| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is pimA [H]
Identifier: 158424382
GI number: 158424382
Start: 3135514
End: 3136572
Strand: Direct
Name: pimA [H]
Synonym: AZC_2758
Alternate gene names: 158424382
Gene position: 3135514-3136572 (Clockwise)
Preceding gene: 158424378
Following gene: 158424386
Centisome position: 58.39
GC content: 66.86
Gene sequence:
>1059_bases ATGAAAATCGCACAAATCGCTCCGCTGACCGAAGCCGTGCCGCCCACGCTGTATGGTGGCACCGAACGTGTGGTGTCGTG GCTGACGGAAGAACTGGTGGCCCTCGGCCATGAGGTGACGCTGTTCGCCAGCGGGGATTCCCGCACGTCCGCGCGGCTGG AGGCCATGTGGCCCCGCGCCCTGCGCCTAGACGGAACCGTCCGGGACCCCAATGCCCTGCATATGGCGATGATCGAGCAC GTCTATCGCCGGGCGGGCGAGTTCGACATCATGCACTTCCACCTCGACTATTACCCCTTCTCGCTGATGTCGCGGCAGCC GACGCCCTTCGTCACGACGCTGCACGGGCGTCTGGACCTGCCGGAGCACCAGCCCCTGTTCCAGACCTTCTCCTCCCTGC CGGTGGTCTCCATCTCGGACGCCCAGCGCCGCCCCGTGCCCAATGCCAATTGGGTGGAGACCGTCCATCACGGCCTGCCG GTGGACCTGCTGGGGCCAAAGCCGGCCGAGCCGCGCTATCTCGCTTTCCTCGGCCGCATCTCGCCGGAGAAGCGGCTCGA CCGCGCCATCCGCATCGCCCAGCGCTGCGGCCTGCCGCTGAAGGTGGCGGCCAAGATCGACCGCGCCGACGAGGACTATT TCAACGACCAGATCCGCCCCCTGATGGGCGACCCGAACATCGAATTCGTCGGTGAGATCGGCGATGCGGAGAAGCCCGAA TTCCTGAGCGGCGCCATCGCCCTGCTCGTCCCCATCGACTGGCCCGAGCCCTTCGGCCTCGTGATGATCGAGGCCATGGC CTGCGGCACGCCCGTCATCGCCTATAACCGCGGCTCCGTGCCGGAGTTGATCGAGGATGGCATCACCGGGTTCATCGTCG AAGACGAGATCAGCGCGGCCGGGGCCATCCGGGATCTGCCGGCCATCTCGCGCGAGGGCGTACGACGGCGCTTCGAGCAG CGCTTCACGTCGCGCCGCATGGCTGAACAATATCTCAGCCTCTACCGACGCCTCATGGACCGGGGCCGCATGCGACCCCA TCTTGTCTCCGCGGGCTGA
Upstream 100 bases:
>100_bases GCCTTCCCGTTCTGCGTTTCCCCAATGGCAGCCCTGACCGGTCGTGGTCGCCGATTTTCCAGCGTGCCGTGACCTTAACT TTGTCGAAGGGCTTTCGTTC
Downstream 100 bases:
>100_bases GAACGATCCGAGGGGAGCCCGAGCGGCTCCCCTTTTGTTTGTGGATCAGGCCGCCTCGGGCGTGCGGTCGCGCGTCTCCG GCATCAGCATCGCGACGCCC
Product: glycosyltransferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKIAQIAPLTEAVPPTLYGGTERVVSWLTEELVALGHEVTLFASGDSRTSARLEAMWPRALRLDGTVRDPNALHMAMIEH VYRRAGEFDIMHFHLDYYPFSLMSRQPTPFVTTLHGRLDLPEHQPLFQTFSSLPVVSISDAQRRPVPNANWVETVHHGLP VDLLGPKPAEPRYLAFLGRISPEKRLDRAIRIAQRCGLPLKVAAKIDRADEDYFNDQIRPLMGDPNIEFVGEIGDAEKPE FLSGAIALLVPIDWPEPFGLVMIEAMACGTPVIAYNRGSVPELIEDGITGFIVEDEISAAGAIRDLPAISREGVRRRFEQ RFTSRRMAEQYLSLYRRLMDRGRMRPHLVSAG
Sequences:
