| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424365
Identifier: 158424365
GI number: 158424365
Start: 3111950
End: 3112624
Strand: Direct
Name: 158424365
Synonym: AZC_2741
Alternate gene names: NA
Gene position: 3111950-3112624 (Clockwise)
Preceding gene: 158424363
Following gene: 158424366
Centisome position: 57.95
GC content: 69.04
Gene sequence:
>675_bases ATGCCTCTTCGTTTCGGCATCCTTGCCTTTCCTGATGTCCAGCAGTTGGACCTGACCGGCCCCTATGAGGTGTTCGCCTC GGCGCCCGAGACCGAAGTGCTGCTGATCGGCCGCGAGCGCGCGCCTGTCATTGCCTCCACTGGCCTGCCGCTGGTGCCCA CCGCCACCTATGCGGACTGCCCGCCCCTTGATGTGCTGTGCGTGCCCGGTGGCGCGGGGGTGAATGCGCTCATGGAGGAC GCGGACGCGCTCGATTTCATCCGCAGCCGCGCGGGCGAGGTGCGCTATCTCACTTCCGTCTGCACCGGCTCTCTGGTGCT GGGCGCCGCCGGTCTCCTGAAGGGCAAGCGCGCCACCAGCCACTGGAATGCGGTGGACCTGCTCACCGCCTTCGGCGCCA TTCCGACCGAAGGGCGCGTGGTGCGGGACGGCAATCTCATCACCGCCGGCGGCGTCACCTCCGGCATCGACTTCGGCCTC ACCGTGATCGCCGAGTTGCTGGGGGCGGAGACCGCGCAGCGGGTCCAGTTGGCACTGGAATATGCGCCCGCCCCGCCCTT CCAGTCCGGCACGCCGCAGGAGGCACCGGCGGAGATCGTGCAGGCGGTGCGCGAACGCTTCTCGGCCTCCCGCAAGGCTC GCGAGGCCATCATCGCCCGCATCACGGCCGCTTAA
Upstream 100 bases:
>100_bases TCGACCCGGCGGACCGGCATTGGCAGAAAGCGAGGGACATTTGGCATTTGCGCCAGATGCAACCGCCCTATGGTGGCTGC GTCAAGCACCGGAGTGTCCC
Downstream 100 bases:
>100_bases GAGGCTCCCGCAAAACGCTGGTGCAAACCGCTCGCCCGCCCCGCCCGTATAGGGCGGGTGACGCTGCGGGGTGACATGGC AAAGAGCGGGACATTGCGCT
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator AraC Family; Isonitrile Hydratase; DJ-1/PfpI Family; ThiJ Family Protein; AraC Family Transcription Regulator; Transcriptional Regulatory Protein; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA Family Transcriptional Regulator; Intracellular Protease/Amidase; AraC Family Regulatory Protein; Intracellular Protease/Amidase Protein; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MPLRFGILAFPDVQQLDLTGPYEVFASAPETEVLLIGRERAPVIASTGLPLVPTATYADCPPLDVLCVPGGAGVNALMED ADALDFIRSRAGEVRYLTSVCTGSLVLGAAGLLKGKRATSHWNAVDLLTAFGAIPTEGRVVRDGNLITAGGVTSGIDFGL TVIAELLGAETAQRVQLALEYAPAPPFQSGTPQEAPAEIVQAVRERFSASRKAREAIIARITAA
Sequences:
>Translated_224_residues MPLRFGILAFPDVQQLDLTGPYEVFASAPETEVLLIGRERAPVIASTGLPLVPTATYADCPPLDVLCVPGGAGVNALMED ADALDFIRSRAGEVRYLTSVCTGSLVLGAAGLLKGKRATSHWNAVDLLTAFGAIPTEGRVVRDGNLITAGGVTSGIDFGL TVIAELLGAETAQRVQLALEYAPAPPFQSGTPQEAPAEIVQAVRERFSASRKAREAIIARITAA >Mature_223_residues PLRFGILAFPDVQQLDLTGPYEVFASAPETEVLLIGRERAPVIASTGLPLVPTATYADCPPLDVLCVPGGAGVNALMEDA DALDFIRSRAGEVRYLTSVCTGSLVLGAAGLLKGKRATSHWNAVDLLTAFGAIPTEGRVVRDGNLITAGGVTSGIDFGLT VIAELLGAETAQRVQLALEYAPAPPFQSGTPQEAPAEIVQAVRERFSASRKAREAIIARITAA
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24653499, Length=148, Percent_Identity=31.0810810810811, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23396; Mature: 23265
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRFGILAFPDVQQLDLTGPYEVFASAPETEVLLIGRERAPVIASTGLPLVPTATYADC CCCEECEEECCCCCEECCCCHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCC PPLDVLCVPGGAGVNALMEDADALDFIRSRAGEVRYLTSVCTGSLVLGAAGLLKGKRATS CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCC HWNAVDLLTAFGAIPTEGRVVRDGNLITAGGVTSGIDFGLTVIAELLGAETAQRVQLALE CCCHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHE YAPAPPFQSGTPQEAPAEIVQAVRERFSASRKAREAIIARITAA ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLRFGILAFPDVQQLDLTGPYEVFASAPETEVLLIGRERAPVIASTGLPLVPTATYADC CCEECEEECCCCCEECCCCHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCC PPLDVLCVPGGAGVNALMEDADALDFIRSRAGEVRYLTSVCTGSLVLGAAGLLKGKRATS CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCC HWNAVDLLTAFGAIPTEGRVVRDGNLITAGGVTSGIDFGLTVIAELLGAETAQRVQLALE CCCHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHE YAPAPPFQSGTPQEAPAEIVQAVRERFSASRKAREAIIARITAA ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA