| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is sam [H]
Identifier: 158424302
GI number: 158424302
Start: 3036616
End: 3037488
Strand: Reverse
Name: sam [H]
Synonym: AZC_2678
Alternate gene names: 158424302
Gene position: 3037488-3036616 (Counterclockwise)
Preceding gene: 158424303
Following gene: 158424295
Centisome position: 56.57
GC content: 68.96
Gene sequence:
>873_bases ATGGCGCAGGCGGAAGCGGCGCCGGTGCCCGTGGCGACATCCTGGGTGGCGGTGCCGATGATGCTCGGTGCCATGCTGTG CCTGACGCTGCTCGATTCGCTGCTCAAGCACCTGGCGGCCACGAACCCCGTGGGCCCGCTCGTGTTCTTCCGTAATCTGG TGCAGGTGAGCGTGCTGCTCATGGTGGCGCGGGCGGCGGCTCCGGAAGCGCTGCGTACGCCCCAGCTCGGCCTTCACCTC TGCCGTGGGGCGTGCCTCTTCGCGACGACGGTGCTCATCACCCTCGCGCTCACGCACCTGCCCATGGCACAGACCTATGC GCTGACCTTTTCAGCGCCGCTGATGGCGACCCTGCTGGCGCTGGTGTTTCTCGGGGAGCGGCCGAAGGCGGCCCAGTGGG CCTGCATGGCGGCGGGTTTTGCGGGGGTGCTGATCGCCCTTGACCCGTCCGCTGCCCTGTCGCTGGCCCTTCTGCTGCCT TTGGCGCAGGCGGCGGCGAACGCGGTGTTCTATGTGCTGACGCGCTATGCCGGGCGACGGGAGGGGGCGTTGGCCCTGGT CCTGTGGGCGGGCGTCGGGGCGCTCACCGTCAGTGCCGTCGGCCTTTTGGCCTTCCAGCCCATGGCGCTCAGGACGTGGC TGCTGCTGGGTCTGGCAGGCCTGCTCGGCACCTGTGGCCAGTTGCTTATGGCGGGCGCCTTCCGCCGGGCTTCGACGGCG GTCGTCTCGCCGCTCGTCTATTCGCAGATCGTGTGGGCGATGCTGCTCGGCTTCGTGCTATTCGACGAGGTTCCGTCCAT GAGCTCCATCGTCGGCGGTCTTGTGGTCGCGGCAAGCGGAATCGGCGTGGTGCGCTTCAGCCGCCTGCGCTAA
Upstream 100 bases:
>100_bases GCGGTCGCATTGTCGAAACCGGCGCACCCGCCCAGATCTTCGATGCTCCGGCTGAGGCCCGGACTCGGGATTTCGTCTCC AAGATCCTGCGCCACTGACC
Downstream 100 bases:
>100_bases GGGCCTCCGGCGCAGGGCACCGGAAGCCAGTCTGAACTCAGCTCGCCGTCGTCGGCGCGGCACCGGGGGCAGCGGGGCGG CCACCACGTCCGGCGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MAQAEAAPVPVATSWVAVPMMLGAMLCLTLLDSLLKHLAATNPVGPLVFFRNLVQVSVLLMVARAAAPEALRTPQLGLHL CRGACLFATTVLITLALTHLPMAQTYALTFSAPLMATLLALVFLGERPKAAQWACMAAGFAGVLIALDPSAALSLALLLP LAQAAANAVFYVLTRYAGRREGALALVLWAGVGALTVSAVGLLAFQPMALRTWLLLGLAGLLGTCGQLLMAGAFRRASTA VVSPLVYSQIVWAMLLGFVLFDEVPSMSSIVGGLVVAASGIGVVRFSRLR
Sequences:
>Translated_290_residues MAQAEAAPVPVATSWVAVPMMLGAMLCLTLLDSLLKHLAATNPVGPLVFFRNLVQVSVLLMVARAAAPEALRTPQLGLHL CRGACLFATTVLITLALTHLPMAQTYALTFSAPLMATLLALVFLGERPKAAQWACMAAGFAGVLIALDPSAALSLALLLP LAQAAANAVFYVLTRYAGRREGALALVLWAGVGALTVSAVGLLAFQPMALRTWLLLGLAGLLGTCGQLLMAGAFRRASTA VVSPLVYSQIVWAMLLGFVLFDEVPSMSSIVGGLVVAASGIGVVRFSRLR >Mature_289_residues AQAEAAPVPVATSWVAVPMMLGAMLCLTLLDSLLKHLAATNPVGPLVFFRNLVQVSVLLMVARAAAPEALRTPQLGLHLC RGACLFATTVLITLALTHLPMAQTYALTFSAPLMATLLALVFLGERPKAAQWACMAAGFAGVLIALDPSAALSLALLLPL AQAAANAVFYVLTRYAGRREGALALVLWAGVGALTVSAVGLLAFQPMALRTWLLLGLAGLLGTCGQLLMAGAFRRASTAV VSPLVYSQIVWAMLLGFVLFDEVPSMSSIVGGLVVAASGIGVVRFSRLR
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30192; Mature: 30061
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAEAAPVPVATSWVAVPMMLGAMLCLTLLDSLLKHLAATNPVGPLVFFRNLVQVSVLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MVARAAAPEALRTPQLGLHLCRGACLFATTVLITLALTHLPMAQTYALTFSAPLMATLLA HHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVFLGERPKAAQWACMAAGFAGVLIALDPSAALSLALLLPLAQAAANAVFYVLTRYAGRR HHHHCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EGALALVLWAGVGALTVSAVGLLAFQPMALRTWLLLGLAGLLGTCGQLLMAGAFRRASTA CCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVSPLVYSQIVWAMLLGFVLFDEVPSMSSIVGGLVVAASGIGVVRFSRLR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCC >Mature Secondary Structure AQAEAAPVPVATSWVAVPMMLGAMLCLTLLDSLLKHLAATNPVGPLVFFRNLVQVSVLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MVARAAAPEALRTPQLGLHLCRGACLFATTVLITLALTHLPMAQTYALTFSAPLMATLLA HHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVFLGERPKAAQWACMAAGFAGVLIALDPSAALSLALLLPLAQAAANAVFYVLTRYAGRR HHHHCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EGALALVLWAGVGALTVSAVGLLAFQPMALRTWLLLGLAGLLGTCGQLLMAGAFRRASTA CCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVSPLVYSQIVWAMLLGFVLFDEVPSMSSIVGGLVVAASGIGVVRFSRLR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]