>Translated_352_residues MKIAQIAPLTEAVPPTLYGGTERVVSWLTEELVALGHEVTLFASGDSRTSARLEAMWPRALRLDGTVRDPNALHMAMIEH VYRRAGEFDIMHFHLDYYPFSLMSRQPTPFVTTLHGRLDLPEHQPLFQTFSSLPVVSISDAQRRPVPNANWVETVHHGLP VDLLGPKPAEPRYLAFLGRISPEKRLDRAIRIAQRCGLPLKVAAKIDRADEDYFNDQIRPLMGDPNIEFVGEIGDAEKPE FLSGAIALLVPIDWPEPFGLVMIEAMACGTPVIAYNRGSVPELIEDGITGFIVEDEISAAGAIRDLPAISREGVRRRFEQ RFTSRRMAEQYLSLYRRLMDRGRMRPHLVSAG >Mature_352_residues MKIAQIAPLTEAVPPTLYGGTERVVSWLTEELVALGHEVTLFASGDSRTSARLEAMWPRALRLDGTVRDPNALHMAMIEH VYRRAGEFDIMHFHLDYYPFSLMSRQPTPFVTTLHGRLDLPEHQPLFQTFSSLPVVSISDAQRRPVPNANWVETVHHGLP VDLLGPKPAEPRYLAFLGRISPEKRLDRAIRIAQRCGLPLKVAAKIDRADEDYFNDQIRPLMGDPNIEFVGEIGDAEKPE FLSGAIALLVPIDWPEPFGLVMIEAMACGTPVIAYNRGSVPELIEDGITGFIVEDEISAAGAIRDLPAISREGVRRRFEQ RFTSRRMAEQYLSLYRRLMDRGRMRPHLVSAG
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 39555; Mature: 39555
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAQIAPLTEAVPPTLYGGTERVVSWLTEELVALGHEVTLFASGDSRTSARLEAMWPRA CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCHH LRLDGTVRDPNALHMAMIEHVYRRAGEFDIMHFHLDYYPFSLMSRQPTPFVTTLHGRLDL EECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHCCCCCCEEEEECCCCCC PEHQPLFQTFSSLPVVSISDAQRRPVPNANWVETVHHGLPVDLLGPKPAEPRYLAFLGRI CCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCHHHHHHHCC SPEKRLDRAIRIAQRCGLPLKVAAKIDRADEDYFNDQIRPLMGDPNIEFVGEIGDAEKPE CHHHHHHHHHHHHHHCCCCEEEHHHCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCH FLSGAIALLVPIDWPEPFGLVMIEAMACGTPVIAYNRGSVPELIEDGITGFIVEDEISAA HHCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCEEEEECCHHHH GAIRDLPAISREGVRRRFEQRFTSRRMAEQYLSLYRRLMDRGRMRPHLVSAG HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC >Mature Secondary Structure MKIAQIAPLTEAVPPTLYGGTERVVSWLTEELVALGHEVTLFASGDSRTSARLEAMWPRA CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCHH LRLDGTVRDPNALHMAMIEHVYRRAGEFDIMHFHLDYYPFSLMSRQPTPFVTTLHGRLDL EECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHCCCCCCEEEEECCCCCC PEHQPLFQTFSSLPVVSISDAQRRPVPNANWVETVHHGLPVDLLGPKPAEPRYLAFLGRI CCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCHHHHHHHCC SPEKRLDRAIRIAQRCGLPLKVAAKIDRADEDYFNDQIRPLMGDPNIEFVGEIGDAEKPE CHHHHHHHHHHHHHHCCCCEEEHHHCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCH FLSGAIALLVPIDWPEPFGLVMIEAMACGTPVIAYNRGSVPELIEDGITGFIVEDEISAA HHCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCEEEEECCHHHH GAIRDLPAISREGVRRRFEQRFTSRRMAEQYLSLYRRLMDRGRMRPHLVSAG HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12068013 [H]