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The map label for this gene is glpD [H]

Identifier: 158424333

GI number: 158424333

Start: 3074430

End: 3075980

Strand: Direct

Name: glpD [H]

Synonym: AZC_2709

Alternate gene names: 158424333

Gene position: 3074430-3075980 (Clockwise)

Preceding gene: 158424328

Following gene: 158424334

Centisome position: 57.25

GC content: 66.09

Gene sequence:

>1551_bases
GTGATTAATGTCGTTGCAGACGGTTGCACAATGGTGCGGCAACAGGGGAGCGGCGGCGACGTGAGCAGCCCGTTCGACAT
TCTGGTGGTCGGTGGCGGCATCAATGGCGCCGGCATTGCCCGCGACGCCGTGGGACGCGGCCTGTCCGTGATGATGGTGG
AGCAGGACGATCTCGCCGCTCACACGTCCTCCTGGTCCACCAAGCTCATCCATGGCGGCCTGCGCTATCTCGAATATTAC
GAGTTCCGGCTGGTGCGCGAGGCGCTGCTGGAGCGTGAGCGGCTGCTCGCCATGGCACCGCACATCATCCGTCCGCTGCG
CTTCGTTCTGCCGCACGACGTCTCCATCCGCCCGGCCTGGCTCGTGCGGCTGGGTCTGTTCTTTTACGACCACCTGGCCC
CTCGCAAGCGCCTGCCCGGCTGCGAACGGATCAACCTTTCCAGCGACCGGCGCGGTGCACCGCTGAAGCCGCTGACCAAG
GTCGGCTTTGAATATTCCGACTGCGCGGTGGATGACGCCCGCCTCGTCGTGCTCAACGCGCTCGATGCAAAGGAGCGCGG
CGCGATCGTCGAAGTGGGCACCCGCCTCGAGAGCGCCCGGCGCGAGGGTAAGCTGTGGGTGGCGACCCTCAAGGACGCCA
GCGGCGCGACACGCGAGGTCCGCGCCAAGGTGCTCGTCAATGCCGCCGGGCCGTGGGTGGCGGATGTTCTCAACCATCGC
CTCGGGCTCAACACCTCCAAGGGCGTGCGGCTGGTCAAGGGCAGCCATATCGTGGTGCCCCGCCTCTATGAGGGCACGCA
GGCCTATATCCTGCAAAATCCCGACAAGCGCATCATCTTCGCCATCCCCTATCAGGACGATCTGACGCTGATCGGCACGA
CGGACGTGCCCTATACGGGCGCGCCGCAGGATGTCGCCATCTCCGATGACGAGACGGACTATCTGATCTCCTCGATCAAC
CACTGGTTTAAGCGCGAGATCTCGCGCTCCGACATCGTGTGGGACTATTCCGGCGTGCGGCCGCTGTTCGACGACGGCTC
CATCAATGCCTCCGCCGTCACGCGCGATTATGTGTTCGATATCGATGCGCCGGAGGGCCAGGCACCGCTGCTCTCGGTGT
TCGGCGGCAAGCTCACCACCTATCGTAAGCTCGCCGAGCATGTGATGCGCGATCTCGCCCCGCACATTCCGGGCCTCAAG
CCCGCCTGGACGGCGGAGGGGACGCTGCCCGGCGGCGACATTCCCGATGGCGATGCCGACCGCTATGCCGCCGACCTCCT
GAAGCGCAAGCCCTTCCTCGGTGCTGATCGCGCCCGGCGTCTGGTGCACACCTACGGCACGCGGGTGGAAGCCATCGTGG
GCGGCGCCCGCTCGGCCGAGGACCTCGGCCGCGACTTCGGCGGCGGACTGACCGAAGCGGAACTGCGCTATCTCAAGAGC
GCGGAATGGGCGCGAACCGCCCGCGACGTGCTGTGGCGGCGCACCAAGCTCGGCCTGAAGCTGCCCAAAGAGGCGGCTGC
CGAAATCGACGCATTCCTCAACAGCATCTGA

Upstream 100 bases:

>100_bases
TTGCATTGCAGCATGTTGTGCGGATTAGCCGCCGCACCGCAACAAGGAACAACTTTCTTGAAATTTTCGTTTTTCGCGCA
CTATGAAATTTTGATGAAAG

Downstream 100 bases:

>100_bases
CGCCGGCCGCACCCAAGACGCGGACGGATGCCGGCAAGGTTAAAACGGGAGGAGACCATGACCAAATACGTGGGCGCCAT
CGATCAGGGCACGACGAGCA

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MINVVADGCTMVRQQGSGGDVSSPFDILVVGGGINGAGIARDAVGRGLSVMMVEQDDLAAHTSSWSTKLIHGGLRYLEYY
EFRLVREALLERERLLAMAPHIIRPLRFVLPHDVSIRPAWLVRLGLFFYDHLAPRKRLPGCERINLSSDRRGAPLKPLTK
VGFEYSDCAVDDARLVVLNALDAKERGAIVEVGTRLESARREGKLWVATLKDASGATREVRAKVLVNAAGPWVADVLNHR
LGLNTSKGVRLVKGSHIVVPRLYEGTQAYILQNPDKRIIFAIPYQDDLTLIGTTDVPYTGAPQDVAISDDETDYLISSIN
HWFKREISRSDIVWDYSGVRPLFDDGSINASAVTRDYVFDIDAPEGQAPLLSVFGGKLTTYRKLAEHVMRDLAPHIPGLK
PAWTAEGTLPGGDIPDGDADRYAADLLKRKPFLGADRARRLVHTYGTRVEAIVGGARSAEDLGRDFGGGLTEAELRYLKS
AEWARTARDVLWRRTKLGLKLPKEAAAEIDAFLNSI

Sequences:

>Translated_516_residues
MINVVADGCTMVRQQGSGGDVSSPFDILVVGGGINGAGIARDAVGRGLSVMMVEQDDLAAHTSSWSTKLIHGGLRYLEYY
EFRLVREALLERERLLAMAPHIIRPLRFVLPHDVSIRPAWLVRLGLFFYDHLAPRKRLPGCERINLSSDRRGAPLKPLTK
VGFEYSDCAVDDARLVVLNALDAKERGAIVEVGTRLESARREGKLWVATLKDASGATREVRAKVLVNAAGPWVADVLNHR
LGLNTSKGVRLVKGSHIVVPRLYEGTQAYILQNPDKRIIFAIPYQDDLTLIGTTDVPYTGAPQDVAISDDETDYLISSIN
HWFKREISRSDIVWDYSGVRPLFDDGSINASAVTRDYVFDIDAPEGQAPLLSVFGGKLTTYRKLAEHVMRDLAPHIPGLK
PAWTAEGTLPGGDIPDGDADRYAADLLKRKPFLGADRARRLVHTYGTRVEAIVGGARSAEDLGRDFGGGLTEAELRYLKS
AEWARTARDVLWRRTKLGLKLPKEAAAEIDAFLNSI
>Mature_516_residues
MINVVADGCTMVRQQGSGGDVSSPFDILVVGGGINGAGIARDAVGRGLSVMMVEQDDLAAHTSSWSTKLIHGGLRYLEYY
EFRLVREALLERERLLAMAPHIIRPLRFVLPHDVSIRPAWLVRLGLFFYDHLAPRKRLPGCERINLSSDRRGAPLKPLTK
VGFEYSDCAVDDARLVVLNALDAKERGAIVEVGTRLESARREGKLWVATLKDASGATREVRAKVLVNAAGPWVADVLNHR
LGLNTSKGVRLVKGSHIVVPRLYEGTQAYILQNPDKRIIFAIPYQDDLTLIGTTDVPYTGAPQDVAISDDETDYLISSIN
HWFKREISRSDIVWDYSGVRPLFDDGSINASAVTRDYVFDIDAPEGQAPLLSVFGGKLTTYRKLAEHVMRDLAPHIPGLK
PAWTAEGTLPGGDIPDGDADRYAADLLKRKPFLGADRARRLVHTYGTRVEAIVGGARSAEDLGRDFGGGLTEAELRYLKS
AEWARTARDVLWRRTKLGLKLPKEAAAEIDAFLNSI

