| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158424227
Identifier: 158424227
GI number: 158424227
Start: 2936865
End: 2937317
Strand: Direct
Name: 158424227
Synonym: AZC_2603
Alternate gene names: NA
Gene position: 2936865-2937317 (Clockwise)
Preceding gene: 158424226
Following gene: 158424228
Centisome position: 54.69
GC content: 65.34
Gene sequence:
>453_bases ATGAGCCCTCCGGCCAGTGTGACGCTGTCTGTTCTGGATCGCCTGCGCGGGGGCGAGGGTCCCCGCGTCGCGCGCATCCG CGACGGCATCCGGCAGGACCTGCAGGATCTGCTGAACACGCCGAACCGTGTGATCGGCTGGTCGCAGGCGCTGGATCAGC TCGAGACGTCCATCCTGAACTACGGGATCATGGATCTGTGCACCGCCAATCTCTCCACGGAGCAGCAGCGGGCCGCCGTG GTGGAGGAGATCGGCCGCATGATCCGGCTCTACGAGCCGCGCCTCTCGGACATGCGCATCCATGCGCTGGCCAATGCCGA TCCCTCCGATCGCTCGCTCCGCCTGCGGATCGAGGCCCGCATCTATGTGGAGAACGAGGTTGAGCCCATCATCTTCAACA CGGTCGTCGATCCGGTGCTGAACGCCATTTCGCTGTCGAGCGCCACACCGTGA
Upstream 100 bases:
>100_bases TGGCGCCCGACTGCGTCCGCGGCTCGGGCCTGCGCACCTTCCTCGTGGGCGAGGAGAGCCTTACCATTCTCCAGTTGGGA CGACTGGAGTTCGACGTCCA
Downstream 100 bases:
>100_bases GCGATCATCTCCTTCCGTATTACAATCGCGAGCTTCTCTATCTGCGCCGCATGGCGCAGGAATTTGCCGCCCGTCACCCC AAGATCGCCGGCAACCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System Lysozyme-Related Protein
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSPPASVTLSVLDRLRGGEGPRVARIRDGIRQDLQDLLNTPNRVIGWSQALDQLETSILNYGIMDLCTANLSTEQQRAAV VEEIGRMIRLYEPRLSDMRIHALANADPSDRSLRLRIEARIYVENEVEPIIFNTVVDPVLNAISLSSATP
Sequences:
>Translated_150_residues MSPPASVTLSVLDRLRGGEGPRVARIRDGIRQDLQDLLNTPNRVIGWSQALDQLETSILNYGIMDLCTANLSTEQQRAAV VEEIGRMIRLYEPRLSDMRIHALANADPSDRSLRLRIEARIYVENEVEPIIFNTVVDPVLNAISLSSATP >Mature_149_residues SPPASVTLSVLDRLRGGEGPRVARIRDGIRQDLQDLLNTPNRVIGWSQALDQLETSILNYGIMDLCTANLSTEQQRAAVV EEIGRMIRLYEPRLSDMRIHALANADPSDRSLRLRIEARIYVENEVEPIIFNTVVDPVLNAISLSSATP
Specific function: Unknown
COG id: COG3518
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16706; Mature: 16575
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPASVTLSVLDRLRGGEGPRVARIRDGIRQDLQDLLNTPNRVIGWSQALDQLETSILN CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YGIMDLCTANLSTEQQRAAVVEEIGRMIRLYEPRLSDMRIHALANADPSDRSLRLRIEAR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEEE IYVENEVEPIIFNTVVDPVLNAISLSSATP EEECCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SPPASVTLSVLDRLRGGEGPRVARIRDGIRQDLQDLLNTPNRVIGWSQALDQLETSILN CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YGIMDLCTANLSTEQQRAAVVEEIGRMIRLYEPRLSDMRIHALANADPSDRSLRLRIEAR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEEE IYVENEVEPIIFNTVVDPVLNAISLSSATP EEECCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA