Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is gsiD [H]

Identifier: 158424320

GI number: 158424320

Start: 3055997

End: 3056836

Strand: Reverse

Name: gsiD [H]

Synonym: AZC_2696

Alternate gene names: 158424320

Gene position: 3056836-3055997 (Counterclockwise)

Preceding gene: 158424321

Following gene: 158424319

Centisome position: 56.93

GC content: 69.76

Gene sequence:

>840_bases
ATGAGCGCGCCTCTCCTGCGTCGGATCGCCGGGCGGATGCAGCTTCTGGTGGGCGCCGTTCTCACCGCTGCCATCGTCGG
CATTGCCATCCTCTCCCAATTCTGGACGCCGGAGGCGCCGACGCGGATGCGCTTCGCGCTGAAGCTCAAAGGGCCGCTGG
TGCAGGGGCTTCTGGGCACGGACCATTTCGGCCGGGATCTCACCTCCATGCTCATGGTGGGGGCCTGGAACTCTCTCTCC
ATCGGCGTGCTGGCGGTGGCTGTGGGCGCGAGCCTTGGCACGCTTCTGGGTGTTTCTGCGGCGGCGCGGGGCGGGCTTTT
GGAGGGCGCCATCATGCGCCTGTGCGACATTCTCTTTGCCTTTCCCGCCGTGCTCTCCGCCATCGTGCTCGGCGCGCTGA
TGGGGCCGGGGGCTGTCACCGCCGTCATCGCCATCGGCGTGTTCATGGTTCCGGTGTTTGCCCGCGTCACGCGCGGGGCC
GCGGCGCAGGTGTGGGCGCGCGATTATGTTCTGGCGGCGCGGGCAGCGGGGAAGGGGCCGGCGCGCATCACGCTGGAGCA
TGTGCTGCCCAACATCGCCAGCCAGATCATCGTACAGGCCACCATCCAGCTTGGCCTCGCCATTCTCACCGAGGCGGGCC
TGAGCTTCCTCGGCCTCGGCATCGCGCCGCCGGCGCCCTCGTGGGGGCGGATGCTGGCGGACGCACAGACCTATCTCTCG
GCGGCCCCGCACCTCGCGCTAGTGCCGGGCATCGCCATCGCGCTCAGCGTGCTGGGCTTCAACCTGCTGGGGGATGGCCT
GCGCGACCTCATCGACCCGCGCCGGAGGCTCGGCGGCTGA

Upstream 100 bases:

>100_bases
TCCGCGATGTGGTGCTCTTGTTCGCCGGGCTCGTGGTGGTGGTGAACTTTCTCGTGGACATGGCCTATCTCGCCCTCGAT
CCGCGCCTCCGGGGGCGGGG

Downstream 100 bases:

>100_bases
TGCTGGAGGTGCGCGATCTCTCCATTGATCTCACCCGGCCGGACGGCGGTCGGCTGCGGGTGGTGAATGACGTGTCCTTC
GCGCTGGAGCGGGGCCGCAC

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSAPLLRRIAGRMQLLVGAVLTAAIVGIAILSQFWTPEAPTRMRFALKLKGPLVQGLLGTDHFGRDLTSMLMVGAWNSLS
IGVLAVAVGASLGTLLGVSAAARGGLLEGAIMRLCDILFAFPAVLSAIVLGALMGPGAVTAVIAIGVFMVPVFARVTRGA
AAQVWARDYVLAARAAGKGPARITLEHVLPNIASQIIVQATIQLGLAILTEAGLSFLGLGIAPPAPSWGRMLADAQTYLS
AAPHLALVPGIAIALSVLGFNLLGDGLRDLIDPRRRLGG

Sequences:

>Translated_279_residues
MSAPLLRRIAGRMQLLVGAVLTAAIVGIAILSQFWTPEAPTRMRFALKLKGPLVQGLLGTDHFGRDLTSMLMVGAWNSLS
IGVLAVAVGASLGTLLGVSAAARGGLLEGAIMRLCDILFAFPAVLSAIVLGALMGPGAVTAVIAIGVFMVPVFARVTRGA
AAQVWARDYVLAARAAGKGPARITLEHVLPNIASQIIVQATIQLGLAILTEAGLSFLGLGIAPPAPSWGRMLADAQTYLS
AAPHLALVPGIAIALSVLGFNLLGDGLRDLIDPRRRLGG
>Mature_278_residues
SAPLLRRIAGRMQLLVGAVLTAAIVGIAILSQFWTPEAPTRMRFALKLKGPLVQGLLGTDHFGRDLTSMLMVGAWNSLSI
GVLAVAVGASLGTLLGVSAAARGGLLEGAIMRLCDILFAFPAVLSAIVLGALMGPGAVTAVIAIGVFMVPVFARVTRGAA
AQVWARDYVLAARAAGKGPARITLEHVLPNIASQIIVQATIQLGLAILTEAGLSFLGLGIAPPAPSWGRMLADAQTYLSA
APHLALVPGIAIALSVLGFNLLGDGLRDLIDPRRRLGG

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=269, Percent_Identity=40.8921933085502, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1787760, Length=272, Percent_Identity=34.5588235294118, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=35.8024691358025, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1789964, Length=255, Percent_Identity=41.5686274509804, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1787549, Length=269, Percent_Identity=33.457249070632, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787498, Length=264, Percent_Identity=34.0909090909091, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=27.8761061946903, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28700; Mature: 28569

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAPLLRRIAGRMQLLVGAVLTAAIVGIAILSQFWTPEAPTRMRFALKLKGPLVQGLLGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCHHHHHHHCC
DHFGRDLTSMLMVGAWNSLSIGVLAVAVGASLGTLLGVSAAARGGLLEGAIMRLCDILFA
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FPAVLSAIVLGALMGPGAVTAVIAIGVFMVPVFARVTRGAAAQVWARDYVLAARAAGKGP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
ARITLEHVLPNIASQIIVQATIQLGLAILTEAGLSFLGLGIAPPAPSWGRMLADAQTYLS
HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AAPHLALVPGIAIALSVLGFNLLGDGLRDLIDPRRRLGG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]