| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424270
Identifier: 158424270
GI number: 158424270
Start: 2997282
End: 2998298
Strand: Reverse
Name: 158424270
Synonym: AZC_2646
Alternate gene names: NA
Gene position: 2998298-2997282 (Counterclockwise)
Preceding gene: 158424272
Following gene: 158424269
Centisome position: 55.84
GC content: 62.24
Gene sequence:
>1017_bases ATGCGGATGATCACCCGCAGGCAGACACTTGCGCTGGCCGCCGGCCTTGCCACGGCCCCGTGCTGGCCGGCCGTGGCGCA GGCGAAGACCGAAGTCTCGCTCAGCCGGCAGCCGGGCATTCTCTATATGCCCACGCATGTCATCGAAAAGCAGAAGCTGA TCGAGAAGCACGCCGAGAAGCTTGGCGTGCCGAACGTCACCGCCAAATGGATGTCGTTCTCCAATGGCGGAGCACAGCAG GATGCGCTGCTTTCCGGCGGGGTCGACATCATCAACACCGGCACCGGGCCGCTTCTGGTGCTGTGGGACAAGACGCGCGG CAAGGTGAAGGGCATCGTGGCGAGTTCCGCCCAGCCGCTCCAACTCATCAGCCGCGATCCGCGCATCAAGAGCCTCAAGG ATCTCCAGGCCGGCGACAAGATCGCCGTGCCGACCGTGCGCGTCTCGACGCAAGCCATCCTTCTCCAGATGGCGGCAAGC CAGCTCTACGGGCCGGACAAGTGGAACCATTTCGATCCCATGACCGTCCAACTTGGCCATCCCGATGCATTCGTCGCCAT GAAGAATGCCGGACATGAAGTGAAGAACCACTTCGCCGCGCCGCCCTTCCAGACCTACGAACTGCAGCAGATCCCCGAAG CGCACGTGGTGGCGACCTCCGCCGACATCATCGGCTCGCCCCTGAGCCAGGGTCAGTTCATGACCATGACCACCTTTGCG GAGGCCAATCCCAAGATTATCCAGGCCCTGCGCAATGCGGCGGAAGAAGCCAAGACCTTCATCGAGAAGAACCCTGCCGA GGCGGTGGAGATCTATCGCGAGGTGACGGGCGACAAGACGTCGACGGCGGAACTGCTCGAAGTGCTGAAGCAGCCGGGCA TGATGGAATGGAACATCTACCCGCAGGGTACGATGAAGTTCGCCGCTCATCTGAACCGGACCGGCGCCATCAAGACGCTG CCAACCTCGTGGAAGGACTATTATCTGCCGGTGGCCCATGACCTCCCCGGCAATTGA
Upstream 100 bases:
>100_bases TCGCATGGCCGAGCGGAGGGGCAGGGACGCGGCGGCGGACCGAGATCCGCGGTAACGCGCATCCCTGACATGACGGCCGG AGCGGCCGCAAAGGGGAGGG
Downstream 100 bases:
>100_bases GTTCGCCGCCGGCGGGCCCGTCATGGCCCCGGCGGTGGCTGCCGCCTCTCCTGTGGCGGCCGTGACAGCGCAGGATCGTG CCATGTCCGAGCCCTTGCTC
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Transporter Periplasmic Component; Nlpa Lipoprotein; ABC-Type Transporter Periplasmic; Periplasmic Protein
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MRMITRRQTLALAAGLATAPCWPAVAQAKTEVSLSRQPGILYMPTHVIEKQKLIEKHAEKLGVPNVTAKWMSFSNGGAQQ DALLSGGVDIINTGTGPLLVLWDKTRGKVKGIVASSAQPLQLISRDPRIKSLKDLQAGDKIAVPTVRVSTQAILLQMAAS QLYGPDKWNHFDPMTVQLGHPDAFVAMKNAGHEVKNHFAAPPFQTYELQQIPEAHVVATSADIIGSPLSQGQFMTMTTFA EANPKIIQALRNAAEEAKTFIEKNPAEAVEIYREVTGDKTSTAELLEVLKQPGMMEWNIYPQGTMKFAAHLNRTGAIKTL PTSWKDYYLPVAHDLPGN
Sequences:
>Translated_338_residues MRMITRRQTLALAAGLATAPCWPAVAQAKTEVSLSRQPGILYMPTHVIEKQKLIEKHAEKLGVPNVTAKWMSFSNGGAQQ DALLSGGVDIINTGTGPLLVLWDKTRGKVKGIVASSAQPLQLISRDPRIKSLKDLQAGDKIAVPTVRVSTQAILLQMAAS QLYGPDKWNHFDPMTVQLGHPDAFVAMKNAGHEVKNHFAAPPFQTYELQQIPEAHVVATSADIIGSPLSQGQFMTMTTFA EANPKIIQALRNAAEEAKTFIEKNPAEAVEIYREVTGDKTSTAELLEVLKQPGMMEWNIYPQGTMKFAAHLNRTGAIKTL PTSWKDYYLPVAHDLPGN >Mature_338_residues MRMITRRQTLALAAGLATAPCWPAVAQAKTEVSLSRQPGILYMPTHVIEKQKLIEKHAEKLGVPNVTAKWMSFSNGGAQQ DALLSGGVDIINTGTGPLLVLWDKTRGKVKGIVASSAQPLQLISRDPRIKSLKDLQAGDKIAVPTVRVSTQAILLQMAAS QLYGPDKWNHFDPMTVQLGHPDAFVAMKNAGHEVKNHFAAPPFQTYELQQIPEAHVVATSADIIGSPLSQGQFMTMTTFA EANPKIIQALRNAAEEAKTFIEKNPAEAVEIYREVTGDKTSTAELLEVLKQPGMMEWNIYPQGTMKFAAHLNRTGAIKTL PTSWKDYYLPVAHDLPGN
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36924; Mature: 36924
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMITRRQTLALAAGLATAPCWPAVAQAKTEVSLSRQPGILYMPTHVIEKQKLIEKHAEK CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECCCCCEEEECHHHHHHHHHHHHHHHH LGVPNVTAKWMSFSNGGAQQDALLSGGVDIINTGTGPLLVLWDKTRGKVKGIVASSAQPL CCCCCCCHHHEECCCCCCCCHHHHHCCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCH QLISRDPRIKSLKDLQAGDKIAVPTVRVSTQAILLQMAASQLYGPDKWNHFDPMTVQLGH HHHCCCCCHHHHHHHCCCCEEECCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC PDAFVAMKNAGHEVKNHFAAPPFQTYELQQIPEAHVVATSADIIGSPLSQGQFMTMTTFA CCEEEEECCCCHHHHHCCCCCCCCCCHHHHCCCCCEEEECHHHHCCCCCCCCEEEEEEEC EANPKIIQALRNAAEEAKTFIEKNPAEAVEIYREVTGDKTSTAELLEVLKQPGMMEWNIY CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEC PQGTMKFAAHLNRTGAIKTLPTSWKDYYLPVAHDLPGN CCCHHHHHHHCCCCCCEEECCCCCCCEEEEECCCCCCC >Mature Secondary Structure MRMITRRQTLALAAGLATAPCWPAVAQAKTEVSLSRQPGILYMPTHVIEKQKLIEKHAEK CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECCCCCEEEECHHHHHHHHHHHHHHHH LGVPNVTAKWMSFSNGGAQQDALLSGGVDIINTGTGPLLVLWDKTRGKVKGIVASSAQPL CCCCCCCHHHEECCCCCCCCHHHHHCCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCH QLISRDPRIKSLKDLQAGDKIAVPTVRVSTQAILLQMAASQLYGPDKWNHFDPMTVQLGH HHHCCCCCHHHHHHHCCCCEEECCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC PDAFVAMKNAGHEVKNHFAAPPFQTYELQQIPEAHVVATSADIIGSPLSQGQFMTMTTFA CCEEEEECCCCHHHHHCCCCCCCCCCHHHHCCCCCEEEECHHHHCCCCCCCCEEEEEEEC EANPKIIQALRNAAEEAKTFIEKNPAEAVEIYREVTGDKTSTAELLEVLKQPGMMEWNIY CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEC PQGTMKFAAHLNRTGAIKTLPTSWKDYYLPVAHDLPGN CCCHHHHHHHCCCCCCEEECCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA