| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gsiB [H]
Identifier: 158424322
GI number: 158424322
Start: 3057816
End: 3059348
Strand: Reverse
Name: gsiB [H]
Synonym: AZC_2698
Alternate gene names: 158424322
Gene position: 3059348-3057816 (Counterclockwise)
Preceding gene: 158424323
Following gene: 158424321
Centisome position: 56.97
GC content: 65.23
Gene sequence:
>1533_bases ATGGCGATGGCATCCCGGACGGGCAGGCGGACAGGATTTCACGCGGCGCGGCTGGGTCGGGGGCTGCTGGTCGCTGCCGC TGTGTTGGGGCTGGGCGGCACCGCCCAGGCGGCGAAGGACCGACTGGTCGTGGGCATGCCCGTCGAGCCCACCGGCCTTG ATCCGACGGTGGCAGCGCCCGTGTCCATCGGGCAGGTCACCTGGCAGAATGTCTATCAGGGCCTGACCCGCGTGGACCGC CACGGCAAGGTCCAGCCGCAACTCGCGTCGGGCTGGACGGTATCGCCCGACGGCCTCGTCTACACCTTTACCTTACGGGA TGGCGTGGCCTTCCACGACGGCACGCCCTTCAACGCCGCCGCTGCCAAGTTCAGCCTTGACCGGGCGCGCGGCGCGGATT CGACCAATCCCCAGAAGCCCTATTTCGAGCCGATCGCATCCGTGGACGCGCCGGATGCGAAGACGCTGGTGGTCACCCTC AAGCGGCCGGTCAGCGATCTGACCTATCGTCTCGGAATGCCCGCGGCGGTGATGGTCGCGTCGAATTCCGCGGACGCCAA CCGTACGACGCCCGTGGGCACCGGGCCCTTCCGGTTCAAGGCCTGGGCCAAGGGTGACCGGGTGGAACTGGAGCGTTTCG CCGATTATTGGGACAAGGCCCACGCGCCGGCTCTGGCGCAGGTGACCTTCCGCTTCCTCGCCGATCCGCAGGCGCAGGCG GCGGCGCTGCGGGCCGGGGATGTGGACGCCTTCCCCGAGTTCAGCGCGCCGGAAATCTATACGGATTTCCAGAAGGACAA GAAATTCAGCACCGTCGTGGGCAACACCGAGCTGAAGATGGTGGCGGGCATGAACAATGCCCGCAAGCCCTTCAACGATG TGCGGGTGCGCAAGGCGCTGATGATGGCGGTGGATCGCAAGGCGCTGGTGGAGGGCGCGTGGTCCGGTTTCGGCACGCCC ATCGGCAGCCACTACACGCCGAACGATCCCGGTTTTGTCGATACGACGGGTGTGCTGCCCTATGATCCCGCCAAGGCCAA GGCGCTGCTGGCGCAGGCGGGCTATCCGAACGGCTTCACCTTCACTCTGAAGACGCCGCAGATGGCCTATCTGTCGCGCT CGGGGGAAGTGCTTCAGGCCATGCTGGCGGATGTGGGTGTGACGGTGAAGATCGAGCCCACGGAATTTCCGGCCAAATGG GTGCAGGAGGTCTTCAAGGACAAGGCCTATGACATGACTGTCATGACCCATGCGGAGCCACTCGACATCGATATCTACGC GCGCCCCAATTATTACTTCAATTACAACAGTCCAAAATTCAACGCGGCCTACACGGCCGCCGCTACGGCAACGGACGACG CCGCTCGCACCAAGGCCATTGGCGAGGCCCAGCGCATCCTTGCTGAGGAGGTTCCGGCGCTGTTCCTGTTCGTCATGCCC AAGCTCGGTGTCTGGAGCGCCAAGGTGGAGGGCATGTGGGAGAGCGAGCCCGTGCCCTCCAATGACCTGACCGAGGTGCG CTGGCGTGACTGA
Upstream 100 bases:
>100_bases CGGTCTTCCGAAGGTCGTTGACGATGGCCGTGCCGGCTTGCAGTGTTTCTAGGCAGTCCGGCGTTGTGCCGAGTCGATGG GCATTCAGGGTTGGTGAGGA
Downstream 100 bases:
>100_bases GCCCGGCCCGGTGCACGCGAGCTGAGGCGCGCTCCATGCTGGCTTTCGCCGTGCGACGCTTTCTCGGGCTGGTGCTGACG CTGGCAGTCATGTCGGCGGC
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MAMASRTGRRTGFHAARLGRGLLVAAAVLGLGGTAQAAKDRLVVGMPVEPTGLDPTVAAPVSIGQVTWQNVYQGLTRVDR HGKVQPQLASGWTVSPDGLVYTFTLRDGVAFHDGTPFNAAAAKFSLDRARGADSTNPQKPYFEPIASVDAPDAKTLVVTL KRPVSDLTYRLGMPAAVMVASNSADANRTTPVGTGPFRFKAWAKGDRVELERFADYWDKAHAPALAQVTFRFLADPQAQA AALRAGDVDAFPEFSAPEIYTDFQKDKKFSTVVGNTELKMVAGMNNARKPFNDVRVRKALMMAVDRKALVEGAWSGFGTP IGSHYTPNDPGFVDTTGVLPYDPAKAKALLAQAGYPNGFTFTLKTPQMAYLSRSGEVLQAMLADVGVTVKIEPTEFPAKW VQEVFKDKAYDMTVMTHAEPLDIDIYARPNYYFNYNSPKFNAAYTAAATATDDAARTKAIGEAQRILAEEVPALFLFVMP KLGVWSAKVEGMWESEPVPSNDLTEVRWRD
Sequences:
>Translated_510_residues MAMASRTGRRTGFHAARLGRGLLVAAAVLGLGGTAQAAKDRLVVGMPVEPTGLDPTVAAPVSIGQVTWQNVYQGLTRVDR HGKVQPQLASGWTVSPDGLVYTFTLRDGVAFHDGTPFNAAAAKFSLDRARGADSTNPQKPYFEPIASVDAPDAKTLVVTL KRPVSDLTYRLGMPAAVMVASNSADANRTTPVGTGPFRFKAWAKGDRVELERFADYWDKAHAPALAQVTFRFLADPQAQA AALRAGDVDAFPEFSAPEIYTDFQKDKKFSTVVGNTELKMVAGMNNARKPFNDVRVRKALMMAVDRKALVEGAWSGFGTP IGSHYTPNDPGFVDTTGVLPYDPAKAKALLAQAGYPNGFTFTLKTPQMAYLSRSGEVLQAMLADVGVTVKIEPTEFPAKW VQEVFKDKAYDMTVMTHAEPLDIDIYARPNYYFNYNSPKFNAAYTAAATATDDAARTKAIGEAQRILAEEVPALFLFVMP KLGVWSAKVEGMWESEPVPSNDLTEVRWRD >Mature_509_residues AMASRTGRRTGFHAARLGRGLLVAAAVLGLGGTAQAAKDRLVVGMPVEPTGLDPTVAAPVSIGQVTWQNVYQGLTRVDRH GKVQPQLASGWTVSPDGLVYTFTLRDGVAFHDGTPFNAAAAKFSLDRARGADSTNPQKPYFEPIASVDAPDAKTLVVTLK RPVSDLTYRLGMPAAVMVASNSADANRTTPVGTGPFRFKAWAKGDRVELERFADYWDKAHAPALAQVTFRFLADPQAQAA ALRAGDVDAFPEFSAPEIYTDFQKDKKFSTVVGNTELKMVAGMNNARKPFNDVRVRKALMMAVDRKALVEGAWSGFGTPI GSHYTPNDPGFVDTTGVLPYDPAKAKALLAQAGYPNGFTFTLKTPQMAYLSRSGEVLQAMLADVGVTVKIEPTEFPAKWV QEVFKDKAYDMTVMTHAEPLDIDIYARPNYYFNYNSPKFNAAYTAAATATDDAARTKAIGEAQRILAEEVPALFLFVMPK LGVWSAKVEGMWESEPVPSNDLTEVRWRD
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=514, Percent_Identity=31.3229571984436, Blast_Score=204, Evalue=2e-53, Organism=Escherichia coli, GI1789966, Length=350, Percent_Identity=30.2857142857143, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1789887, Length=413, Percent_Identity=29.7820823244552, Blast_Score=131, Evalue=8e-32, Organism=Escherichia coli, GI1787762, Length=471, Percent_Identity=26.1146496815287, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI1787495, Length=543, Percent_Identity=25.9668508287293, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI87081878, Length=509, Percent_Identity=25.7367387033399, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1787551, Length=487, Percent_Identity=25.6673511293634, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1789397, Length=482, Percent_Identity=24.2738589211618, Blast_Score=99, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 55386; Mature: 55255
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMASRTGRRTGFHAARLGRGLLVAAAVLGLGGTAQAAKDRLVVGMPVEPTGLDPTVAAP CCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCHHCCCCEEEECCCCCCCCCCCCCCC VSIGQVTWQNVYQGLTRVDRHGKVQPQLASGWTVSPDGLVYTFTLRDGVAFHDGTPFNAA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEEECCCEEECCCCCCCHH AAKFSLDRARGADSTNPQKPYFEPIASVDAPDAKTLVVTLKRPVSDLTYRLGMPAAVMVA HHHEEHHHHCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCEEEEEE SNSADANRTTPVGTGPFRFKAWAKGDRVELERFADYWDKAHAPALAQVTFRFLADPQAQA CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH AALRAGDVDAFPEFSAPEIYTDFQKDKKFSTVVGNTELKMVAGMNNARKPFNDVRVRKAL HHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHH MMAVDRKALVEGAWSGFGTPIGSHYTPNDPGFVDTTGVLPYDPAKAKALLAQAGYPNGFT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCEE FTLKTPQMAYLSRSGEVLQAMLADVGVTVKIEPTEFPAKWVQEVFKDKAYDMTVMTHAEP EEECCCCCEEHHCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCC LDIDIYARPNYYFNYNSPKFNAAYTAAATATDDAARTKAIGEAQRILAEEVPALFLFVMP CEEEEEECCCEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KLGVWSAKVEGMWESEPVPSNDLTEVRWRD CCCCEEHEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AMASRTGRRTGFHAARLGRGLLVAAAVLGLGGTAQAAKDRLVVGMPVEPTGLDPTVAAP CCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCHHCCCCEEEECCCCCCCCCCCCCCC VSIGQVTWQNVYQGLTRVDRHGKVQPQLASGWTVSPDGLVYTFTLRDGVAFHDGTPFNAA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEEECCCEEECCCCCCCHH AAKFSLDRARGADSTNPQKPYFEPIASVDAPDAKTLVVTLKRPVSDLTYRLGMPAAVMVA HHHEEHHHHCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCEEEEEE SNSADANRTTPVGTGPFRFKAWAKGDRVELERFADYWDKAHAPALAQVTFRFLADPQAQA CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH AALRAGDVDAFPEFSAPEIYTDFQKDKKFSTVVGNTELKMVAGMNNARKPFNDVRVRKAL HHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHH MMAVDRKALVEGAWSGFGTPIGSHYTPNDPGFVDTTGVLPYDPAKAKALLAQAGYPNGFT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCEE FTLKTPQMAYLSRSGEVLQAMLADVGVTVKIEPTEFPAKWVQEVFKDKAYDMTVMTHAEP EEECCCCCEEHHCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCC LDIDIYARPNYYFNYNSPKFNAAYTAAATATDDAARTKAIGEAQRILAEEVPALFLFVMP CEEEEEECCCEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KLGVWSAKVEGMWESEPVPSNDLTEVRWRD CCCCEEHEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA