| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gsiD [H]
Identifier: 158424320
GI number: 158424320
Start: 3055997
End: 3056836
Strand: Reverse
Name: gsiD [H]
Synonym: AZC_2696
Alternate gene names: 158424320
Gene position: 3056836-3055997 (Counterclockwise)
Preceding gene: 158424321
Following gene: 158424319
Centisome position: 56.93
GC content: 69.76
Gene sequence:
>840_bases ATGAGCGCGCCTCTCCTGCGTCGGATCGCCGGGCGGATGCAGCTTCTGGTGGGCGCCGTTCTCACCGCTGCCATCGTCGG CATTGCCATCCTCTCCCAATTCTGGACGCCGGAGGCGCCGACGCGGATGCGCTTCGCGCTGAAGCTCAAAGGGCCGCTGG TGCAGGGGCTTCTGGGCACGGACCATTTCGGCCGGGATCTCACCTCCATGCTCATGGTGGGGGCCTGGAACTCTCTCTCC ATCGGCGTGCTGGCGGTGGCTGTGGGCGCGAGCCTTGGCACGCTTCTGGGTGTTTCTGCGGCGGCGCGGGGCGGGCTTTT GGAGGGCGCCATCATGCGCCTGTGCGACATTCTCTTTGCCTTTCCCGCCGTGCTCTCCGCCATCGTGCTCGGCGCGCTGA TGGGGCCGGGGGCTGTCACCGCCGTCATCGCCATCGGCGTGTTCATGGTTCCGGTGTTTGCCCGCGTCACGCGCGGGGCC GCGGCGCAGGTGTGGGCGCGCGATTATGTTCTGGCGGCGCGGGCAGCGGGGAAGGGGCCGGCGCGCATCACGCTGGAGCA TGTGCTGCCCAACATCGCCAGCCAGATCATCGTACAGGCCACCATCCAGCTTGGCCTCGCCATTCTCACCGAGGCGGGCC TGAGCTTCCTCGGCCTCGGCATCGCGCCGCCGGCGCCCTCGTGGGGGCGGATGCTGGCGGACGCACAGACCTATCTCTCG GCGGCCCCGCACCTCGCGCTAGTGCCGGGCATCGCCATCGCGCTCAGCGTGCTGGGCTTCAACCTGCTGGGGGATGGCCT GCGCGACCTCATCGACCCGCGCCGGAGGCTCGGCGGCTGA
Upstream 100 bases:
>100_bases TCCGCGATGTGGTGCTCTTGTTCGCCGGGCTCGTGGTGGTGGTGAACTTTCTCGTGGACATGGCCTATCTCGCCCTCGAT CCGCGCCTCCGGGGGCGGGG
Downstream 100 bases:
>100_bases TGCTGGAGGTGCGCGATCTCTCCATTGATCTCACCCGGCCGGACGGCGGTCGGCTGCGGGTGGTGAATGACGTGTCCTTC GCGCTGGAGCGGGGCCGCAC
Product: peptide ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSAPLLRRIAGRMQLLVGAVLTAAIVGIAILSQFWTPEAPTRMRFALKLKGPLVQGLLGTDHFGRDLTSMLMVGAWNSLS IGVLAVAVGASLGTLLGVSAAARGGLLEGAIMRLCDILFAFPAVLSAIVLGALMGPGAVTAVIAIGVFMVPVFARVTRGA AAQVWARDYVLAARAAGKGPARITLEHVLPNIASQIIVQATIQLGLAILTEAGLSFLGLGIAPPAPSWGRMLADAQTYLS AAPHLALVPGIAIALSVLGFNLLGDGLRDLIDPRRRLGG
Sequences:
>Translated_279_residues MSAPLLRRIAGRMQLLVGAVLTAAIVGIAILSQFWTPEAPTRMRFALKLKGPLVQGLLGTDHFGRDLTSMLMVGAWNSLS IGVLAVAVGASLGTLLGVSAAARGGLLEGAIMRLCDILFAFPAVLSAIVLGALMGPGAVTAVIAIGVFMVPVFARVTRGA AAQVWARDYVLAARAAGKGPARITLEHVLPNIASQIIVQATIQLGLAILTEAGLSFLGLGIAPPAPSWGRMLADAQTYLS AAPHLALVPGIAIALSVLGFNLLGDGLRDLIDPRRRLGG >Mature_278_residues SAPLLRRIAGRMQLLVGAVLTAAIVGIAILSQFWTPEAPTRMRFALKLKGPLVQGLLGTDHFGRDLTSMLMVGAWNSLSI GVLAVAVGASLGTLLGVSAAARGGLLEGAIMRLCDILFAFPAVLSAIVLGALMGPGAVTAVIAIGVFMVPVFARVTRGAA AQVWARDYVLAARAAGKGPARITLEHVLPNIASQIIVQATIQLGLAILTEAGLSFLGLGIAPPAPSWGRMLADAQTYLSA APHLALVPGIAIALSVLGFNLLGDGLRDLIDPRRRLGG
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=269, Percent_Identity=40.8921933085502, Blast_Score=206, Evalue=1e-54, Organism=Escherichia coli, GI1787760, Length=272, Percent_Identity=34.5588235294118, Blast_Score=157, Evalue=8e-40, Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=35.8024691358025, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1789964, Length=255, Percent_Identity=41.5686274509804, Blast_Score=150, Evalue=8e-38, Organism=Escherichia coli, GI1787549, Length=269, Percent_Identity=33.457249070632, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1787498, Length=264, Percent_Identity=34.0909090909091, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=27.8761061946903, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28700; Mature: 28569
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLLRRIAGRMQLLVGAVLTAAIVGIAILSQFWTPEAPTRMRFALKLKGPLVQGLLGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCHHHHHHHCC DHFGRDLTSMLMVGAWNSLSIGVLAVAVGASLGTLLGVSAAARGGLLEGAIMRLCDILFA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FPAVLSAIVLGALMGPGAVTAVIAIGVFMVPVFARVTRGAAAQVWARDYVLAARAAGKGP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC ARITLEHVLPNIASQIIVQATIQLGLAILTEAGLSFLGLGIAPPAPSWGRMLADAQTYLS HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AAPHLALVPGIAIALSVLGFNLLGDGLRDLIDPRRRLGG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAPLLRRIAGRMQLLVGAVLTAAIVGIAILSQFWTPEAPTRMRFALKLKGPLVQGLLGT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCHHHHHHHCC DHFGRDLTSMLMVGAWNSLSIGVLAVAVGASLGTLLGVSAAARGGLLEGAIMRLCDILFA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FPAVLSAIVLGALMGPGAVTAVIAIGVFMVPVFARVTRGAAAQVWARDYVLAARAAGKGP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC ARITLEHVLPNIASQIIVQATIQLGLAILTEAGLSFLGLGIAPPAPSWGRMLADAQTYLS HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AAPHLALVPGIAIALSVLGFNLLGDGLRDLIDPRRRLGG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]