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=523, Percent_Identity=33.2695984703633, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI285002231, Length=523, Percent_Identity=33.2695984703633, Blast_Score=186, Evalue=4e-47,
Organism=Escherichia coli, GI2367226, Length=467, Percent_Identity=54.1755888650964, Blast_Score=491, Evalue=1e-140,
Organism=Escherichia coli, GI1788574, Length=397, Percent_Identity=27.9596977329975, Blast_Score=103, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17509253, Length=523, Percent_Identity=31.9311663479924, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI115534726, Length=518, Percent_Identity=31.0810810810811, Blast_Score=161, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6322036, Length=567, Percent_Identity=29.9823633156966, Blast_Score=171, Evalue=3e-43,
Organism=Drosophila melanogaster, GI161077125, Length=519, Percent_Identity=33.140655105973, Blast_Score=172, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24653942, Length=519, Percent_Identity=33.140655105973, Blast_Score=172, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24653944, Length=519, Percent_Identity=33.140655105973, Blast_Score=172, Evalue=6e-43,
Organism=Drosophila melanogaster, GI20130025, Length=519, Percent_Identity=33.140655105973, Blast_Score=172, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24586295, Length=521, Percent_Identity=27.831094049904, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI19921278, Length=519, Percent_Identity=24.4701348747592, Blast_Score=88, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 56810; Mature: 56810

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVVADGCTMVRQQGSGGDVSSPFDILVVGGGINGAGIARDAVGRGLSVMMVEQDDLAA
CCEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCEEEEEEECCCHHH
HTSSWSTKLIHGGLRYLEYYEFRLVREALLERERLLAMAPHIIRPLRFVLPHDVSIRPAW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LVRLGLFFYDHLAPRKRLPGCERINLSSDRRGAPLKPLTKVGFEYSDCAVDDARLVVLNA
HHHHHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEE
LDAKERGAIVEVGTRLESARREGKLWVATLKDASGATREVRAKVLVNAAGPWVADVLNHR
CCCCCCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHEEEEEEECCCCHHHHHHHHH
LGLNTSKGVRLVKGSHIVVPRLYEGTQAYILQNPDKRIIFAIPYQDDLTLIGTTDVPYTG
CCCCCCCCEEEEECCEEEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCC
APQDVAISDDETDYLISSINHWFKREISRSDIVWDYSGVRPLFDDGSINASAVTRDYVFD
CCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEEEEEEE
IDAPEGQAPLLSVFGGKLTTYRKLAEHVMRDLAPHIPGLKPAWTAEGTLPGGDIPDGDAD
CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
RYAADLLKRKPFLGADRARRLVHTYGTRVEAIVGGARSAEDLGRDFGGGLTEAELRYLKS
HHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEHHCCCCCHHHHHHHHCCCCCHHHHHHHHH
AEWARTARDVLWRRTKLGLKLPKEAAAEIDAFLNSI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MINVVADGCTMVRQQGSGGDVSSPFDILVVGGGINGAGIARDAVGRGLSVMMVEQDDLAA
CCEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCEEEEEEECCCHHH
HTSSWSTKLIHGGLRYLEYYEFRLVREALLERERLLAMAPHIIRPLRFVLPHDVSIRPAW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LVRLGLFFYDHLAPRKRLPGCERINLSSDRRGAPLKPLTKVGFEYSDCAVDDARLVVLNA
HHHHHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEE
LDAKERGAIVEVGTRLESARREGKLWVATLKDASGATREVRAKVLVNAAGPWVADVLNHR
CCCCCCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHEEEEEEECCCCHHHHHHHHH
LGLNTSKGVRLVKGSHIVVPRLYEGTQAYILQNPDKRIIFAIPYQDDLTLIGTTDVPYTG
CCCCCCCCEEEEECCEEEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCC
APQDVAISDDETDYLISSINHWFKREISRSDIVWDYSGVRPLFDDGSINASAVTRDYVFD
CCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEEEEEEE
IDAPEGQAPLLSVFGGKLTTYRKLAEHVMRDLAPHIPGLKPAWTAEGTLPGGDIPDGDAD
CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
RYAADLLKRKPFLGADRARRLVHTYGTRVEAIVGGARSAEDLGRDFGGGLTEAELRYLKS
HHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEHHCCCCCHHHHHHHHCCCCCHHHHHHHHH
AEWARTARDVLWRRTKLGLKLPKEAAAEIDAFLNSI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA