCCCGGCTGGTGGCTGCGGGCGGCGGCGGTGCCGCCACACTCTCGGATGACGGT TTCTCCGATCTGGAAAGCAGCCTCGGCGGGGCGTTTCACAAGCTGCGCGATGCCTGGGCGGGAGCCGGGCGCATGATGGC CGACCCGCTGGCCGTGTGCGCTGTGCTCGCCGTCCCCGGCCTGTTCGGCCTCGCCGCGGCGGTTTTCGGGGACCCGCAGT TCCCCGCCGCCAGTGCCGATTTCATGCAGGTGTTCGGCGTCGCCGTCATCCTCGTCACCGCCGTGGGGCTGGCGCCCCTC GGGGCGGCCCTGTCCGGCCAGTTTCCCAAGCGCGTGCTGGAAGTGAGCCTTGGCGTTTTCCTGCTGATGCTGGCCGGCGA ATTCGCCTACACACTGCTGATGTCCTGA
Upstream 100 bases:
>100_bases ACTGGCTAAGGTCATGTATACCAGCTAAATTTGTTAAAAAATCGTGGTTTTATTCCACTAATGCGTCATATGGTTCCCTT CGCGCCTCAAGGGGGGTCTT
Downstream 100 bases:
>100_bases AGCGAGCCGCCGGCCGGGACAAACCACCCGGCCGGCGCTCGGCCCGGACTGAAGAAGCGCTTCCGGCGCGCCGCGAGCCG CAGTACATCTGTGTCATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MASESIPELIEFVLALLALGALAGLLVGLFGAYGGLVIVPVLHPLLTTLGMHNSLVVHVATGISLALVAVTGLRLWRGRR AARSGRGLAPGGWLWAVSAAAVAASVVVSALPSGEMELVFTIAVLAGAVKMLFLGHISAPSGARLVAAGGGGAATLSDDG FSDLESSLGGAFHKLRDAWAGAGRMMADPLAVCAVLAVPGLFGLAAAVFGDPQFPAASADFMQVFGVAVILVTAVGLAPL GAALSGQFPKRVLEVSLGVFLLMLAGEFAYTLLMS
Sequences:
>Translated_275_residues MASESIPELIEFVLALLALGALAGLLVGLFGAYGGLVIVPVLHPLLTTLGMHNSLVVHVATGISLALVAVTGLRLWRGRR AARSGRGLAPGGWLWAVSAAAVAASVVVSALPSGEMELVFTIAVLAGAVKMLFLGHISAPSGARLVAAGGGGAATLSDDG FSDLESSLGGAFHKLRDAWAGAGRMMADPLAVCAVLAVPGLFGLAAAVFGDPQFPAASADFMQVFGVAVILVTAVGLAPL GAALSGQFPKRVLEVSLGVFLLMLAGEFAYTLLMS >Mature_274_residues ASESIPELIEFVLALLALGALAGLLVGLFGAYGGLVIVPVLHPLLTTLGMHNSLVVHVATGISLALVAVTGLRLWRGRRA ARSGRGLAPGGWLWAVSAAAVAASVVVSALPSGEMELVFTIAVLAGAVKMLFLGHISAPSGARLVAAGGGGAATLSDDGF SDLESSLGGAFHKLRDAWAGAGRMMADPLAVCAVLAVPGLFGLAAAVFGDPQFPAASADFMQVFGVAVILVTAVGLAPLG AALSGQFPKRVLEVSLGVFLLMLAGEFAYTLLMS
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27639; Mature: 27508
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASESIPELIEFVLALLALGALAGLLVGLFGAYGGLVIVPVLHPLLTTLGMHNSLVVHVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEHH TGISLALVAVTGLRLWRGRRAARSGRGLAPGGWLWAVSAAAVAASVVVSALPSGEMELVF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TIAVLAGAVKMLFLGHISAPSGARLVAAGGGGAATLSDDGFSDLESSLGGAFHKLRDAWA HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GAGRMMADPLAVCAVLAVPGLFGLAAAVFGDPQFPAASADFMQVFGVAVILVTAVGLAPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GAALSGQFPKRVLEVSLGVFLLMLAGEFAYTLLMS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASESIPELIEFVLALLALGALAGLLVGLFGAYGGLVIVPVLHPLLTTLGMHNSLVVHVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEHH TGISLALVAVTGLRLWRGRRAARSGRGLAPGGWLWAVSAAAVAASVVVSALPSGEMELVF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TIAVLAGAVKMLFLGHISAPSGARLVAAGGGGAATLSDDGFSDLESSLGGAFHKLRDAWA HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GAGRMMADPLAVCAVLAVPGLFGLAAAVFGDPQFPAASADFMQVFGVAVILVTAVGLAPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GAALSGQFPKRVLEVSLGVFLLMLAGEFAYTLLMS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA