| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424465
Identifier: 158424465
GI number: 158424465
Start: 3234612
End: 3235322
Strand: Direct
Name: 158424465
Synonym: AZC_2841
Alternate gene names: NA
Gene position: 3234612-3235322 (Clockwise)
Preceding gene: 158424463
Following gene: 158424466
Centisome position: 60.24
GC content: 65.82
Gene sequence:
>711_bases ATGAAGATCACCTGGCTCGGCCATGCCGCCTTCCGCCTCGATTTCGCCGGCACGGCGGTGCTCATCGACCCCTTCCTCAC CCACAATCCGGTCTTCAAGGGCGATGTGGCGGAGGTCTCGAAGGGCGTCAGCCACATCCTTCTCACCCATGGCCATTCCG ACCATATCGGCGACACGGCTGGCATCGTGAAGGCGGCCGAGGCGGAGGGGCGCAAGGTCATCGTGGTGGCCAATCCCGAA GTGTGCGGCTTCCTGAGCGGACAGGGTCTGTCTGCCTTCGAGCCCATGAACACCGGCGGCACGGTGAAGCTCGACGGCTT CTCCGTCACCATGGTGCGGGCGGACCATTCCTCGGGCGGCGATGGCTCGAACCCCACCTATCTCGGCAATCCCAACGGCC TCATCGTGAAGGCGGCGGGCGAACCGACGCTCTGGCATCTGGGCGACACGGACCTGTTCTCCGACATGGCCCTCATCAGC GAAATCCATCAGCCGAAGGTGGCCATCGTGCCCATTGGCGACCGCTTCACCATGGGGCCGGAGACGGCGGCGCTGGCGGT GCGGCGCTTCATTTCGGCCGAGACGGTGGTGCCCTGCCACTACGGCACCTTCCCCCTGTTGGTGCCGGATGCCTCGGGCT TCGTCGCCGCCCTTCAGGGCCACAGCGCCAAGGTGGTGGTGCCGAACAGCGGGGAAAGCTTCGAGGTCTGA
Upstream 100 bases:
>100_bases ACCACAGGAGCGGCGGGTGCGTTGCGGGCGCGGGGCCCTTCACCGATACTCCGCCGCCATTCGATCCCTCCCTTGCGTCT TCATCCGAAAGGGCTTTCCC
Downstream 100 bases:
>100_bases GCCTCCTCACCCCCCGCCCGGTGTCGCGATGCGTTGCCCGCGCGCCGGGCGGGAGTATAAGGGGCCATGCTCCCCGTTCT GCCGCTTGAGTCGCACTCCG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKITWLGHAAFRLDFAGTAVLIDPFLTHNPVFKGDVAEVSKGVSHILLTHGHSDHIGDTAGIVKAAEAEGRKVIVVANPE VCGFLSGQGLSAFEPMNTGGTVKLDGFSVTMVRADHSSGGDGSNPTYLGNPNGLIVKAAGEPTLWHLGDTDLFSDMALIS EIHQPKVAIVPIGDRFTMGPETAALAVRRFISAETVVPCHYGTFPLLVPDASGFVAALQGHSAKVVVPNSGESFEV
Sequences:
>Translated_236_residues MKITWLGHAAFRLDFAGTAVLIDPFLTHNPVFKGDVAEVSKGVSHILLTHGHSDHIGDTAGIVKAAEAEGRKVIVVANPE VCGFLSGQGLSAFEPMNTGGTVKLDGFSVTMVRADHSSGGDGSNPTYLGNPNGLIVKAAGEPTLWHLGDTDLFSDMALIS EIHQPKVAIVPIGDRFTMGPETAALAVRRFISAETVVPCHYGTFPLLVPDASGFVAALQGHSAKVVVPNSGESFEV >Mature_236_residues MKITWLGHAAFRLDFAGTAVLIDPFLTHNPVFKGDVAEVSKGVSHILLTHGHSDHIGDTAGIVKAAEAEGRKVIVVANPE VCGFLSGQGLSAFEPMNTGGTVKLDGFSVTMVRADHSSGGDGSNPTYLGNPNGLIVKAAGEPTLWHLGDTDLFSDMALIS EIHQPKVAIVPIGDRFTMGPETAALAVRRFISAETVVPCHYGTFPLLVPDASGFVAALQGHSAKVVVPNSGESFEV
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2841_AZOC5 (A8I9W7)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001525757.1 - ProteinModelPortal: A8I9W7 - GeneID: 5691169 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_2841 - HOGENOM: HBG741314 - OMA: FPIIDQT - ProtClustDB: CLSK980082 - BioCyc: ACAU438753:AZC_2841-MONOMER - HAMAP: MF_00457 - InterPro: IPR001279 - InterPro: IPR022877 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 24693; Mature: 24693
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITWLGHAAFRLDFAGTAVLIDPFLTHNPVFKGDVAEVSKGVSHILLTHGHSDHIGDTA CEEEEEECEEEEEECCCCEEEEECHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCH GIVKAAEAEGRKVIVVANPEVCGFLSGQGLSAFEPMNTGGTVKLDGFSVTMVRADHSSGG HEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCC DGSNPTYLGNPNGLIVKAAGEPTLWHLGDTDLFSDMALISEIHQPKVAIVPIGDRFTMGP CCCCCCEEECCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCEECCC ETAALAVRRFISAETVVPCHYGTFPLLVPDASGFVAALQGHSAKVVVPNSGESFEV HHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCCCC >Mature Secondary Structure MKITWLGHAAFRLDFAGTAVLIDPFLTHNPVFKGDVAEVSKGVSHILLTHGHSDHIGDTA CEEEEEECEEEEEECCCCEEEEECHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCH GIVKAAEAEGRKVIVVANPEVCGFLSGQGLSAFEPMNTGGTVKLDGFSVTMVRADHSSGG HEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCC DGSNPTYLGNPNGLIVKAAGEPTLWHLGDTDLFSDMALISEIHQPKVAIVPIGDRFTMGP CCCCCCEEECCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCEECCC ETAALAVRRFISAETVVPCHYGTFPLLVPDASGFVAALQGHSAKVVVPNSGESFEV HHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA