Click here to switch to the map view.

The map label for this gene is marR

Identifier: 158424536

GI number: 158424536

Start: 3324793

End: 3325464

Strand: Direct

Name: marR

Synonym: AZC_2912

Alternate gene names: NA

Gene position: 3324793-3325464 (Clockwise)

Preceding gene: 158424530

Following gene: 158424537

Centisome position: 61.92

GC content: 61.76

Gene sequence:

>672_bases
TTGCAGTCGCGAAAATGGTTTCGTTTGAAACTTGTTAAGCAGATTGACAGGGCTCAAAACCTTCTGTCAAGTTTCACGAT
GAACCAACTTGAGAAGGGCCGGCCACGCCGGTCCGAGGGCGGGGAGAGGATGCACGCGCCGCAACTGCCGCCGAGCGCGG
CGGAGGAGGATCTGCCGGGAGATGTTGATCCGCTGATCGCCATCAAGCTGTGGCGCAATCCCTGCTGGTTTTCCTTCCGC
ATCAACTACCTGTCCATGAACTTCAACGTTCCGGTCTATGGCTGGACGGAGAAGACCTTCGGCCTGCCGCGGCCGGAATT
CGTGGTGCTCTATGCGCTCGGCCTGAAGGGCGGGGTGGCGGCGAAGGACATCTGCTCCTCCAGCGGCTTCCCCAAGCCCA
CCATCAGCCGGGCCATCCAGAGCCTGCTGAAGCGCAAGCTCGTCCGGCGCGACACCGACCCCAAGGATCACCGCAGCTAC
GTGCTGAACATCACCGACGACGGCCAGAGCATCTTCGATGCCAGCATGCCGGTGATGCTGGAGCGCGAGCGGGTGATGCT
GGCGCGGCTCAGCCCGGGCGAGCGCGCGATGTTGTTCGAGATCCTCGCCAAGATGGTGGTGGATTCTCCCGAGTGGCCCC
AGACAATCGAAACAGAGGATACCCTGCCGTGA

Upstream 100 bases:

>100_bases
TCGTCGGCGCGGACCCGCGCCTCCATCTGCATCCAGTTCATGCCGGCAACGCGCATCAGCCCCCCGCAAGCACGGCCATG
CCGCCCTGCAAAACCACAGT

Downstream 100 bases:

>100_bases
CGCTCGCCTCGACGTTCCGAACCCTGTCGCTTGCCGCCCTCCTCGCCACCACGGCATCGGGCGCCCTGTTCGCGCAGACG
CTGACCATCGGCGTGCGTTC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; MarR/EmrR Family Transcriptional Regulator; Transcriptional Regulator MarR/EmrR Family; Sugar-Specific Transcriptional Regulator TrmB Family; Transcriptional Regulator MarR Family

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQSRKWFRLKLVKQIDRAQNLLSSFTMNQLEKGRPRRSEGGERMHAPQLPPSAAEEDLPGDVDPLIAIKLWRNPCWFSFR
INYLSMNFNVPVYGWTEKTFGLPRPEFVVLYALGLKGGVAAKDICSSSGFPKPTISRAIQSLLKRKLVRRDTDPKDHRSY
VLNITDDGQSIFDASMPVMLERERVMLARLSPGERAMLFEILAKMVVDSPEWPQTIETEDTLP

Sequences:

>Translated_223_residues
MQSRKWFRLKLVKQIDRAQNLLSSFTMNQLEKGRPRRSEGGERMHAPQLPPSAAEEDLPGDVDPLIAIKLWRNPCWFSFR
INYLSMNFNVPVYGWTEKTFGLPRPEFVVLYALGLKGGVAAKDICSSSGFPKPTISRAIQSLLKRKLVRRDTDPKDHRSY
VLNITDDGQSIFDASMPVMLERERVMLARLSPGERAMLFEILAKMVVDSPEWPQTIETEDTLP
>Mature_223_residues
MQSRKWFRLKLVKQIDRAQNLLSSFTMNQLEKGRPRRSEGGERMHAPQLPPSAAEEDLPGDVDPLIAIKLWRNPCWFSFR
INYLSMNFNVPVYGWTEKTFGLPRPEFVVLYALGLKGGVAAKDICSSSGFPKPTISRAIQSLLKRKLVRRDTDPKDHRSY
VLNITDDGQSIFDASMPVMLERERVMLARLSPGERAMLFEILAKMVVDSPEWPQTIETEDTLP

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25493; Mature: 25493

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRKWFRLKLVKQIDRAQNLLSSFTMNQLEKGRPRRSEGGERMHAPQLPPSAAEEDLPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DVDPLIAIKLWRNPCWFSFRINYLSMNFNVPVYGWTEKTFGLPRPEFVVLYALGLKGGVA
CCCCEEEEEEECCCCEEEEEEEEEEEECCCCEECCCHHHCCCCCCCEEEEEEECCCCCCH
AKDICSSSGFPKPTISRAIQSLLKRKLVRRDTDPKDHRSYVLNITDDGQSIFDASMPVML
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCEEE
ERERVMLARLSPGERAMLFEILAKMVVDSPEWPQTIETEDTLP
HHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSRKWFRLKLVKQIDRAQNLLSSFTMNQLEKGRPRRSEGGERMHAPQLPPSAAEEDLPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DVDPLIAIKLWRNPCWFSFRINYLSMNFNVPVYGWTEKTFGLPRPEFVVLYALGLKGGVA
CCCCEEEEEEECCCCEEEEEEEEEEEECCCCEECCCHHHCCCCCCCEEEEEEECCCCCCH
AKDICSSSGFPKPTISRAIQSLLKRKLVRRDTDPKDHRSYVLNITDDGQSIFDASMPVML
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCEEE
ERERVMLARLSPGERAMLFEILAKMVVDSPEWPQTIETEDTLP
HHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA